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ATCC10864_003773-T1, ATCC10864_003773-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003773-T1
Unique NameATCC10864_003773-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:570763..571555+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003773-T1 ID=ATCC10864_003773-T1|Name=ATCC10864_003773-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=793bp|location=Sequence derived from alignment at MCQH01000068:570763..571555+ (Aspergillus niger ATCC 10864)
ATGAAGTGTTAGTGAAATGCTGCATCACCTCGACTCTTGATTTTTCTCGT
CTTCGAATCCAAACTGACAGGATGTTACGATAGTCATGAAAGTGGGCCGT
GTGGCCATCATCACCCGTGGCCGTTACGCCGGTAAGAAGGTACGACAACC
GATTTCTTCATTTTCTGGCGAGGAGATACATATATATATACCCCGAGGTG
GAATGGATTGGAAGGAATGATTTTTTGCCGACTCGAAGGAAATGAATTTT
CGATTTGCATGGGAATAAAACAATCGAGCGGAAACGCGAATGATGGGCGA
ACTACCATGGGGGCAAAAGCGAACGGAATGTGCAAGGATATATGTGCTGA
CGAGGGTTTCATTTCGCGAATGACAGGTCGTCATTGTCCAGCCTAACGAC
ACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCATCGTCGCCGGTATCGA
GCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAAGACCGTCGAGA
AGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTCAACTACAACCACTTG
ATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTC
CACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGAACG
TCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGCAAGAACCGTTGGTTC
TTCACTCCTCTGCGTACGTTTTGCCATCCATTGCTTTTTGCCTACGTTGG
CTGGATTAAGGTTCGCAATGCTGACGGTTCTACAGGTTTCTAA
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Coding sequence (CDS) from alignment at MCQH01000068:570763..571555+

>ATCC10864_003773-T1 ID=ATCC10864_003773-T1|Name=ATCC10864_003773-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1632bp|location=Sequence derived from alignment at MCQH01000068:570763..571555+ (Aspergillus niger ATCC 10864)
ATGAAGTTCATGAAAGTGGGCCGTGTGGCCATCATCACCCGTGGCCGTTA
CGCCGGTAAGAAGGTCGTCATTGTCCAGCCTAACGACACTGGCTCCAAGG
CGCACCCCTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCTACCCCCTC
AAGGTCACCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGCAGCCGCAT
CAAGCCCTTCATCAAGGTCGTCAACTACAACCACTTGATGCCCACTCGCT
ACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCGAGACCTTC
AAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAGAAGGCCCT
TGAGGACCGCTACACCAGCGGCAAGAACCGTTGGTTCTTCACTCCTCTGC
GTTTCTAAATGAAGTTCATGAAAGTGGGCCGTGTGGCCATCATCACCCGT
GGCCGTTACGCCGGTAAGAAGGTCGTCATTGTCCAGCCTAACGACACTGG
CTCCAAGGCGCACCCCTTCCCTTACGCCATCGTCGCCGGTATCGAGCGCT
ACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAAGACCGTCGAGAAGCGC
AGCCGCATCAAGCCCTTCATCAAGGTCGTCAACTACAACCACTTGATGCC
CACTCGCTACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGTCTCCACCG
AGACCTTCAAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGAACGTCAAG
AAGGCCCTTGAGGACCGCTACACCAGCGGCAAGAACCGTTGGTTCTTCAC
TCCTCTGCGTTTCTAAATGAAGTTCATGAAAGTGGGCCGTGTGGCCATCA
TCACCCGTGGCCGTTACGCCGGTAAGAAGGTCGTCATTGTCCAGCCTAAC
GACACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCATCGTCGCCGGTAT
CGAGCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAAGACCGTCG
AGAAGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTCAACTACAACCAC
TTGATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCTTAAGGGTGCCGT
CTCCACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGGACGCCAAGAAGA
ACGTCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGCAAGAACCGTTGG
TTCTTCACTCCTCTGCGTTTCTAAATGAAGTTCATGAAAGTGGGCCGTGT
GGCCATCATCACCCGTGGCCGTTACGCCGGTAAGAAGGTCGTCATTGTCC
AGCCTAACGACACTGGCTCCAAGGCGCACCCCTTCCCTTACGCCATCGTC
GCCGGTATCGAGCGCTACCCCCTCAAGGTCACCCGCCGCATGGGTAAGAA
GACCGTCGAGAAGCGCAGCCGCATCAAGCCCTTCATCAAGGTCGTCAACT
ACAACCACTTGATGCCCACTCGCTACACCCTTGAGCTCGAGGGTCTTAAG
GGTGCCGTCTCCACCGAGACCTTCAAGGAGGTTTCCACCCGCGAGGACGC
CAAGAAGAACGTCAAGAAGGCCCTTGAGGACCGCTACACCAGCGGCAAGA
ACCGTTGGTTCTTCACTCCTCTGCGTTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL27AATCC10864_003773Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003773-T1.exon1ATCC10864_003773-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003773-T1.exon2ATCC10864_003773-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003773-T1.exon3ATCC10864_003773-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003773-T1.exon4ATCC10864_003773-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003773-T1.cdsATCC10864_003773-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003773-T1ATCC10864_003773-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR018262
InterProIPR038655
InterProIPR008991
InterProIPR041991
InterProIPR001141
PFAMPF01777
Properties
Property NameValue
Product60S ribosomal protein L27A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:570763..571555 +
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