|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000068:558497..560167+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003770-T1 ID=ATCC10864_003770-T1|Name=ATCC10864_003770-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1671bp|location=Sequence derived from alignment at MCQH01000068:558497..560167+ (Aspergillus niger ATCC 10864)
ATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTCCCCCCACAAGC
CGCCCAACGCTCCCCTGCCACGCCTCGTCGCGGTCCTCCAGGTCCTGGTG
AGCCTCCACCCTTTAACCCAATCAAACCCCGACGGAACTTTTTCCTCTAA
CTCCTTCTCCCTCGTATAGCTGCTGCGATGCCTGTCCCCATGCCTCAGCA
CGCCGTTCCACCTCAATACATCCCTCCCCAGCGCAACATGCAGCCTCCCA
ATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATCCCC
GACGGCATTGAGGAAGTAATCATCGGCGAAGGTGTGCAGCAGTACAAGAG
CCTCCGCGACCTGGAGAAACGCCTCGATGCAGCCATTGTCCGTAAGCGCC
TGGACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACGATG
CGCATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAA
CGGTGCCGCCCCCGGAAGCAATCCCGGCTCCGGACGGTACAAGGTGCGCA
TCGAGGGACGTCTCCTGGACGACGACACCGACCCGACCGCCCCGGAGGAC
AGTGACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCA
AGATGGACCTAACGCCAATGCCACTACCAAAAAGTCGTCCAACAAGCGCT
CCAAGCAGCGTTTCTCGCACTTCTTCAAATCCATCACCGTCGACTTCGAT
AAGTCCTCCACCGCCAGCCCGGAGGAAGTCAAGCCAATCACCTGGACCAA
GCCGCAATTACCCCCTAACACTGTCACTCTGCCGCCCACAGCAGACTTCG
ACTCGATGCAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTGACATTC
AGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCT
AGCAGAAGTACTAGACGTAGAGGAAGAAACACGAAGCGGCATTGTTCTCG
GCATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAGAAG
CGACTCGTCCGCTGTGACCATCGTCTACGATCGGTACCGCCCCTCCCCAT
CCCCATCCCCATATAAATCCAAGACTAATCCAACCCAACCGCGCAGATCT
TCGGCCGCGACCAAATGTTCTTCCCTCAGATCCCCGAAAGCATCGGCCCT
CACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCGTCGA
CGAAGACTACCACAAGGATCCGACCCCTACCGTCTACGACATCCAAGTCG
CCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAACCCG
CAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTCGC
CCTCATCGTGCAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTACA
CGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAATTCC
CAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTGG
CGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGTTT
GGGATACTACTGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAAGCCG
GAGGCGGCGATGGGGAGGTGA back to topCoding sequence (CDS) from alignment at MCQH01000068:558497..560167+ >ATCC10864_003770-T1 ID=ATCC10864_003770-T1|Name=ATCC10864_003770-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4608bp|location=Sequence derived from alignment at MCQH01000068:558497..560167+ (Aspergillus niger ATCC 10864)
ATGAATGCCCAGATCCCACCCAACTACGGCCGTGGGTTCCCCCCACAAGC
CGCCCAACGCTCCCCTGCCACGCCTCGTCGCGGTCCTCCAGGTCCTGCTG
CTGCGATGCCTGTCCCCATGCCTCAGCACGCCGTTCCACCTCAATACATC
CCTCCCCAGCGCAACATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAG
CCGCAAACCCACCGACAAGAACATCCCCGACGGCATTGAGGAAGTAATCA
TCGGCGAAGGTGTGCAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGC
CTCGATGCAGCCATTGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAG
CAAGACTGTCAAGAAGTACCGCACGATGCGCATTTGGATCTCGAACACTG
TCGAAAACCAACCCTGGCAGACTGCCAACGGTGCCGCCCCCGGAAGCAAT
CCCGGCTCCGGACGGTACAAGGTGCGCATCGAGGGACGTCTCCTGGACGA
CGACACCGACCCGACCGCCCCGGAGGACAGTGACGACGAAGCTACCGAGC
AGACGGACAACGGCGACGCGATGGAGCAAGATGGACCTAACGCCAATGCC
ACTACCAAAAAGTCGTCCAACAAGCGCTCCAAGCAGCGTTTCTCGCACTT
CTTCAAATCCATCACCGTCGACTTCGATAAGTCCTCCACCGCCAGCCCGG
AGGAAGTCAAGCCAATCACCTGGACCAAGCCGCAATTACCCCCTAACACT
GTCACTCTGCCGCCCACAGCAGACTTCGACTCGATGCAGTTCACCCGCGC
GTCACAGGAGAACCTGAACGTGACATTCAGTCTCGTGCGCGACGAGACAC
CAGAACGGTTCAAGCTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAG
GAAGAAACACGAAGCGGCATTGTTCTCGGCATCTGGGACTACATCCGTGC
CATGGGCCTTCAAGAAGATGAAGAGAAGCGACTCGTCCGCTGTGACCATC
GTCTACGATCGATCTTCGGCCGCGACCAAATGTTCTTCCCTCAGATCCCC
GAAAGCATCGGCCCTCACACCAGCCCCATTGACCCCATCCACCTCCCCTA
CACCATCCGCGTCGACGAAGACTACCACAAGGATCCGACCCCTACCGTCT
ACGACATCCAAGTCGCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCC
CTCACCCAGAACCCGCAATACACGGCCTCCATGCGCCAGATCGCCACGCT
AGACGACCAGGTCGCCCTCATCGTGCAAGCCCTGACGCACTCCCGCGCCC
GTCACTCCTTCTACACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGC
CGCTGGATCAATTCCCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGC
GACGCGTGGTGGTGGCGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGTG
GTACGGATGGCGTTTGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTAT
ATGCTTGCTAAGCCGGAGGCGGCGATGGGGAGGTGAATGAATGCCCAGAT
CCCACCCAACTACGGCCGTGGGTTCCCCCCACAAGCCGCCCAACGCTCCC
CTGCCACGCCTCGTCGCGGTCCTCCAGGTCCTGCTGCTGCGATGCCTGTC
CCCATGCCTCAGCACGCCGTTCCACCTCAATACATCCCTCCCCAGCGCAA
CATGCAGCCTCCCAATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCG
ACAAGAACATCCCCGACGGCATTGAGGAAGTAATCATCGGCGAAGGTGTG
CAGCAGTACAAGAGCCTCCGCGACCTGGAGAAACGCCTCGATGCAGCCAT
TGTCCGTAAGCGCCTGGACATCCAAGACTCCATCAGCAAGACTGTCAAGA
AGTACCGCACGATGCGCATTTGGATCTCGAACACTGTCGAAAACCAACCC
TGGCAGACTGCCAACGGTGCCGCCCCCGGAAGCAATCCCGGCTCCGGACG
GTACAAGGTGCGCATCGAGGGACGTCTCCTGGACGACGACACCGACCCGA
CCGCCCCGGAGGACAGTGACGACGAAGCTACCGAGCAGACGGACAACGGC
GACGCGATGGAGCAAGATGGACCTAACGCCAATGCCACTACCAAAAAGTC
GTCCAACAAGCGCTCCAAGCAGCGTTTCTCGCACTTCTTCAAATCCATCA
CCGTCGACTTCGATAAGTCCTCCACCGCCAGCCCGGAGGAAGTCAAGCCA
ATCACCTGGACCAAGCCGCAATTACCCCCTAACACTGTCACTCTGCCGCC
CACAGCAGACTTCGACTCGATGCAGTTCACCCGCGCGTCACAGGAGAACC
TGAACGTGACATTCAGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAG
CTAAGCAAAGAGCTAGCAGAAGTACTAGACGTAGAGGAAGAAACACGAAG
CGGCATTGTTCTCGGCATCTGGGACTACATCCGTGCCATGGGCCTTCAAG
AAGATGAAGAGAAGCGACTCGTCCGCTGTGACCATCGTCTACGATCGATC
TTCGGCCGCGACCAAATGTTCTTCCCTCAGATCCCCGAAAGCATCGGCCC
TCACACCAGCCCCATTGACCCCATCCACCTCCCCTACACCATCCGCGTCG
ACGAAGACTACCACAAGGATCCGACCCCTACCGTCTACGACATCCAAGTC
GCCCTGGAAGACCCTCTCCGCTCCAAGATGCTCGCCCTCACCCAGAACCC
GCAATACACGGCCTCCATGCGCCAGATCGCCACGCTAGACGACCAGGTCG
CCCTCATCGTGCAAGCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTAC
ACGGCTCTCAGCAAGGATCCCGCTACGTTCGTCCGCCGCTGGATCAATTC
CCAGCGCAGAGACTTGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTG
GCGAAGATGCTAGTGGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGTT
TGGGATACTACTGTGGCGAGGGAAGCGGTGCGGTATATGCTTGCTAAGCC
GGAGGCGGCGATGGGGAGGTGAATGAATGCCCAGATCCCACCCAACTACG
GCCGTGGGTTCCCCCCACAAGCCGCCCAACGCTCCCCTGCCACGCCTCGT
CGCGGTCCTCCAGGTCCTGCTGCTGCGATGCCTGTCCCCATGCCTCAGCA
CGCCGTTCCACCTCAATACATCCCTCCCCAGCGCAACATGCAGCCTCCCA
ATGACGCCGCCCTGCGTCGCAGCCGCAAACCCACCGACAAGAACATCCCC
GACGGCATTGAGGAAGTAATCATCGGCGAAGGTGTGCAGCAGTACAAGAG
CCTCCGCGACCTGGAGAAACGCCTCGATGCAGCCATTGTCCGTAAGCGCC
TGGACATCCAAGACTCCATCAGCAAGACTGTCAAGAAGTACCGCACGATG
CGCATTTGGATCTCGAACACTGTCGAAAACCAACCCTGGCAGACTGCCAA
CGGTGCCGCCCCCGGAAGCAATCCCGGCTCCGGACGGTACAAGGTGCGCA
TCGAGGGACGTCTCCTGGACGACGACACCGACCCGACCGCCCCGGAGGAC
AGTGACGACGAAGCTACCGAGCAGACGGACAACGGCGACGCGATGGAGCA
AGATGGACCTAACGCCAATGCCACTACCAAAAAGTCGTCCAACAAGCGCT
CCAAGCAGCGTTTCTCGCACTTCTTCAAATCCATCACCGTCGACTTCGAT
AAGTCCTCCACCGCCAGCCCGGAGGAAGTCAAGCCAATCACCTGGACCAA
GCCGCAATTACCCCCTAACACTGTCACTCTGCCGCCCACAGCAGACTTCG
ACTCGATGCAGTTCACCCGCGCGTCACAGGAGAACCTGAACGTGACATTC
AGTCTCGTGCGCGACGAGACACCAGAACGGTTCAAGCTAAGCAAAGAGCT
AGCAGAAGTACTAGACGTAGAGGAAGAAACACGAAGCGGCATTGTTCTCG
GCATCTGGGACTACATCCGTGCCATGGGCCTTCAAGAAGATGAAGAGAAG
CGACTCGTCCGCTGTGACCATCGTCTACGATCGATCTTCGGCCGCGACCA
AATGTTCTTCCCTCAGATCCCCGAAAGCATCGGCCCTCACACCAGCCCCA
TTGACCCCATCCACCTCCCCTACACCATCCGCGTCGACGAAGACTACCAC
AAGGATCCGACCCCTACCGTCTACGACATCCAAGTCGCCCTGGAAGACCC
TCTCCGCTCCAAGATGCTCGCCCTCACCCAGAACCCGCAATACACGGCCT
CCATGCGCCAGATCGCCACGCTAGACGACCAGGTCGCCCTCATCGTGCAA
GCCCTGACGCACTCCCGCGCCCGTCACTCCTTCTACACGGCTCTCAGCAA
GGATCCCGCTACGTTCGTCCGCCGCTGGATCAATTCCCAGCGCAGAGACT
TGGAGACTATTCTTGGAGAGGCGACGCGTGGTGGTGGCGAAGATGCTAGT
GGGCCTGAGTTCCGTCGTGGTGGTACGGATGGCGTTTGGGATACTACTGT
GGCGAGGGAAGCGGTGCGGTATATGCTTGCTAAGCCGGAGGCGGCGATGG
GGAGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF02201 |
| InterPro | IPR003121 |
| InterPro | IPR036885 |
| InterPro | IPR019835 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262IY3 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000068 | supercontig | MCQH01000068:558497..560167 + |
|
