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ATCC10864_003797-T1, ATCC10864_003797-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003797-T1
Unique NameATCC10864_003797-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:633715..635287+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003797-T1 ID=ATCC10864_003797-T1|Name=ATCC10864_003797-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1573bp|location=Sequence derived from alignment at MCQH01000068:633715..635287+ (Aspergillus niger ATCC 10864)
ATGGCGTACGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACA
CCACAATAGAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCC
TGGTTAGTTCGCAGTTGAACAAGGCCTCTTCGCTTACAATATCTAACGCT
GCTATTAGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATC
CCCTTCACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAAT
GGTCTTTGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCG
TCGAGCCAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCC
GACATTGTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTT
ACGGCGGTTGATGATGGAGGTGCGTATAAACCCGCTTCTTATATGAAACA
GATGAGCTCAGTCGGACCTAACACGGCATATGGAAACATAGTGTGGTGTC
AATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGT
TAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAA
CGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGC
ATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGA
AATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTAC
GACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAA
GAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACG
GCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAG
AAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAG
TCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAAT
CGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGT
TTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGAT
ATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAG
GAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGC
AGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATC
GAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCG
CATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTG
AAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAG
AAGAAGGTAAATGTCTCTTGTTTCCTTCGGCTTTGCATGCTTTACTAATT
TCCATCCAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAG
CGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCA
CGGACATGGAGAAATGCCTATAA
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Coding sequence (CDS) from alignment at MCQH01000068:633715..635287+

>ATCC10864_003797-T1 ID=ATCC10864_003797-T1|Name=ATCC10864_003797-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5568bp|location=Sequence derived from alignment at MCQH01000068:633715..635287+ (Aspergillus niger ATCC 10864)
ATGGCGTACGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACA
CCACAATAGAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCC
TGCCGGACAAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCCTTC
ACCGCCGCCGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGTCTT
TGAATGGTTTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCGAGC
CAGCGATGCGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGACATT
GTACCTACCGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACGGCG
GTTGATGATGGAGTGTGGTGTCAATGATTTTATGTTTACCGATCTCACCA
AGCCAACGCATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTT
GTCAGATTCCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAA
GGGCGAGAAGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGG
AGATGGAGCAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAG
GCACAGGTTAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCT
ACTCGAATTGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAG
CCAAGGCGGATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAA
AAGGTCGTTCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTAT
GGAGAGCCCCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATC
TCCTTCGTGAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCT
CTGCAAACATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGC
TTGTGTGCGCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATG
ATGAAGAGTCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGG
AATAATGTCAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCT
GGCACGATGGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAA
AAGCCGAAGTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAA
CAACTCCGGGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAG
AATCCGGATCGAACAAACTGAGAAGAAGATGGCCGATCTCAAGGAGAACA
TTGAGAGCGAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCA
CACATCAAACTCTATATCACGGACATGGAGAAATGCCTATAAATGGCGTA
CGGCAGCCGAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATA
GAGGTCGCAAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGCCGGAC
AAGGAAATCGCAGGATGCATTAATGACATAGGCATCCCCTTCACCGCCGC
CGACTTGATCAAGCCAAACCCGCAACAGATTCAAATGGTCTTTGAATGGT
TTGCCGAGCTCCTTATGAATATGACACGCGAAACCGTCGAGCCAGCGATG
CGAGCGGCGGCGGACGATATCTGTGGCGACTACCCCGACATTGTACCTAC
CGACACGCGCAACCTCATGGGGTTCTTTACCAGCTTACGGCGGTTGATGA
TGGAGTGTGGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACG
CATGATCGACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATT
CCGCGAATCTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGA
AGGTCAAGTCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAG
CAGCGCCTCGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGT
TAAGGAGAAGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAAT
TGCGACGAAACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCG
GATAAGGCAAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGT
TCGTACGCGACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCC
CCATCTCTCTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGT
GAGAAAGCGCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAAC
ATCATCGGACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGC
GCCTTCTCGAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAG
TCAAGGGCCTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGT
CAGGGAAGTGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGAT
GGAATGAGAGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAA
GTAGCGCAGGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCG
GGAGGAGCGAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGA
TCGAACAAACTGAGAAGAAGATGGCCGATCTCAAGGAGAACATTGAGAGC
GAAATCCAAAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAA
ACTCTATATCACGGACATGGAGAAATGCCTATAAATGGCGTACGGCAGCC
GAATGAGCCAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGC
AAGAAGGAGGATGAGAATGATGCTCTTATGCGCCTGCCGGACAAGGAAAT
CGCAGGATGCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGA
TCAAGCCAAACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAG
CTCCTTATGAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGC
GGCGGACGATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGC
GCAACCTCATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGTGT
GGTGTCAATGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCG
ACTCGTTAAGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAAT
CTCAAACGCCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAG
TCGCGCATTGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCT
CGAGGAAATGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGA
AGGTACGACGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGA
AACCAAGAGCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGC
AAGACGGCAAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGC
GACAAGAAGTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCT
CTCCAGTCGTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGC
GCAAATCGACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGG
ACACGTTTACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTC
GAAGATATATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGC
CTCTAGGAATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAG
TGGAGCAGACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAG
AGGATCGAGGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCA
GGCGCGCATGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGC
GAGCTGAAAAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAA
ACTGAGAAGAAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCA
AAGCGCTCACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATA
TCACGGACATGGAGAAATGCCTATAAATGGCGTACGGCAGCCGAATGAGC
CAGCAATTCCATGGCTCCCAGCAACACCACAATAGAGGTCGCAAGAAGGA
GGATGAGAATGATGCTCTTATGCGCCTGCCGGACAAGGAAATCGCAGGAT
GCATTAATGACATAGGCATCCCCTTCACCGCCGCCGACTTGATCAAGCCA
AACCCGCAACAGATTCAAATGGTCTTTGAATGGTTTGCCGAGCTCCTTAT
GAATATGACACGCGAAACCGTCGAGCCAGCGATGCGAGCGGCGGCGGACG
ATATCTGTGGCGACTACCCCGACATTGTACCTACCGACACGCGCAACCTC
ATGGGGTTCTTTACCAGCTTACGGCGGTTGATGATGGAGTGTGGTGTCAA
TGATTTTATGTTTACCGATCTCACCAAGCCAACGCATGATCGACTCGTTA
AGATATTCTCCTACCTCATCAACTTTGTCAGATTCCGCGAATCTCAAACG
CCCGTTATTGATGAGCATTTCAACAAGGGCGAGAAGGTCAAGTCGCGCAT
TGACACCCTGTACACGGAGAACCAGGAGATGGAGCAGCGCCTCGAGGAAA
TGCGCCGGACTCTGAAGGCCAACGAGGCACAGGTTAAGGAGAAGGTACGA
CGGAATGACGAGTTGAAAGCACGGCTACTCGAATTGCGACGAAACCAAGA
GCGAGTGGCCGAGATGCTAGAAAGAGCCAAGGCGGATAAGGCAAGACGGC
AAGCGCAGCTTGAGGAGAAGACGGAAAAGGTCGTTCGTACGCGACAAGAA
GTCGAGAAACTGCGTCCCTATGTTATGGAGAGCCCCATCTCTCTCCAGTC
GTCGCTGAGTGAATTGTCGGAAAATCTCCTTCGTGAGAAAGCGCAAATCG
ACGCGATGGAGAAACGAGCGAGAGCTCTGCAAACATCATCGGACACGTTT
ACGGTCGTTAGTAACGACGTGCAAGCTTGTGTGCGCCTTCTCGAAGATAT
ATCCGTGGAACTGCAAAAGGAAGATGATGAAGAGTCAAGGGCCTCTAGGA
ATAGAGAAGCCATTTCAGAGCGGGGGAATAATGTCAGGGAAGTGGAGCAG
ACCGAGAAGTTGCTGCAGCGGCAGCTGGCACGATGGAATGAGAGGATCGA
GGCTTTACGGAAAAATGCTCAAGAAAAAGCCGAAGTAGCGCAGGCGCGCA
TGGAGGAACTCCGGGAAGTTCAGAAACAACTCCGGGAGGAGCGAGCTGAA
AAGCAACGCGACATGGAGCGGAGGAGAATCCGGATCGAACAAACTGAGAA
GAAGATGGCCGATCTCAAGGAGAACATTGAGAGCGAAATCCAAAGCGCTC
ACGATGAGTACTTGAAGTTGGAGTCACACATCAAACTCTATATCACGGAC
ATGGAGAAATGCCTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031262Ndc80 complex
GO:0000776kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NUF2ATCC10864_003797Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003797-T1.exon1ATCC10864_003797-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003797-T1.exon2ATCC10864_003797-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003797-T1.exon3ATCC10864_003797-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003797-T1.exon4ATCC10864_003797-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003797-T1.cdsATCC10864_003797-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003797-T1ATCC10864_003797-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03800
InterProIPR041112
PFAMPF18595
InterProIPR038275
InterProIPR005549
Properties
Property NameValue
Productkinetochore-associated Ndc80 complex subunit nuf2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:633715..635287 +
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