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ATCC10864_003656-T1, ATCC10864_003656-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003656-T1
Unique NameATCC10864_003656-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:227521..228922-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003656-T1 ID=ATCC10864_003656-T1|Name=ATCC10864_003656-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1402bp|location=Sequence derived from alignment at MCQH01000068:227521..228922- (Aspergillus niger ATCC 10864)
ATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTTC
CGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGCC
CCGAAGAGTATCCTTGCTGCTCTCGTGCGTTGGTCCCTTTTCTAATATAG
CCCTATGTGGTATTACCCTCATCCGCTAATGCTTGTTTAGAATATGGACA
GTGCGGTACTGGTGCTTACTGCTTGGGTGGTTGCGACCCCATCTCGTCAT
ACTCTCTAGACTCTTGCGTTGGTGAGCCCGTGTGTGAGAGCAAGACCTAC
AAGTGGGACTCTCTCGATAGTGCCGCGCTGAACACCAAATACCTCGGAAA
TGCGTCCGAATACGACTGGGTCTACAGCGGCTACCCCAAGTTGGACGATG
GTAATCTTCTCCTCACGATGCCCAAGAACACCGTCGGTACGCTCTTTGCG
AACAACCACTACGTCTGGTACGGCAAGATTTCCGGCAAAGTCAAGAGCAG
CCGTGGTGCCGGTGTCGTCACGGCTTTTATCCTGCTTTCGGACGTCAAGG
ACGAGATCGACTTTGAGTGGATTGGTGCGGATCTGGTCAATGTCCAGACC
AACTATTACTGGCAGGGTGTTCTGAACTGTAAGCCTAACATCGTCCCGAA
GGCAATGCCCCAAACACGCTGCTAACATGCCTTGTGCAGACAACAACGGC
GATAAGGATGCAGTCAATGGAAGTGATACATTCGATGATTGGCATGAGTA
TGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGTGGATGGTGAGG
TGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAACTGCGAAGCGC
TACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCCCTGTGGCCCGC
CGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGCGGGTGGCGAAA
TCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACTACTATGCCACG
TTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAATGGCACTGTTTC
GAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGGGCTACAGCAAT
CGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTTTTGGCGCCACC
GGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGCAGTAACGGAAC
TAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAACGTACCCGGCA
GCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGATTCAGCCAGGGC
AGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAGCGAGTCATGAG
AGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCTGGTCGCTCTCT
AA
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Coding sequence (CDS) from alignment at MCQH01000068:227521..228922-

>ATCC10864_003656-T1 ID=ATCC10864_003656-T1|Name=ATCC10864_003656-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3825bp|location=Sequence derived from alignment at MCQH01000068:227521..228922- (Aspergillus niger ATCC 10864)
ACAACAACGGCGATAAGGATGCAGTCAATGGAAGTGATACATTCGATGAT
TGGCATGAGTATGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGT
GGATGGTGAGGTGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAA
CTGCGAAGCGCTACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCC
CTGTGGCCCGCCGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGC
GGGTGGCGAAATCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACT
ACTATGCCACGTTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAAT
GGCACTGTTTCGAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGG
GCTACAGCAATCGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTT
TTGGCGCCACCGGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGC
AGTAACGGAACTAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAA
CGTACCCGGCAGCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGAT
TCAGCCAGGGCAGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAG
CGAGTCATGAGAGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCT
GGTCGCTCTCTAAAATATGGACAGTGCGGTACTGGTGCTTACTGCTTGGG
TGGTTGCGACCCCATCTCGTCATACTCTCTAGACTCTTGCGTTGGTGAGC
CCGTGTGTGAGAGCAAGACCTACAAGTGGGACTCTCTCGATAGTGCCGCG
CTGAACACCAAATACCTCGGAAATGCGTCCGAATACGACTGGGTCTACAG
CGGCTACCCCAAGTTGGACGATGGTAATCTTCTCCTCACGATGCCCAAGA
ACACCGTCGGTACGCTCTTTGCGAACAACCACTACGTCTGGTACGGCAAG
ATTTCCGGCAAAGTCAAGAGCAGCCGTGGTGCCGGTGTCGTCACGGCTTT
TATCCTGCTTTCGGACGTCAAGGACGAGATCGACTTTGAGTGGATTGGTG
CGGATCTGGTCAATGTCCAGACCAACTATTACTGGCAGGGTGTTCTGAAC
TATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTT
CCGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGC
CCCGAAGAGTATCCTTGCTGCTCTCACAACAACGGCGATAAGGATGCAGT
CAATGGAAGTGATACATTCGATGATTGGCATGAGTATGAGATCGACTGGA
AGGAAGATGCGATTACCTGGTCGGTGGATGGTGAGGTGAAGCGGACTCTC
ACCAAGGAATCGACCTGGAACGAAACTGCGAAGCGCTACCAATACCCCCA
GTCCCCATCCAGAATGCAGCTTTCCCTGTGGCCCGCCGGCCAAGCCAGCA
ACGCACCAGGAACCATTGAGTGGGCGGGTGGCGAAATCGATTGGGACAGC
CAGGACATTAAAGACAAGGGTTACTACTATGCCACGTTTGGCGAGATCAC
TGTTCAGTGCTACGATGCCCCGAATGGCACTGTTTCGAACGGAAACAAGT
CGTACATGTTCACCAACAAGGATGGGCTACAGCAATCGGTTCAGATCACC
AACAATGACACCGTTCTTGCATCTTTTGGCGCCACCGGTCTCGACATGGA
TCTTGGTGCCAGCGACTCCAGCAGCAGTAACGGAACTAACGGCACGGTTC
CGGAGAACCAGGGAGGATCAGGAAACGTACCCGGCAGCAGCACCTCGAGT
GGCAGCTCCAGTACCTCTTCTGGATTCAGCCAGGGCAGCAGCACCGACAC
GAGTGGTGCTCCCTCCCAGAATGAGCGAGTCATGAGAGGCTCATTCTTTG
CTGCCTTGGTCGCAGTTGTCGTTCTGGTCGCTCTCTAAAATATGGACAGT
GCGGTACTGGTGCTTACTGCTTGGGTGGTTGCGACCCCATCTCGTCATAC
TCTCTAGACTCTTGCGTTGGTGAGCCCGTGTGTGAGAGCAAGACCTACAA
GTGGGACTCTCTCGATAGTGCCGCGCTGAACACCAAATACCTCGGAAATG
CGTCCGAATACGACTGGGTCTACAGCGGCTACCCCAAGTTGGACGATGGT
AATCTTCTCCTCACGATGCCCAAGAACACCGTCGGTACGCTCTTTGCGAA
CAACCACTACGTCTGGTACGGCAAGATTTCCGGCAAAGTCAAGAGCAGCC
GTGGTGCCGGTGTCGTCACGGCTTTTATCCTGCTTTCGGACGTCAAGGAC
GAGATCGACTTTGAGTGGATTGGTGCGGATCTGGTCAATGTCCAGACCAA
CTATTACTGGCAGGGTGTTCTGAACTATGGTGCGGTACACTTCTTCCATT
CTCTTGGCCTCGTTGGCCGCCACTTCCGTCTGGGCTACCTCGTCCCCTCC
TTCATGCAGTACCAGCTCTCAGTGCCCCGAAGAGTATCCTTGCTGCTCTC
ACAACAACGGCGATAAGGATGCAGTCAATGGAAGTGATACATTCGATGAT
TGGCATGAGTATGAGATCGACTGGAAGGAAGATGCGATTACCTGGTCGGT
GGATGGTGAGGTGAAGCGGACTCTCACCAAGGAATCGACCTGGAACGAAA
CTGCGAAGCGCTACCAATACCCCCAGTCCCCATCCAGAATGCAGCTTTCC
CTGTGGCCCGCCGGCCAAGCCAGCAACGCACCAGGAACCATTGAGTGGGC
GGGTGGCGAAATCGATTGGGACAGCCAGGACATTAAAGACAAGGGTTACT
ACTATGCCACGTTTGGCGAGATCACTGTTCAGTGCTACGATGCCCCGAAT
GGCACTGTTTCGAACGGAAACAAGTCGTACATGTTCACCAACAAGGATGG
GCTACAGCAATCGGTTCAGATCACCAACAATGACACCGTTCTTGCATCTT
TTGGCGCCACCGGTCTCGACATGGATCTTGGTGCCAGCGACTCCAGCAGC
AGTAACGGAACTAACGGCACGGTTCCGGAGAACCAGGGAGGATCAGGAAA
CGTACCCGGCAGCAGCACCTCGAGTGGCAGCTCCAGTACCTCTTCTGGAT
TCAGCCAGGGCAGCAGCACCGACACGAGTGGTGCTCCCTCCCAGAATGAG
CGAGTCATGAGAGGCTCATTCTTTGCTGCCTTGGTCGCAGTTGTCGTTCT
GGTCGCTCTCTAAAATATGGACAGTGCGGTACTGGTGCTTACTGCTTGGG
TGGTTGCGACCCCATCTCGTCATACTCTCTAGACTCTTGCGTTGGTGAGC
CCGTGTGTGAGAGCAAGACCTACAAGTGGGACTCTCTCGATAGTGCCGCG
CTGAACACCAAATACCTCGGAAATGCGTCCGAATACGACTGGGTCTACAG
CGGCTACCCCAAGTTGGACGATGGTAATCTTCTCCTCACGATGCCCAAGA
ACACCGTCGGTACGCTCTTTGCGAACAACCACTACGTCTGGTACGGCAAG
ATTTCCGGCAAAGTCAAGAGCAGCCGTGGTGCCGGTGTCGTCACGGCTTT
TATCCTGCTTTCGGACGTCAAGGACGAGATCGACTTTGAGTGGATTGGTG
CGGATCTGGTCAATGTCCAGACCAACTATTACTGGCAGGGTGTTCTGAAC
TATGGTGCGGTACACTTCTTCCATTCTCTTGGCCTCGTTGGCCGCCACTT
CCGTCTGGGCTACCTCGTCCCCTCCTTCATGCAGTACCAGCTCTCAGTGC
CCCGAAGAGTATCCTTGCTGCTCTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0071555cell wall organization
GO:0005975carbohydrate metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRF2ATCC10864_003656Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003656-T1ATCC10864_003656-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003656-T1.cdsATCC10864_003656-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003656-T1.exon3ATCC10864_003656-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003656-T1.exon2ATCC10864_003656-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003656-T1.exon1ATCC10864_003656-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00722
InterProIPR017168
InterProIPR000757
InterProIPR013320
Properties
Property NameValue
NoteCAZy:GH16
NoteSECRETED:SignalP(1-20)
ProductPutative glycosidase crf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:227521..228922 -
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