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ATCC10864_003762-T1, ATCC10864_003762-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003762-T1
Unique NameATCC10864_003762-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:544023..545453+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003762-T1 ID=ATCC10864_003762-T1|Name=ATCC10864_003762-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1431bp|location=Sequence derived from alignment at MCQH01000068:544023..545453+ (Aspergillus niger ATCC 10864)
ATGGCGAAGGCACGTACTAAGAAGCGCACTCATGTTCGCGCGCAAAATGC
CACGGCTGCTGCTGCCAAAGGCGGCGCCGCATCTATGAGCAAGACTCCGA
AGTCGATGGTTATCCGCGTCGGCGCTTCAGAAGTCGGTGCTAGTGTGAGC
CAGTTGGTCAAAGATGTGCGAACGATGATGGAGCCGGATACGGCTGTGAG
ATTGAAGGTGAGCTTTGAATTCTTTCCCGTTCTCAGCTGGACTACGACTA
ATGGTATTGGATTTTAGGAACGCAAATCAAACAGACTAAGGGATTACACG
ACTATGACTGGTCCCCTTGGAGTCACACATCTTATGCTTTTCTCCAAGTC
GGCGACTGGAAACACGAATATGCGTTTGGCGCTTACGCCCCGGGGTCCGA
CTTTGCACTTCCAGGTGGAAAACTACTCCCTATGCCGTGATGTTGAGAAA
GCTTTGAAGCGCCCGAGAGGTGGTGGTCAGGATCACAAGACGCCTCCTTT
GCTGGTCATGAACAACTTCAACTCTCCCAACGCCACTGAGGACTCTAAGG
TACCTAAGCGTCTGGAGAGTCTCTCAACGACCATCTTCCAATCTCTCTTC
CCCCCGATCAACCCTCAAGCCACTCCCCTCTCCTCCATTCGCCGTGTAAT
GCTCTTGAACCGTGAACTCGCCCCCGAGGGTGAGGAAGAAGAACACTATG
TGTTGAACCTCCGTCATTACGCCATTACTACGAAGAAGACCGGTGTTTCG
AAACGCATTCGCCGTCTTGATCCCAAGGAAATCCGGAACAGGGAGAAGAA
GGGAGCTGCTGTGCCCAACCTGGGTAAGCTGGAGGATGCGGCGGATTATC
TGCTGGATCCGTCGGCTGCTGGGTATACCTCGGCCAGTGAAACGGAAATG
GACACGGATGCTGAAGTTGAGGTGGCGGAGAGCACCACGAAGAAGGTTCT
CTCGAAGCGTGAACTGCAGCGCATGAAGGCTGGAGAGAAGGAGAAGGCAC
AGAAGAAGCTGAGCAATGCTCCAGGAGTCGAGAAGCGGGCGGTCAAGTTG
GTTGAGCTGGGCCCTCGTATGAAGCTTCGCTTGCTTAAGGTTGAAGAAGG
CCTCTGCGAAGGTCGCGTGATGTGGCACGATTTCATCAAGAAGTCTGAGG
ATGAAGTCACCAAATTGGACAAGAACTGGGACCAGAAGAAGAAGGAGAAG
GAGCAAAGAAAGAAGGAACAAAAGGCAAACATTGAGAAGAAGAAGCAAGC
CAAGGCTCAAGCTAAAGCCGAAGGCAAGGAGGTTAAAGACGACGATGAAG
ACGATGTTGATATGGATGACGAGGACGAATGGCTCAGTGATGACTTCGAA
GATGACAATGCGGAGGAGCAGGAGAACGATGATGAGGATGAGGATGAGGT
TGAGGACGAGGACGAATCGATGGAGGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000068:544023..545453+

>ATCC10864_003762-T1 ID=ATCC10864_003762-T1|Name=ATCC10864_003762-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2742bp|location=Sequence derived from alignment at MCQH01000068:544023..545453+ (Aspergillus niger ATCC 10864)
ATGGCGAAGGCACGTACTAAGAAGCGCACTCATGTTCGCGCGCAAAATGC
CACGGCTGCTGCTGCCAAAGGCGGCGCCGCATCTATGAGCAAGACTCCGA
AGTCGATGGTTATCCGCGTCGGCGCTTCAGAAGTCGGTGCTAGTGTGAGC
CAGTTGGTCAAAGATGTGCGAACGATGATGGAGCCGGATACGGCTGTGAG
ATTGAAGGAACGCAAATCAAACAGACTAAGGGATTACACGACTATGACTG
GTCCCCTTGGAGTCACACATCTTATGCTTTTCTCCAAGTCGGCGACTGGA
AACACGAATATGCGTTTGGCGCTTACGCCCCGGGGTCCGACTTTGCACTT
CCAGGTGGAAAACTACTCCCTATGCCGTGATGTTGAGAAAGCTTTGAAGC
GCCCGAGAGGTGGTGGTCAGGATCACAAGACGCCTCCTTTGCTGGTCATG
AACAACTTCAACTCTCCCAACGCCACTGAGGACTCTAAGGTACCTAAGCG
TCTGGAGAGTCTCTCAACGACCATCTTCCAATCTCTCTTCCCCCCGATCA
ACCCTCAAGCCACTCCCCTCTCCTCCATTCGCCGTGTAATGCTCTTGAAC
CGTGAACTCGCCCCCGAGGGTGAGGAAGAAGAACACTATGTGTTGAACCT
CCGTCATTACGCCATTACTACGAAGAAGACCGGTGTTTCGAAACGCATTC
GCCGTCTTGATCCCAAGGAAATCCGGAACAGGGAGAAGAAGGGAGCTGCT
GTGCCCAACCTGGGTAAGCTGGAGGATGCGGCGGATTATCTGCTGGATCC
GTCGGCTGCTGGGTATACCTCGGCCAGTGAAACGGAAATGGACACGGATG
CTGAAGTTGAGGTGGCGGAGAGCACCACGAAGAAGGTTCTCTCGAAGCGT
GAACTGCAGCGCATGAAGGCTGGAGAGAAGGAGAAGGCACAGAAGAAGCT
GAGCAATGCTCCAGGAGTCGAGAAGCGGGCGGTCAAGTTGGTTGAGCTGG
GCCCTCGTATGAAGCTTCGCTTGCTTAAGGTTGAAGAAGGCCTCTGCGAA
GGTCGCGTGATGTGGCACGATTTCATCAAGAAGTCTGAGGATGAAGTCAC
CAAATTGGACAAGAACTGGGACCAGAAGAAGAAGGAGAAGGAGCAAAGAA
AGAAGGAACAAAAGGCAAACATTGAGAAGAAGAAGCAAGCCAAGGCTCAA
GCTAAAGCCGAAGGCAAGGAGGTTAAAGACGACGATGAAGACGATGTTGA
TATGGATGACGAGGACGAATGGCTCAGTGATGACTTCGAAGATGACAATG
CGGAGGAGCAGGAGAACGATGATGAGGATGAGGATGAGGTTGAGGACGAG
GACGAATCGATGGAGGAGTAAATGGCGAAGGCACGTACTAAGAAGCGCAC
TCATGTTCGCGCGCAAAATGCCACGGCTGCTGCTGCCAAAGGCGGCGCCG
CATCTATGAGCAAGACTCCGAAGTCGATGGTTATCCGCGTCGGCGCTTCA
GAAGTCGGTGCTAGTGTGAGCCAGTTGGTCAAAGATGTGCGAACGATGAT
GGAGCCGGATACGGCTGTGAGATTGAAGGAACGCAAATCAAACAGACTAA
GGGATTACACGACTATGACTGGTCCCCTTGGAGTCACACATCTTATGCTT
TTCTCCAAGTCGGCGACTGGAAACACGAATATGCGTTTGGCGCTTACGCC
CCGGGGTCCGACTTTGCACTTCCAGGTGGAAAACTACTCCCTATGCCGTG
ATGTTGAGAAAGCTTTGAAGCGCCCGAGAGGTGGTGGTCAGGATCACAAG
ACGCCTCCTTTGCTGGTCATGAACAACTTCAACTCTCCCAACGCCACTGA
GGACTCTAAGGTACCTAAGCGTCTGGAGAGTCTCTCAACGACCATCTTCC
AATCTCTCTTCCCCCCGATCAACCCTCAAGCCACTCCCCTCTCCTCCATT
CGCCGTGTAATGCTCTTGAACCGTGAACTCGCCCCCGAGGGTGAGGAAGA
AGAACACTATGTGTTGAACCTCCGTCATTACGCCATTACTACGAAGAAGA
CCGGTGTTTCGAAACGCATTCGCCGTCTTGATCCCAAGGAAATCCGGAAC
AGGGAGAAGAAGGGAGCTGCTGTGCCCAACCTGGGTAAGCTGGAGGATGC
GGCGGATTATCTGCTGGATCCGTCGGCTGCTGGGTATACCTCGGCCAGTG
AAACGGAAATGGACACGGATGCTGAAGTTGAGGTGGCGGAGAGCACCACG
AAGAAGGTTCTCTCGAAGCGTGAACTGCAGCGCATGAAGGCTGGAGAGAA
GGAGAAGGCACAGAAGAAGCTGAGCAATGCTCCAGGAGTCGAGAAGCGGG
CGGTCAAGTTGGTTGAGCTGGGCCCTCGTATGAAGCTTCGCTTGCTTAAG
GTTGAAGAAGGCCTCTGCGAAGGTCGCGTGATGTGGCACGATTTCATCAA
GAAGTCTGAGGATGAAGTCACCAAATTGGACAAGAACTGGGACCAGAAGA
AGAAGGAGAAGGAGCAAAGAAAGAAGGAACAAAAGGCAAACATTGAGAAG
AAGAAGCAAGCCAAGGCTCAAGCTAAAGCCGAAGGCAAGGAGGTTAAAGA
CGACGATGAAGACGATGTTGATATGGATGACGAGGACGAATGGCTCAGTG
ATGACTTCGAAGATGACAATGCGGAGGAGCAGGAGAACGATGATGAGGAT
GAGGATGAGGTTGAGGACGAGGACGAATCGATGGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003762ATCC10864_003762Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003762-T1.exon1ATCC10864_003762-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003762-T1.exon2ATCC10864_003762-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003762-T1.cdsATCC10864_003762-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003762-T1ATCC10864_003762-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007109
PFAMPF04427
Properties
Property NameValue
NoteBUSCO:EOG09263NE7
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:544023..545453 +
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