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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000068:554979..556504- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003768-T1 ID=ATCC10864_003768-T1|Name=ATCC10864_003768-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1526bp|location=Sequence derived from alignment at MCQH01000068:554979..556504- (Aspergillus niger ATCC 10864)
ATGTCCGATATAGTTTTAGTTTTCTTTCCTCCAGCTTCCTTTGCAGAGAA
AACCACCGGACGCCATGGTAAGTAAATCCAAAATGTTTCATCGTCTTCCA
AATAGATGCTAATATACCTATCAGAAAATCAAAGCTCTTTCTCGTCCTAC
TTCCTCGCAACAGGCTCCGGGAACCGCTGTCGTTCGACAGCCCCGAAACC
TCGACCCGGCGCAGCATCCATTCGAACGGGCTCGTGAGTATACCCGTGCT
CTCAATGCTACCAAGCTAGAGCGCCTGTTTGCTGCGCCCTTCCTGGGCCA
GATGGGCGATGGCCACGTGGACGGTGTGTATACCATGGCCAAGGACCCAG
GCTCTTTGGAACGGTTCGCCAGTGGTAGTGGTGATGGTGTGGTCAAGGTG
TGGGATTTGACCACTCAGGGAGAGGTGTGGAACACCCAGGCACACGACAA
TATCGTCAAGGGTGTCTGCTGGACCCCCGATCGGAAGTTGCTCTCTTGCG
CGAGCGACAAGACCATCAAGCTTTTCGACCCGTACAACTCGGCACCCGAA
GCACCACCGCTAGCAACCTACCTGGGCCAGGGCGCTTTCACCTGCCTCAC
GCACCATCGGGACCTGCCATACTTCGCCGCCTCTTCTTCTCAGATCTCTA
TCTACGATCTCTCCCGTCCTTCCTCCACTCCGTCCCAGACCCTCCACTGG
CCCACCAACGTCGATACCATCACCTCCATCGCTTTCAACCAGACTGAGAC
GTCCATCCTTGGTTCGACCGGTATTGATCGCTCGATTATCATGTACGACC
TTCGGACATCGTCCCCTCTACATAAAATGGTTCTGCGCCTGGCGTCGAAC
GCGATCTCGTGGAATCCGATGGAAGCATTCAACTTTGCCGTTGCCAACGA
AGATCACAACGTCTACCTGTTCGATATGCGCAAGATGGATCGCGCATTGA
ACGTGCTCAAGGATCACGTCGCCGCTGTGATGGACGTGGATTTCAGTCCC
ACTGGTCAGGAATTGGTCACTGCCTCTTACGATCGAACGATCCGCTTGTG
GAACAGATCCACGGGCCACTCTCGCGACATCTACCACACCAAGCGTATGC
AACGGTATGTATTTCACTTTCGCTCTCCTTCTCCAAGCAACTATAGTGCT
GACTTCGTTCTACAGTGTCTTCTCCGCCAAGTTTACCCCCGATAACAAGT
ACGTCTTGTCCGGCTCCGACGATGGCAACATCCGACTTTGGCGCGCAAAC
GCATCCGACCGCAGCGGTGTAAAGAGCGCTCGTCAACGGGCCAAGCTCGA
GTACGACCAGGCCTTGATCCAGAGATACTCGCACATGCCGGAAATCCGCC
GAATCCGACGCCAGCGTCACGTGCCAAAGCCGATCAAGAAGGCGCGCGAG
ATCAAGCGGGAGGAGCTGATGGCGATCAAGAGACGCGAGGAGAACGTGCG
CAAGCACACCAAGAAGGAGAACCTGCCCAAGAGACAGAGCGAGCGCGAGA
AGATGATCCTGGCCAAGGAGCAATAG back to topCoding sequence (CDS) from alignment at MCQH01000068:554979..556504- >ATCC10864_003768-T1 ID=ATCC10864_003768-T1|Name=ATCC10864_003768-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4194bp|location=Sequence derived from alignment at MCQH01000068:554979..556504- (Aspergillus niger ATCC 10864)
TGTCTTCTCCGCCAAGTTTACCCCCGATAACAAGTACGTCTTGTCCGGCT
CCGACGATGGCAACATCCGACTTTGGCGCGCAAACGCATCCGACCGCAGC
GGTGTAAAGAGCGCTCGTCAACGGGCCAAGCTCGAGTACGACCAGGCCTT
GATCCAGAGATACTCGCACATGCCGGAAATCCGCCGAATCCGACGCCAGC
GTCACGTGCCAAAGCCGATCAAGAAGGCGCGCGAGATCAAGCGGGAGGAG
CTGATGGCGATCAAGAGACGCGAGGAGAACGTGCGCAAGCACACCAAGAA
GGAGAACCTGCCCAAGAGACAGAGCGAGCGCGAGAAGATGATCCTGGCCA
AGGAGCAATAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAA
CCGCTGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTC
GAACGGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCG
CCTGTTTGCTGCGCCCTTCCTGGGCCAGATGGGCGATGGCCACGTGGACG
GTGTGTATACCATGGCCAAGGACCCAGGCTCTTTGGAACGGTTCGCCAGT
GGTAGTGGTGATGGTGTGGTCAAGGTGTGGGATTTGACCACTCAGGGAGA
GGTGTGGAACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGA
CCCCCGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTT
TTCGACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCT
GGGCCAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATACT
TCGCCGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCC
TCCACTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCATCAC
CTCCATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTA
TTGATCGCTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTACAT
AAAATGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGA
AGCATTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCG
ATATGCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCC
GCTGTGATGGACGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGC
CTCTTACGATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTC
GCGACATCTACCACACCAAGCGTATGCAACGATGTCCGATATAGTTTTAG
TTTTCTTTCCTCCAGCTTCCTTTGCAGAGAAAACCACCGGACGCCATGTG
TCTTCTCCGCCAAGTTTACCCCCGATAACAAGTACGTCTTGTCCGGCTCC
GACGATGGCAACATCCGACTTTGGCGCGCAAACGCATCCGACCGCAGCGG
TGTAAAGAGCGCTCGTCAACGGGCCAAGCTCGAGTACGACCAGGCCTTGA
TCCAGAGATACTCGCACATGCCGGAAATCCGCCGAATCCGACGCCAGCGT
CACGTGCCAAAGCCGATCAAGAAGGCGCGCGAGATCAAGCGGGAGGAGCT
GATGGCGATCAAGAGACGCGAGGAGAACGTGCGCAAGCACACCAAGAAGG
AGAACCTGCCCAAGAGACAGAGCGAGCGCGAGAAGATGATCCTGGCCAAG
GAGCAATAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAACC
GCTGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTCGA
ACGGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCGCC
TGTTTGCTGCGCCCTTCCTGGGCCAGATGGGCGATGGCCACGTGGACGGT
GTGTATACCATGGCCAAGGACCCAGGCTCTTTGGAACGGTTCGCCAGTGG
TAGTGGTGATGGTGTGGTCAAGGTGTGGGATTTGACCACTCAGGGAGAGG
TGTGGAACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGACC
CCCGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTTTT
CGACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCTGG
GCCAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATACTTC
GCCGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCCTC
CACTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCATCACCT
CCATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTATT
GATCGCTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTACATAA
AATGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGAAG
CATTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCGAT
ATGCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCCGC
TGTGATGGACGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGCCT
CTTACGATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTCGC
GACATCTACCACACCAAGCGTATGCAACGATGTCCGATATAGTTTTAGTT
TTCTTTCCTCCAGCTTCCTTTGCAGAGAAAACCACCGGACGCCATGTGTC
TTCTCCGCCAAGTTTACCCCCGATAACAAGTACGTCTTGTCCGGCTCCGA
CGATGGCAACATCCGACTTTGGCGCGCAAACGCATCCGACCGCAGCGGTG
TAAAGAGCGCTCGTCAACGGGCCAAGCTCGAGTACGACCAGGCCTTGATC
CAGAGATACTCGCACATGCCGGAAATCCGCCGAATCCGACGCCAGCGTCA
CGTGCCAAAGCCGATCAAGAAGGCGCGCGAGATCAAGCGGGAGGAGCTGA
TGGCGATCAAGAGACGCGAGGAGAACGTGCGCAAGCACACCAAGAAGGAG
AACCTGCCCAAGAGACAGAGCGAGCGCGAGAAGATGATCCTGGCCAAGGA
GCAATAGCTCTTTCTCGTCCTACTTCCTCGCAACAGGCTCCGGGAACCGC
TGTCGTTCGACAGCCCCGAAACCTCGACCCGGCGCAGCATCCATTCGAAC
GGGCTCGTGAGTATACCCGTGCTCTCAATGCTACCAAGCTAGAGCGCCTG
TTTGCTGCGCCCTTCCTGGGCCAGATGGGCGATGGCCACGTGGACGGTGT
GTATACCATGGCCAAGGACCCAGGCTCTTTGGAACGGTTCGCCAGTGGTA
GTGGTGATGGTGTGGTCAAGGTGTGGGATTTGACCACTCAGGGAGAGGTG
TGGAACACCCAGGCACACGACAATATCGTCAAGGGTGTCTGCTGGACCCC
CGATCGGAAGTTGCTCTCTTGCGCGAGCGACAAGACCATCAAGCTTTTCG
ACCCGTACAACTCGGCACCCGAAGCACCACCGCTAGCAACCTACCTGGGC
CAGGGCGCTTTCACCTGCCTCACGCACCATCGGGACCTGCCATACTTCGC
CGCCTCTTCTTCTCAGATCTCTATCTACGATCTCTCCCGTCCTTCCTCCA
CTCCGTCCCAGACCCTCCACTGGCCCACCAACGTCGATACCATCACCTCC
ATCGCTTTCAACCAGACTGAGACGTCCATCCTTGGTTCGACCGGTATTGA
TCGCTCGATTATCATGTACGACCTTCGGACATCGTCCCCTCTACATAAAA
TGGTTCTGCGCCTGGCGTCGAACGCGATCTCGTGGAATCCGATGGAAGCA
TTCAACTTTGCCGTTGCCAACGAAGATCACAACGTCTACCTGTTCGATAT
GCGCAAGATGGATCGCGCATTGAACGTGCTCAAGGATCACGTCGCCGCTG
TGATGGACGTGGATTTCAGTCCCACTGGTCAGGAATTGGTCACTGCCTCT
TACGATCGAACGATCCGCTTGTGGAACAGATCCACGGGCCACTCTCGCGA
CATCTACCACACCAAGCGTATGCAACGATGTCCGATATAGTTTTAGTTTT
CTTTCCTCCAGCTTCCTTTGCAGAGAAAACCACCGGACGCCATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR015943 |
| InterPro | IPR007287 |
| InterPro | IPR017986 |
| InterPro | IPR001680 |
| PFAM | PF04158 |
| InterPro | IPR036322 |
| InterPro | IPR020472 |
| PFAM | PF00400 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000068 | supercontig | MCQH01000068:554979..556504 - |
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