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ATCC10864_003710-T1, ATCC10864_003710-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003710-T1
Unique NameATCC10864_003710-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:398428..399423+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003710-T1 ID=ATCC10864_003710-T1|Name=ATCC10864_003710-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=996bp|location=Sequence derived from alignment at MCQH01000068:398428..399423+ (Aspergillus niger ATCC 10864)
ATGGTCAAGAAGAGGGCGAACAAGTAAGACCGAACCCTTTCCTATCCCAC
CCATCCATGCCATGCCACATGCCATGTATACATATACACAATCTACGCAC
ACCTGAATGAAGACGGCCGCACGGAAAAATATTCGCCATACATTTGCCGC
AGAATGGCCCGGCTACCGTACAGTGTTGTGTGTGATTTTGGGGAAAAAAC
AGAAGAAAATTGAAGAAATGGCGATGTTCAAATCGAAAACATGGAAAATT
CGCAAAATTAAAGAAGAGACCGATAAACTAACCTATTTCACAGCGGTCGT
AACAAGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGC
TCGCTGCACTCCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACA
TGGTCGAGTCCGCTGCCATCCGTACGTTCCACGATCTTGCTCCATTGATC
TGAGTTCTTCCCGAAACCGTCCGCGCGCGCTGTTTGTTCATTCCGAAAGA
GCTGGGAAGTGGGGTGTTTTATGTATGCGTGTGCGTATGCGTGTGTATGC
AACAATTCGAAGCGAAATGAACTCGACCGGAATACGACATCGGATAAGAA
GAAAGAGGAATAGATACAACAGCGCGACGCACGAGTGAACGGAATTCGAC
CCATCCTGAAAGACAACATCGGACTGACTGGTTCTTTTTCCAACTCTCCA
GGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCGTCCCCAAGAT
GTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCACGGCAAGATTG
TTCGGTACGCCACCACCCACTCAACAACGATGAATGCGTCGAATCATCAT
CGATTTCGAGAACAAACACAAGCTAATGATTATCCTATAGTGTCCGCTCC
CGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCTCGTATCAGGTACAACAA
GGATGGCAAGAAGCTGAACCCCCCTCAGGCCGCCAAGGCTATGTAA
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Coding sequence (CDS) from alignment at MCQH01000068:398428..399423+

>ATCC10864_003710-T1 ID=ATCC10864_003710-T1|Name=ATCC10864_003710-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1440bp|location=Sequence derived from alignment at MCQH01000068:398428..399423+ (Aspergillus niger ATCC 10864)
ATGGTCAAGAAGAGGGCGAACAACGGTCGTAACAAGAACGGCCGCGGCCA
CGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACTCCCAAGGACA
AGGCCATCAAGAGATTCACCATCCGCAACATGGTCGAGTCCGCTGCCATC
CGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCGTCCCCAAGAT
GTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCACGGCAAGATTG
TTCGTGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCCCCCTCCTCGT
ATCAGGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTCAGGCCGCCAA
GGCTATGTAAATGGTCAAGAAGAGGGCGAACAACGGTCGTAACAAGAACG
GCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGCTCGCTGCACT
CCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACATGGTCGAGTC
CGCTGCCATCCGTGATATCTCGGACGCCTCCGTCTTCACCGACTACGCCG
TCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTGCGCTATCCAC
GGCAAGATTGTTCGTGTCCGCTCCCGGGAAGGTCGTCGCAACCGTGCTCC
CCCTCCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTGAACCCCCCTC
AGGCCGCCAAGGCTATGTAAATGGTCAAGAAGAGGGCGAACAACGGTCGT
AACAAGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCTCCAACTGCGC
TCGCTGCACTCCCAAGGACAAGGCCATCAAGAGATTCACCATCCGCAACA
TGGTCGAGTCCGCTGCCATCCGTGATATCTCGGACGCCTCCGTCTTCACC
GACTACGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGCGTCTCCTG
CGCTATCCACGGCAAGATTGTTCGTGTCCGCTCCCGGGAAGGTCGTCGCA
ACCGTGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGGCAAGAAGCTG
AACCCCCCTCAGGCCGCCAAGGCTATGTAAATGGTCAAGAAGAGGGCGAA
CAACGGTCGTAACAAGAACGGCCGCGGCCACGTCAAGCCCGTGCGCTGCT
CCAACTGCGCTCGCTGCACTCCCAAGGACAAGGCCATCAAGAGATTCACC
ATCCGCAACATGGTCGAGTCCGCTGCCATCCGTGATATCTCGGACGCCTC
CGTCTTCACCGACTACGCCGTCCCCAAGATGTACCTGAAGCTGCAGTACT
GCGTCTCCTGCGCTATCCACGGCAAGATTGTTCGTGTCCGCTCCCGGGAA
GGTCGTCGCAACCGTGCTCCCCCTCCTCGTATCAGGTACAACAAGGATGG
CAAGAAGCTGAACCCCCCTCAGGCCGCCAAGGCTATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS26ATCC10864_003710Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003710-T1.exon1ATCC10864_003710-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003710-T1.exon2ATCC10864_003710-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003710-T1.exon3ATCC10864_003710-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003710-T1.exon4ATCC10864_003710-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003710-T1.cdsATCC10864_003710-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003710-T1ATCC10864_003710-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01283
InterProIPR038551
InterProIPR000892
Properties
Property NameValue
NoteBUSCO:EOG09265GYK
Product40S ribosomal protein S26
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:398428..399423 +
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