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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000068:268748..269360+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003670-T1 ID=ATCC10864_003670-T1|Name=ATCC10864_003670-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=613bp|location=Sequence derived from alignment at MCQH01000068:268748..269360+ (Aspergillus niger ATCC 10864)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGTAGGTGTCTTTAGCTCTTCATCAACGTGGGAATTCATTCTATGATTA
TGCTGGAACTATTTCCATGCTCAATCTTGATAAAGTATACTGCTACTGAG
CATAAGATGAGATACTAAGTGGCTTTTGTCAGGGTTACGCGTTGATCGAA
TACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGGATC
CAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTGAGGCCAC
CCCCATCAAACAAAGGAAAGAATGCTGGACAAAGAGGTGGCCGTGGTGGA
CGGGGACGCAGCAGGAGCCGTGATAGGAGTCGCAGCCCTGGAGCGGAGGA
GGCTAGAGACTAG back to topCoding sequence (CDS) from alignment at MCQH01000068:268748..269360+ >ATCC10864_003670-T1 ID=ATCC10864_003670-T1|Name=ATCC10864_003670-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=966bp|location=Sequence derived from alignment at MCQH01000068:268748..269360+ (Aspergillus niger ATCC 10864)
ATGTCTACAGAAATGGAAGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGT
CCCCGCGCAGTCGGGCAACAATACCTCTGATCCGAGAACGCAAGCGTCAG
CTGTTGCAGTGCGCAGTATCGAAGGATGGATCATCATCGCGACCAATATT
CATGAAGAGGCCTCTGAGGAGGACGTGACGGATCTGTTTGCTGAATATGG
AGAGATCAAGAACTTCAATTTGAACCTCGATCGCCGGACGGGTTATGTGA
AGGGTTACGCGTTGATCGAATACTCCACCCTCCCCGAAGCCTCGGAAGCC
ATCAAGGCTTTGAACGGATCCAAATTGCTGGACCAGACAATCCAGGTCGA
CTTCGCGTTTGTGAGGCCACCCCCATCAAACAAAGGAAAGAATGCTGGAC
AAAGAGGTGGCCGTGGTGGACGGGGACGCAGCAGGAGCCGTGATAGGAGT
CGCAGCCCTGGAGCGGAGGAGGCTAGAGACTAGATGTCTACAGAAATGGA
AGTCGACCCTCCCGTGGCGCAGGAGGAGGAGGTCCCCGCGCAGTCGGGCA
ACAATACCTCTGATCCGAGAACGCAAGCGTCAGCTGTTGCAGTGCGCAGT
ATCGAAGGATGGATCATCATCGCGACCAATATTCATGAAGAGGCCTCTGA
GGAGGACGTGACGGATCTGTTTGCTGAATATGGAGAGATCAAGAACTTCA
ATTTGAACCTCGATCGCCGGACGGGTTATGTGAAGGGTTACGCGTTGATC
GAATACTCCACCCTCCCCGAAGCCTCGGAAGCCATCAAGGCTTTGAACGG
ATCCAAATTGCTGGACCAGACAATCCAGGTCGACTTCGCGTTTGTGAGGC
CACCCCCATCAAACAAAGGAAAGAATGCTGGACAAAGAGGTGGCCGTGGT
GGACGGGGACGCAGCAGGAGCCGTGATAGGAGTCGCAGCCCTGGAGCGGA
GGAGGCTAGAGACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003729 | mRNA binding |
| GO:0003676 | nucleic acid binding |
| GO:0003723 | RNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0005634 | nucleus |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR008111 |
| InterPro | IPR012677 |
| InterPro | IPR033744 |
| PFAM | PF00076 |
| InterPro | IPR000504 |
| InterPro | IPR035979 |
Properties
| Property Name | Value |
|---|
| Product | RNA-binding protein 8A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000068 | supercontig | MCQH01000068:268748..269360 + |
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