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ATCC10864_003786-T1, ATCC10864_003786-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003786-T1
Unique NameATCC10864_003786-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:600153..601594-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003786-T1 ID=ATCC10864_003786-T1|Name=ATCC10864_003786-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1442bp|location=Sequence derived from alignment at MCQH01000068:600153..601594- (Aspergillus niger ATCC 10864)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACAGTAAGACTCCCTCACTATCCATCTCGTGACTTGTGA
AACGCTGATTCGGTCCAGTTTTCCGACAACCTCACCTACTGGCGTAACAA
CTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCG
GCGACAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAAT
GGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCC
GATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCT
ACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAAC
ATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTG
GGGCGATAACTGGGTGCAGAATACGGATGGTTTCGGTATGATTCTTTTTG
TCCGCGCTCTAGTGGAATGGGTTAGGTTCTGACTAGCACTCGTATCCAGA
TACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCG
GAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAG
AATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCA
ATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATG
TACGTGATTGTTTCCCGGCCACCATCGCCATTAGTATTAACCGTAATCCA
GATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCT
GGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCT
CGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAA
TGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACA
ACGGTTCCTATGCGGGTACAAGCAAGATGTCTCTTTCAAATGTTGCGTTT
GTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGT
CTCGTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGG
TGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAA
TATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGA
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Coding sequence (CDS) from alignment at MCQH01000068:600153..601594-

>ATCC10864_003786-T1 ID=ATCC10864_003786-T1|Name=ATCC10864_003786-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5088bp|location=Sequence derived from alignment at MCQH01000068:600153..601594- (Aspergillus niger ATCC 10864)
ATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCTG
GGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCTC
GTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAAT
GTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACAA
CGGTTCCTATGCGGGTACAAGCAAGATGTCTCTTTCAAATGTTGCGTTTG
TCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGTC
TCGTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGGT
GTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAAT
ATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGAATACCATGG
ACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCGGAGATGAC
TGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAGAATGTTAC
CTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCAATATTTGG
AAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATTTTTCCGAC
AACCTCACCTACTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCA
TCATGCCGGCTTCATTATTAGCGGCGACAACATCACCATCAATGGCTATG
GCACCGGCGGCATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAG
GGCGACACGCAGCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTC
TGAGGTTATTGTTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTG
TCAACATCATGAACGGGACTAACATGCGTTTCAACAATATCTACTGCAAC
GCCACGGCTGTAGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGA
TGGTTTCGATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTG
GCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCAC
CGTCCGAGCAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGG
CGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAA
TCGTACTGGATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAAT
CGAATGGCGGGGGAAGTGGACAATCATCCGCTACAACGAAGACATGCACA
ACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCCCAAAGTTCC
TACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAGCATCCGTAA
CGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTGGCCCTTCCA
TCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACAAGCAAGATG
TCTCTTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGTGGATACTGA
GAAGTCTGTGGTCTCGACGGTCTCGTGCTCAGAGGTACATCCGTGCTACA
ATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAATGCCACAACA
GCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGTGCATGGGTT
GAGTGGGTGTTGAATACCATGGACGCTACCAACATCCAGCTCACCAACTT
CGTCTACCAAGGCGGAGATGACTGCATCGCTATCAAGCCCCGCTCCTACA
ACATCGACATCCAGAATGTTACCTGCCGTGGAGGCAACGGCATTGCCATT
GGCAGCTTGGGTCAATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGT
GGACAAGGTCAATTTTTCCGACAACCTCACCTACTGGCGTAACAACTCCT
ACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGAC
AACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCAA
TACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATGC
CATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGTC
AAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGCG
TTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGCG
ATAACTGGGTGCAGAATACGGATGGTTTCGATGCAACTAAGAGCTTCGGT
TTTGCTCTCTTTCCTGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGG
AAAACAACCACAATGTCTGCACCGTCCGAGCAAACGGGGGACACCAAGAT
GACGTCCCCAATATTATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTAC
CATTATTTTCCCCGAAGACCAATCGTACTGGATTGCGACGAGACTGCATC
CCACATTGAAGGACGTCGCAATCGAATGGCGGGGGAAGTGGACAATCATC
CGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCTGGGTCGG
AGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTGGCG
ATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAATGTACAA
GGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACAACGGTTC
CTATGCGGGTACAAGCAAGATGTCTCTTTCAAATGTTGCGTTTGTCAATT
TCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGTCTCGTGC
TCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGGTGTTGTA
TCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAATATACAG
CTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGAATACCATGGACGCTA
CCAACATCCAGCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATC
GCTATCAAGCCCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCG
TGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATA
GCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATTTTTCCGACAACCTC
ACCTACTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATGC
CGGCTTCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACCG
GCGGCATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGAC
ACGCAGCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGGT
TATTGTTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAACA
TCATGAACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCACG
GCTGTAGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTTT
CGATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCC
GTTGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCG
AGCAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCA
AAGAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTAC
TGGATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATG
GCGGGGGAAGTGGACAATCATCCGCTACAACGAAGACATGCACAACAGCG
CCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAA
AGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCT
ATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTC
AGGACAGTGGAGACAACGGTTCCTATGCGGGTACAAGCAAGATGTCTCTT
TCAAATGTTGCGTTTGTCAATTTCACGGGATGGGTGGATACTGAGAAGTC
TGTGGTCTCGACGGTCTCGTGCTCAGAGGTACATCCGTGCTACAATATCG
ACTATGACAATGTGGTGTTGTATCCAGGGAAGAATGCCACAACAGCTGGG
ACAGGGTCTTGTAAATATACAGCTGATGGAGGAGTGCATGGGTTGAGTGG
GTGTTGAATACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTA
CCAAGGCGGAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCG
ACATCCAGAATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGC
TTGGGTCAATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAA
GGTCAATTTTTCCGACAACCTCACCTACTGGCGTAACAACTCCTACCCCA
TTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGACAACATC
ACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCAATACTTG
GTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATGCCATTTG
TCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGTCAAGGAT
CCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGCGTTTCAA
CAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGCGATAACT
GGGTGCAGAATACGGATGGTTTCGATGCAACTAAGAGCTTCGGTTTTGCT
CTCTTTCCTGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACA
ACCACAATGTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTC
CCCAATATTATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTAT
TTTCCCCGAAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACAT
TGAAGGACGTCGCAATCGAATGGCGGGGGAAGTGGACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003786ATCC10864_003786Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003786-T1ATCC10864_003786-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003786-T1.cdsATCC10864_003786-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003786-T1.exon4ATCC10864_003786-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_003786-T1.exon3ATCC10864_003786-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003786-T1.exon2ATCC10864_003786-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003786-T1.exon1ATCC10864_003786-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteCAZy:GH28
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:600153..601594 -
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