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ATCC10864_003755-T1, ATCC10864_003755-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003755-T1
Unique NameATCC10864_003755-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:529435..530979-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003755-T1 ID=ATCC10864_003755-T1|Name=ATCC10864_003755-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1545bp|location=Sequence derived from alignment at MCQH01000068:529435..530979- (Aspergillus niger ATCC 10864)
ATGTCGACCTTGGAAGACCTCGACGACCTTGAGCGTGAGCAGAGAGACAA
GAAGAAGGACCAAGGAGATGACGGTGACGGCAGGAAGCCCGAAGGTGAAG
GAGATGCTGATATGAAAGATGCCGATGCCAAGAGAGATGAGGATGATGGA
CTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGCGGACATCGTCAAGCG
ACGGCGGATGCTGGAGAACGAGCTGCGTATAATGAAGAGCGAATACCAGC
GCCTGACTCACGAGCAAAACACGATGCGAGAGAAAGTCAAGGATAACCAA
GAAAAGATCGAGAACAACAGGTAAGCTCCGGTTGTCTTCCGTTCCGCCAG
CGCCTGTTCGACGCGGTGGCAATTGCGGCGTAAGCCGGGTCTTTTACTGA
CTGTCCGTCTGCTAGGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGC
TTTTGGATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATT
GACCTTGATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGAC
CCGCCAGACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGC
TGAAGCCTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTG
GATACGCTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGA
TGAGAAGCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAA
TCGAGGAAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGG
TTCAAGAAGCTTGGCATTAAGGCACCGAAAGGTATGTAATCGTGGATTTC
CCAGCCTAGCACGGGTCTTCTGACACACTTTCACAGGTGCTCTAATGTAT
GGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAGCAGA
GACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAGATGT
TCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGCCAAG
GAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCGGTAC
GAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGAACCA
TGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCGCATC
AAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCCTGCT
CCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAACGAGG
AGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGTGGAT
GACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTGGCGG
TGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTCCGGA
AGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTCGGAA
GTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAA
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Coding sequence (CDS) from alignment at MCQH01000068:529435..530979-

>ATCC10864_003755-T1 ID=ATCC10864_003755-T1|Name=ATCC10864_003755-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4185bp|location=Sequence derived from alignment at MCQH01000068:529435..530979- (Aspergillus niger ATCC 10864)
GTGCTCTAATGTATGGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGA
GCCTGTGCAGCAGAGACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCA
GTTGGTGCAGATGTTCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCT
TCGCCCTTGCCAAGGAGAAGGCACCTTCCATCATCTTCATCGACGAGCTG
GATGCGGTCGGTACGAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGA
AGTGCAGCGAACCATGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCT
CGGACGATCGCATCAAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTC
GATCCCGCCCTGCTCCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCC
GCTACCCAACGAGGAGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCA
AAATGGCTGTGGATGACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACC
GACGAGTTTGGCGGTGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTAT
GATTGCTCTCCGGAAGGGCATGAGCAAGGTAGGACACGAGAACTACGTGG
ATGCCATTTCGGAAGTACAGGCAAAGAAGAAGGACACGAACATGGGTATC
TATGTCTAAGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTGG
ATTTGGATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCTT
GATGCTACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCCA
GACTATCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAGC
CTGGTGATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATACG
CTACCTGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGAA
GCCGACGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAGG
AAATTGTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAAG
AAGCTTGGCATTAAGGCACCGAAAGATGTCGACCTTGGAAGACCTCGACG
ACCTTGAGCGTGAGCAGAGAGACAAGAAGAAGGACCAAGGAGATGACGGT
GACGGCAGGAAGCCCGAAGGTGAAGGAGATGCTGATATGAAAGATGCCGA
TGCCAAGAGAGATGAGGATGATGGACTCTTGGACGAGGAGATCCTTAGCT
CGAGCACAGCGGACATCGTCAAGCGACGGCGGATGCTGGAGAACGAGCTG
CGTATAATGAAGAGCGAATACCAGCGCCTGACTCACGAGCAAAACACGAT
GCGAGAGAAAGTCAAGGATAACCAAGAAAAGATCGAGAACAACAGGTGCT
CTAATGTATGGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTG
TGCAGCAGAGACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGG
TGCAGATGTTCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCC
CTTGCCAAGGAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGC
GGTCGGTACGAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGC
AGCGAACCATGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGAC
GATCGCATCAAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCC
CGCCCTGCTCCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTAC
CCAACGAGGAGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATG
GCTGTGGATGACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGA
GTTTGGCGGTGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTG
CTCTCCGGAAGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCC
ATTTCGGAAGTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGT
CTAAGCAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTGGATTTG
GATGTTGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCTTGATGC
TACACGGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCCAGACTA
TCTATCTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAGCCTGGT
GATCTGATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATACGCTACC
TGCCGAGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGAAGCCGA
CGGAGAAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAGGAAATT
GTGGAGGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAAGAAGCT
TGGCATTAAGGCACCGAAAGATGTCGACCTTGGAAGACCTCGACGACCTT
GAGCGTGAGCAGAGAGACAAGAAGAAGGACCAAGGAGATGACGGTGACGG
CAGGAAGCCCGAAGGTGAAGGAGATGCTGATATGAAAGATGCCGATGCCA
AGAGAGATGAGGATGATGGACTCTTGGACGAGGAGATCCTTAGCTCGAGC
ACAGCGGACATCGTCAAGCGACGGCGGATGCTGGAGAACGAGCTGCGTAT
AATGAAGAGCGAATACCAGCGCCTGACTCACGAGCAAAACACGATGCGAG
AGAAAGTCAAGGATAACCAAGAAAAGATCGAGAACAACAGGTGCTCTAAT
GTATGGGCCGCCCGGTACTGGTAAAACACTTCTTGCCCGAGCCTGTGCAG
CAGAGACGAACGCCACTTTCCTCAAGCTTGCCGGTCCGCAGTTGGTGCAG
ATGTTCATCGGTGATGGTGCGAAACTCGTTCGTGACTGCTTCGCCCTTGC
CAAGGAGAAGGCACCTTCCATCATCTTCATCGACGAGCTGGATGCGGTCG
GTACGAAGCGGTTCGACTCCGAGAAGTCCGGTGACCGTGAAGTGCAGCGA
ACCATGCTTGAACTTCTCAACCAGCTCGACGGATTTGCCTCGGACGATCG
CATCAAGGTTCTCGCGGCCACGAATCGTGTCGACGTTCTCGATCCCGCCC
TGCTCCGTTCCGGTCGTCTGGACCGCAAGATCGAGTTCCCGCTACCCAAC
GAGGAGGCGAGAGCCAACATCCTGCAGATTCACTCCCGCAAAATGGCTGT
GGATGACCGGGTTAACTGGGCGGAACTGGCCCGCAGTACCGACGAGTTTG
GCGGTGCTCAGCTGAAGGCCGTGTGCGTGGAGGCAGGTATGATTGCTCTC
CGGAAGGGCATGAGCAAGGTAGGACACGAGAACTACGTGGATGCCATTTC
GGAAGTACAGGCAAAGAAGAAGGACACGAACATGGGTATCTATGTCTAAG
CAATTACCCTACCTGGTCGGAAACGTCGTCGAGCTTTTGGATTTGGATGT
TGAAGCTGAGGCGGCTGAGGAGGGGGCGAACATTGACCTTGATGCTACAC
GGGTGGGCAAGTCGGCTGTCATCAAGACGTCGACCCGCCAGACTATCTAT
CTTCCTCTCATTGGTCTAGTAGATCACGAGAAGCTGAAGCCTGGTGATCT
GATCGGTGTCAACAAGGACTCATACCTCGTCCTGGATACGCTACCTGCCG
AGTACGATAACCGTGTCAAGGCCATGGAGGTCGATGAGAAGCCGACGGAG
AAGTACACCGACATTGGTGGTTTGGATAAGCAAATCGAGGAAATTGTGGA
GGCTATCGTATGGCCTATGAAGGAAGCTGACAGGTTCAAGAAGCTTGGCA
TTAAGGCACCGAAAGATGTCGACCTTGGAAGACCTCGACGACCTTGAGCG
TGAGCAGAGAGACAAGAAGAAGGACCAAGGAGATGACGGTGACGGCAGGA
AGCCCGAAGGTGAAGGAGATGCTGATATGAAAGATGCCGATGCCAAGAGA
GATGAGGATGATGGACTCTTGGACGAGGAGATCCTTAGCTCGAGCACAGC
GGACATCGTCAAGCGACGGCGGATGCTGGAGAACGAGCTGCGTATAATGA
AGAGCGAATACCAGCGCCTGACTCACGAGCAAAACACGATGCGAGAGAAA
GTCAAGGATAACCAAGAAAAGATCGAGAACAACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016887ATPase activity
GO:0036402proteasome-activating ATPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT5ATCC10864_003755Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003755-T1ATCC10864_003755-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003755-T1.cdsATCC10864_003755-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003755-T1.exon3ATCC10864_003755-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003755-T1.exon2ATCC10864_003755-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003755-T1.exon1ATCC10864_003755-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR032501
InterProIPR041569
InterProIPR035254
PFAMPF00004
InterProIPR027417
InterProIPR005937
PFAMPF17862
PFAMPF16450
InterProIPR003959
InterProIPR003960
InterProIPR003593
Properties
Property NameValue
Product26S proteasome regulatory subunit 6A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:529435..530979 -
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