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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000068:249140..250452- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003663-T1 ID=ATCC10864_003663-T1|Name=ATCC10864_003663-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1313bp|location=Sequence derived from alignment at MCQH01000068:249140..250452- (Aspergillus niger ATCC 10864)
ATGTTGCCCAGCAGCAGCAGCAGCCACCAGCACCGATTCCGCCTCAATGG
TAAACCAGTCCTATCCCAGCGCGAGAAACTCATACAAAAGATCGAAGCCG
GAGTCCAACGAAAGGCTCACTTCAAATCACGAAACGGATGCGCCGCATGC
AAGCAGAAACGAGTGAAATGCGACGAAGTCAAGCCAATATGTGGGAAATG
CGCCGCAAAGGGGACGACAGCAGCCTGTCAGTACAACAACAATAACAACG
ACGGTGAACAATCCCAGCAGAAATTACCAATATACCAAATCCAACCCAAA
TCCTTAACCCTAGCTGGCATCAATCAACTCGCCAACACCATCATTCCGGC
AGAGCTCCTCCTCCATCATTTCTATACCCACACCAGCCAACGCTTGATGG
GCGGGGAAAAGCGACAATCCATATACAGATACCATATGCTTCCGCTGTCG
ATTTCACAGCATTCGCTGCTTCATGCTATTTTGGCTGTGTCGGCGAGGGA
TCTGCTCTACCTACATCGCCATCATCAGGACTGCCAGCATGGTTACCAAC
AAATAAAAGAGCAACAGAAACTCGAGCTATCATTCTACCACCACTACCAC
CGCTTCGCAACCCTCTACAAAGACGACCTCCTCCGCCCACCATCTACCGA
AACAACTAACCTAGCTCACTCGAACGCATTTCTCATGAACGTCCTAGTCG
TCGCAGATCCAGCGTGTACCTCCTCCTCCACATCAAACTCATGGGTCACA
AGAAAAGCCAAAGACAACATCGACGCCGCATTCTCATGGATCAAAGTCCA
AGCTATTCATCAGACGATTCTAAAGCCCTATTGGGAATTTGTGCCCAGTA
CATTCTGGTATTCTGTTTTTGTGGACGATCATCACCAGCAGAAGGACGAC
CAAGAACAAGAAGAACCCTCCGTAAATACAACTACCGGCATAAGGAATAT
CATCATCGATCATCTCGCTATTATATGTGCTATTGAAGAAACATCTACTA
CGACGCCGGAAAGGAACGTCTATCTCTCCGCGTATAAGAATCTATGCTCT
ATCCTCACTACACCTATCCCTCGTACATCTCGAACACCAGCTCTCTCAGC
TCAAACTTTCGGCACATACATCAAATTCATGATAGAGTTAAATGCACACT
TTGTGAATATACTTCGCTCTAAGGGTGAACCTGCGCTGCTAATGTTCAGC
ATCTGGTTAAATCGGATGAGAAGGTTAGATCTATGGTGGATGAACGAGAG
GGCGGGGAGTGAATGTGCCGCTATTTGGGAGTTTTTGGAGAGTAGTATTA
ACTTGAGAGTTAG back to topCoding sequence (CDS) from alignment at MCQH01000068:249140..250452- >ATCC10864_003663-T1 ID=ATCC10864_003663-T1|Name=ATCC10864_003663-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2454bp|location=Sequence derived from alignment at MCQH01000068:249140..250452- (Aspergillus niger ATCC 10864)
TTAGATGTTGCCCAGCAGCAGCAGCAGCCACCAGCACCGATTCCGCCTCA
ATGGTAAACCAGTCCTATCCCAGCGCGAGAAACTCATACAAAAGATCGAA
GCCGGAGTCCAACGAAAGGCTCACTTCAAATCACGAAACGGATGCGCCGC
ATGCAAGCAGAAACGAGTGAAATGCGACGAAGTCAAGCCAATATGTGGGA
AATGCGCCGCAAAGGGGACGACAGCAGCCTGTCAGTACAACAACAATAAC
AACGACGGTGAACAATCCCAGCAGAAATTACCAATATACCAAATCCAACC
CAAATCCTTAACCCTAGCTGGCATCAATCAACTCGCCAACACCATCATTC
CGGCAGAGCTCCTCCTCCATCATTTCTATACCCACACCAGCCAACGCTTG
ATGGGCGGGGAAAAGCGACAATCCATATACAGATACCATATGCTTCCGCT
GTCGATTTCACAGCATTCGCTGCTTCATGCTATTTTGGCTGTGTCGGCGA
GGGATCTGCTCTACCTACATCGCCATCATCAGGACTGCCAGCATGGTTAC
CAACAAATAAAAGAGCAACAGAAACTCGAGCTATCATTCTACCACCACTA
CCACCGCTTCGCAACCCTCTACAAAGACGACCTCCTCCGCCCACCATCTA
CCGAAACAACTAACCTAGCTCACTCGAACGCATTTCTCATGAACGTCCTA
GTCGTCGCAGATCCAGCGTGTACCTCCTCCTCCACATCAAACTCATGGGT
CACAAGAAAAGCCAAAGACAACATCGACGCCGCATTCTCATGGATCAAAG
TCCAAGCTATTCATCAGACGATTCTAAAGCCCTATTGGGAATTTGTGCCC
AGTACATTCTGGTATTCTGTTTTTGTGGACGATCATCACCAGCAGAAGGA
CGACCAAGAACAAGAAGAACCCTCCGTAAATACAACTACCGGCATAAGGA
ATATCATCATCGATCATCTCGCTATTATATGTGCTATTGAAGAAACATCT
ACTACGACGCCGGAAAGGAACGTCTATCTCTCCGCGTATAAGAATCTATG
CTCTATCCTCACTACACCTATCCCTCGTACATCTCGAACACCAGCTCTCT
CAGCTCAAACTTTCGGCACATACATCAAATTCATGATAGAGTTAAATGCA
CACTTTGTGAATATACTTCGCTCTAAGGGTGAACCTGCGCTGCTAATGTT
CAGCATCTGGTTAAATCGGATGAGAAGTTAGATGTTGCCCAGCAGCAGCA
GCAGCCACCAGCACCGATTCCGCCTCAATGGTAAACCAGTCCTATCCCAG
CGCGAGAAACTCATACAAAAGATCGAAGCCGGAGTCCAACGAAAGGCTCA
CTTCAAATCACGAAACGGATGCGCCGCATGCAAGCAGAAACGAGTGAAAT
GCGACGAAGTCAAGCCAATATGTGGGAAATGCGCCGCAAAGGGGACGACA
GCAGCCTGTCAGTACAACAACAATAACAACGACGGTGAACAATCCCAGCA
GAAATTACCAATATACCAAATCCAACCCAAATCCTTAACCCTAGCTGGCA
TCAATCAACTCGCCAACACCATCATTCCGGCAGAGCTCCTCCTCCATCAT
TTCTATACCCACACCAGCCAACGCTTGATGGGCGGGGAAAAGCGACAATC
CATATACAGATACCATATGCTTCCGCTGTCGATTTCACAGCATTCGCTGC
TTCATGCTATTTTGGCTGTGTCGGCGAGGGATCTGCTCTACCTACATCGC
CATCATCAGGACTGCCAGCATGGTTACCAACAAATAAAAGAGCAACAGAA
ACTCGAGCTATCATTCTACCACCACTACCACCGCTTCGCAACCCTCTACA
AAGACGACCTCCTCCGCCCACCATCTACCGAAACAACTAACCTAGCTCAC
TCGAACGCATTTCTCATGAACGTCCTAGTCGTCGCAGATCCAGCGTGTAC
CTCCTCCTCCACATCAAACTCATGGGTCACAAGAAAAGCCAAAGACAACA
TCGACGCCGCATTCTCATGGATCAAAGTCCAAGCTATTCATCAGACGATT
CTAAAGCCCTATTGGGAATTTGTGCCCAGTACATTCTGGTATTCTGTTTT
TGTGGACGATCATCACCAGCAGAAGGACGACCAAGAACAAGAAGAACCCT
CCGTAAATACAACTACCGGCATAAGGAATATCATCATCGATCATCTCGCT
ATTATATGTGCTATTGAAGAAACATCTACTACGACGCCGGAAAGGAACGT
CTATCTCTCCGCGTATAAGAATCTATGCTCTATCCTCACTACACCTATCC
CTCGTACATCTCGAACACCAGCTCTCTCAGCTCAAACTTTCGGCACATAC
ATCAAATTCATGATAGAGTTAAATGCACACTTTGTGAATATACTTCGCTC
TAAGGGTGAACCTGCGCTGCTAATGTTCAGCATCTGGTTAAATCGGATGA
GAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001138 |
| PFAM | PF00172 |
| InterPro | IPR021858 |
| InterPro | IPR036864 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000068 | supercontig | MCQH01000068:249140..250452 - |
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