|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000068:640509..643096+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003800-T1 ID=ATCC10864_003800-T1|Name=ATCC10864_003800-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2588bp|location=Sequence derived from alignment at MCQH01000068:640509..643096+ (Aspergillus niger ATCC 10864)
ATGGAGACCATTTCCAGGATATCCACGATGCTGGAAACAGGTAATGTCAC
CCCGGGCACAGTTGCTCGCCAATTGTCCTCCGCGTCTGGACAAATCGACT
AACTGATCGTGCGAGCAGCTCGTGAGCTCACCCTCGAAGCAGCCCAGTCA
GCAGCCCTGAGTAAGGGGTCTAGCACGGGTTTATCGTCTCGGAATTTGGC
TACTGCTCACATCAAAAAGCTTCTGGATAGTCGAAATGACCGGGAGGTCC
TGGATGGCATGCGCCGGGTGATTACGGTAAGGTCCCAAGATGCCTACATG
CAAGAGTCCATTGTCTGACGCTCTTTTGATTTTGCGCCACATAGTTGATG
TACCGATCCGAACCTTCCCTTCCTTTCTTCTCGGCTGTGGTCAAAAACGT
GGCTAGTGCGAACCTTGAGGTCAAGAAGTTGGTCTACATCTACTTGGTCC
ATCATGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTATCAATGCTATC
CAAAAGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTATGGCGCTTCG
TACAATGTCGGGAATCAGAGTGCCAGTCATCAGTCAGATTGTGTCCCTGG
CAATCAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCGCAAAGCCGCA
GCATTGGCAATCCCAAAGTGCTATCGCCTGGACCCAAGTACCCTCCCTCA
GCTGATTGGATATCTTACTACTTTGCTCGGTGATAGCCAGTACTTCGTCC
TTGGGCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCGGACAGGATCGAC
CTCATCCATAAGCATTACCGAAGCCTCGTCAAAAAGCTCGTCGACATGGA
CGAGTGGAGCCAACTCTCGACATTGCGTCTTCTGACCATTTACGCTAGGA
AGTGCTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCTGAAGGC
TTCTACGAGGACGATAAGACACCGGAGAGCAATGGTGGTGATAACGAGCA
TGAAGTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTACGTACTTGCA
AGCTGTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGGCGTTGTCCGG
TGTTTCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGTTGGTCC
TCTGGTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCATGTTGCGCTAT
ATAACATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTTTACGAGATAC
ACTACGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATATCTGGCGCCT
CAAGCTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGGCTGCACCTGA
AGGGTGTGATTCTCAGCGAGCTGGAACACTTTTCACAGAGCGCAGACCCA
GACCTAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCGCACAGAGTGA
GCCTCGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAATTACGA
GTCTTGACGACAACCTTGTTTCAGAGTCCTTGACCGTCATCAGACACCTC
ATCCAGCAGGACCCACCTGCTCACGAGAAGACGGTGATTCAGCTTGTCAA
GCATTTGGGATTAACGAAGAATCCGGATGCTAGAGCAACCATTGTTTGGC
TGGTCGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCGGCAGAC
ATCCTGCGCATTCTGGTACAAGACTTTGCAAATGAATCCGAGGCCGTTAA
GCAGCAGATCATCCTTCTGGGTGCTAAGGTATATTTGCATCATCTGTTGC
GAAACCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAAAAAATC
GTCAACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAGAATCAGGCGA
CGAGAAACCGCAGAGTGATGAACCTGAAGAGGACAGGATGACGCTGCTCT
GGCGGTACCTTCTTCTGCTTGCTCGATATGATACTTCCTACGATCTTCGC
GACCGAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTTCTTCTACACA
ACTGGCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCACACGCTCCGA
GCCCGTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTCGACCCTCGTG
GTTGGTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAACCTCCC
TGAATGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTCCGGGAGAACG
ATATCAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGCGAGAGG
CTCGACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAACTTCAAGCAG
GCAACGGGATGGTCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGGGGAAGT
CACTCGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAGGAGACA
GAAACAGAGGAAGAGGTGACTGACTCTGAATACGAGGAAGTTACGGACGA
GGAAACGGACGAAGAGGAGGAAACGGATGAAGAATATGAGACGGACGAAG
AAGAGCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGA back to topCoding sequence (CDS) from alignment at MCQH01000068:640509..643096+ >ATCC10864_003800-T1 ID=ATCC10864_003800-T1|Name=ATCC10864_003800-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7326bp|location=Sequence derived from alignment at MCQH01000068:640509..643096+ (Aspergillus niger ATCC 10864)
ATGGAGACCATTTCCAGGATATCCACGATGCTGGAAACAGCTCGTGAGCT
CACCCTCGAAGCAGCCCAGTCAGCAGCCCTGAGTAAGGGGTCTAGCACGG
GTTTATCGTCTCGGAATTTGGCTACTGCTCACATCAAAAAGCTTCTGGAT
AGTCGAAATGACCGGGAGGTCCTGGATGGCATGCGCCGGGTGATTACGTT
GATGTACCGATCCGAACCTTCCCTTCCTTTCTTCTCGGCTGTGGTCAAAA
ACGTGGCTAGTGCGAACCTTGAGGTCAAGAAGTTGGTCTACATCTACTTG
GTCCATCATGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTATCAATGC
TATCCAAAAGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTATGGCGC
TTCGTACAATGTCGGGAATCAGAGTGCCAGTCATCAGTCAGATTGTGTCC
CTGGCAATCAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCGCAAAGC
CGCAGCATTGGCAATCCCAAAGTGCTATCGCCTGGACCCAAGTACCCTCC
CTCAGCTGATTGGATATCTTACTACTTTGCTCGGTGATAGCCAGTACTTC
GTCCTTGGGCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCGGACAGGAT
CGACCTCATCCATAAGCATTACCGAAGCCTCGTCAAAAAGCTCGTCGACA
TGGACGAGTGGAGCCAACTCTCGACATTGCGTCTTCTGACCATTTACGCT
AGGAAGTGCTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCTGA
AGGCTTCTACGAGGACGATAAGACACCGGAGAGCAATGGTGGTGATAACG
AGCATGAAGTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTACGTACT
TGCAAGCTGTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGGCGTTGT
CCGGTGTTTCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGTTG
GTCCTCTGGTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCATGTTGCG
CTATATAACATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTTTACGAG
ATACACTACGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATATCTGGC
GCCTCAAGCTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGGCTGCAC
CTGAAGGGTGTGATTCTCAGCGAGCTGGAACACTTTTCACAGAGCGCAGA
CCCAGACCTAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCGCACAGA
GTGAGCCTCGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAATT
ACGAGTCTTGACGACAACCTTGTTTCAGAGTCCTTGACCGTCATCAGACA
CCTCATCCAGCAGGACCCACCTGCTCACGAGAAGACGGTGATTCAGCTTG
TCAAGCATTTGGGATTAACGAAGAATCCGGATGCTAGAGCAACCATTGTT
TGGCTGGTCGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCGGC
AGACATCCTGCGCATTCTGGTACAAGACTTTGCAAATGAATCCGAGGCCG
TTAAGCAGCAGATCATCCTTCTGGGTGCTAAGGTATATTTGCATCATCTG
TTGCGAAACCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAAAA
AATCGTCAACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAGAATCAG
GCGACGAGAAACCGCAGAGTGATGAACCTGAAGAGGACAGGATGACGCTG
CTCTGGCGGTACCTTCTTCTGCTTGCTCGATATGATACTTCCTACGATCT
TCGCGACCGAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTTCTTCTA
CACAACTGGCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCACACGCT
CCGAGCCCGTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTCGACCCT
CGTGGTTGGTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAACC
TCCCTGAATGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTCCGGGAG
AACGATATCAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGCGA
GAGGCTCGACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAACTTCAA
GCAGGCAACGGGATGGTCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGGGG
AAGTCACTCGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAGGA
GACAGAAACAGAGGAAGAGGTGACTGACTCTGAATACGAGGAAGTTACGG
ACGAGGAAACGGACGAAGAGGAGGAAACGGATGAAGAATATGAGACGGAC
GAAGAAGAGCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGAATGGAGAC
CATTTCCAGGATATCCACGATGCTGGAAACAGCTCGTGAGCTCACCCTCG
AAGCAGCCCAGTCAGCAGCCCTGAGTAAGGGGTCTAGCACGGGTTTATCG
TCTCGGAATTTGGCTACTGCTCACATCAAAAAGCTTCTGGATAGTCGAAA
TGACCGGGAGGTCCTGGATGGCATGCGCCGGGTGATTACGTTGATGTACC
GATCCGAACCTTCCCTTCCTTTCTTCTCGGCTGTGGTCAAAAACGTGGCT
AGTGCGAACCTTGAGGTCAAGAAGTTGGTCTACATCTACTTGGTCCATCA
TGCGGAGGCGGAACCGGACCTTGCGCTCCTATCTATCAATGCTATCCAAA
AGTCCCTTACCGATCAGAACCCCCATTCGCGTGCTATGGCGCTTCGTACA
ATGTCGGGAATCAGAGTGCCAGTCATCAGTCAGATTGTGTCCCTGGCAAT
CAAGAGAGGCTGCGGCGACATGAGCCCACATGTTCGCAAAGCCGCAGCAT
TGGCAATCCCAAAGTGCTATCGCCTGGACCCAAGTACCCTCCCTCAGCTG
ATTGGATATCTTACTACTTTGCTCGGTGATAGCCAGTACTTCGTCCTTGG
GCCTGCTGTCGCCGCTTTCCTGGACGTTTGTCCGGACAGGATCGACCTCA
TCCATAAGCATTACCGAAGCCTCGTCAAAAAGCTCGTCGACATGGACGAG
TGGAGCCAACTCTCGACATTGCGTCTTCTGACCATTTACGCTAGGAAGTG
CTTCCCTCGCAAGGTCCAGAAAGGTAAACAGGCAGTTTCTGAAGGCTTCT
ACGAGGACGATAAGACACCGGAGAGCAATGGTGGTGATAACGAGCATGAA
GTGCTTGTGTTGGATCCTGATCTTGAATTTCTCTTACGTACTTGCAAGCT
GTTGCTGCAAAATCGCAACTCCGCTGTCATTGTTGGCGTTGTCCGGTGTT
TCCTTTACCTCGGCACTCCCGAGTATCTTGAAGCCGCCGTTGGTCCTCTG
GTTGCGCTGGTTCGGAGCCCACAAGATACGCAGCATGTTGCGCTATATAA
CATCGTCGCCGTTGCCCTGAAACACCCTAAGCCGTTTACGAGATACACTA
CGCACTTTTTGGTCCACGCGGTAGATCCGCCTCATATCTGGCGCCTCAAG
CTGGAAGTGCTCACTTTACTCTTTCCCCACTGCGGGCTGCACCTGAAGGG
TGTGATTCTCAGCGAGCTGGAACACTTTTCACAGAGCGCAGACCCAGACC
TAGTGCGAGAAAGCGTGCGTGCTATAGGACGCTGCGCACAGAGTGAGCCT
CGAAGTGCTGATCATTGTCTCCGCGTCCTTCTGAGTCAAATTACGAGTCT
TGACGACAACCTTGTTTCAGAGTCCTTGACCGTCATCAGACACCTCATCC
AGCAGGACCCACCTGCTCACGAGAAGACGGTGATTCAGCTTGTCAAGCAT
TTGGGATTAACGAAGAATCCGGATGCTAGAGCAACCATTGTTTGGCTGGT
CGGAGAATTTGCCGGTGTTGAGCCTGAGAGGAATATCGCGGCAGACATCC
TGCGCATTCTGGTACAAGACTTTGCAAATGAATCCGAGGCCGTTAAGCAG
CAGATCATCCTTCTGGGTGCTAAGGTATATTTGCATCATCTGTTGCGAAA
CCCTCCAAAGGAAGTGCCTCCACCAGAGCCCAAGCCTGAAAAAATCGTCA
ACGAGTGGACGGAGAACGAAGAGGAGCGGAAAGAAGAATCAGGCGACGAG
AAACCGCAGAGTGATGAACCTGAAGAGGACAGGATGACGCTGCTCTGGCG
GTACCTTCTTCTGCTTGCTCGATATGATACTTCCTACGATCTTCGCGACC
GAGCCCGTCTATACAAGGCTTTACTCGCTTCTCCTTCTTCTACACAACTG
GCCAATCTGCTATTACTTGCGCCAAAGCCTGTTCCACACGCTCCGAGCCC
GTCAGAAACACGCAAGGACCTGCTGATAGGCTCCTCGACCCTCGTGGTTG
GTCCCGACGCTGGCATGCTTGGCTTGAAGGGCTATCAAAACCTCCCTGAA
TGGGTTGAGTTCGGACAAGAACCCGACCCTCGCCTCCGGGAGAACGATAT
CAAACCAAGCGTGGTAGAAAAGTCGTCCATGACTGCGGGCGAGAGGCTCG
ACCGAGCCCTTAAGGAGCATGAAAGTACCGCTGCAACTTCAAGCAGGCAA
CGGGATGGTCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGGGGAAGTCACT
CGACCAGTGGCTTGAGGAGCCCGAGACGGAAACTGAGGAGGAGACAGAAA
CAGAGGAAGAGGTGACTGACTCTGAATACGAGGAAGTTACGGACGAGGAA
ACGGACGAAGAGGAGGAAACGGATGAAGAATATGAGACGGACGAAGAAGA
GCAGGGACAGAGTGCAGGACTCTTGAAGCCGTGAATGGAGACCATTTCCA
GGATATCCACGATGCTGGAAACAGCTCGTGAGCTCACCCTCGAAGCAGCC
CAGTCAGCAGCCCTGAGTAAGGGGTCTAGCACGGGTTTATCGTCTCGGAA
TTTGGCTACTGCTCACATCAAAAAGCTTCTGGATAGTCGAAATGACCGGG
AGGTCCTGGATGGCATGCGCCGGGTGATTACGTTGATGTACCGATCCGAA
CCTTCCCTTCCTTTCTTCTCGGCTGTGGTCAAAAACGTGGCTAGTGCGAA
CCTTGAGGTCAAGAAGTTGGTCTACATCTACTTGGTCCATCATGCGGAGG
CGGAACCGGACCTTGCGCTCCTATCTATCAATGCTATCCAAAAGTCCCTT
ACCGATCAGAACCCCCATTCGCGTGCTATGGCGCTTCGTACAATGTCGGG
AATCAGAGTGCCAGTCATCAGTCAGATTGTGTCCCTGGCAATCAAGAGAG
GCTGCGGCGACATGAGCCCACATGTTCGCAAAGCCGCAGCATTGGCAATC
CCAAAGTGCTATCGCCTGGACCCAAGTACCCTCCCTCAGCTGATTGGATA
TCTTACTACTTTGCTCGGTGATAGCCAGTACTTCGTCCTTGGGCCTGCTG
TCGCCGCTTTCCTGGACGTTTGTCCGGACAGGATCGACCTCATCCATAAG
CATTACCGAAGCCTCGTCAAAAAGCTCGTCGACATGGACGAGTGGAGCCA
ACTCTCGACATTGCGTCTTCTGACCATTTACGCTAGGAAGTGCTTCCCTC
GCAAGGTCCAGAAAGGTAAACAGGCAGTTTCTGAAGGCTTCTACGAGGAC
GATAAGACACCGGAGAGCAATGGTGGTGATAACGAGCATGAAGTGCTTGT
GTTGGATCCTGATCTTGAATTTCTCTTACGTACTTGCAAGCTGTTGCTGC
AAAATCGCAACTCCGCTGTCATTGTTGGCGTTGTCCGGTGTTTCCTTTAC
CTCGGCACTCCCGAGTATCTTGAAGCCGCCGTTGGTCCTCTGGTTGCGCT
GGTTCGGAGCCCACAAGATACGCAGCATGTTGCGCTATATAACATCGTCG
CCGTTGCCCTGAAACACCCTAAGCCGTTTACGAGATACACTACGCACTTT
TTGGTCCACGCGGTAGATCCGCCTCATATCTGGCGCCTCAAGCTGGAAGT
GCTCACTTTACTCTTTCCCCACTGCGGGCTGCACCTGAAGGGTGTGATTC
TCAGCGAGCTGGAACACTTTTCACAGAGCGCAGACCCAGACCTAGTGCGA
GAAAGCGTGCGTGCTATAGGACGCTGCGCACAGAGTGAGCCTCGAAGTGC
TGATCATTGTCTCCGCGTCCTTCTGAGTCAAATTACGAGTCTTGACGACA
ACCTTGTTTCAGAGTCCTTGACCGTCATCAGACACCTCATCCAGCAGGAC
CCACCTGCTCACGAGAAGACGGTGATTCAGCTTGTCAAGCATTTGGGATT
AACGAAGAATCCGGATGCTAGAGCAACCATTGTTTGGCTGGTCGGAGAAT
TTGCCGGTGTTGAGCCTGAGAGGAATATCGCGGCAGACATCCTGCGCATT
CTGGTACAAGACTTTGCAAATGAATCCGAGGCCGTTAAGCAGCAGATCAT
CCTTCTGGGTGCTAAGGTATATTTGCATCATCTGTTGCGAAACCCTCCAA
AGGAAGTGCCTCCACCAGAGCCCAAGCCTGAAAAAATCGTCAACGAGTGG
ACGGAGAACGAAGAGGAGCGGAAAGAAGAATCAGGCGACGAGAAACCGCA
GAGTGATGAACCTGAAGAGGACAGGATGACGCTGCTCTGGCGGTACCTTC
TTCTGCTTGCTCGATATGATACTTCCTACGATCTTCGCGACCGAGCCCGT
CTATACAAGGCTTTACTCGCTTCTCCTTCTTCTACACAACTGGCCAATCT
GCTATTACTTGCGCCAAAGCCTGTTCCACACGCTCCGAGCCCGTCAGAAA
CACGCAAGGACCTGCTGATAGGCTCCTCGACCCTCGTGGTTGGTCCCGAC
GCTGGCATGCTTGGCTTGAAGGGCTATCAAAACCTCCCTGAATGGGTTGA
GTTCGGACAAGAACCCGACCCTCGCCTCCGGGAGAACGATATCAAACCAA
GCGTGGTAGAAAAGTCGTCCATGACTGCGGGCGAGAGGCTCGACCGAGCC
CTTAAGGAGCATGAAAGTACCGCTGCAACTTCAAGCAGGCAACGGGATGG
TCGCGGAGTAGCGGTTGCCTCCTCAGCGAAGGGGAAGTCACTCGACCAGT
GGCTTGAGGAGCCCGAGACGGAAACTGAGGAGGAGACAGAAACAGAGGAA
GAGGTGACTGACTCTGAATACGAGGAAGTTACGGACGAGGAAACGGACGA
AGAGGAGGAAACGGATGAAGAATATGAGACGGACGAAGAAGAGCAGGGAC
AGAGTGCAGGACTCTTGAAGCCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
| GO:0016192 | vesicle-mediated transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030123 | AP-3 adaptor complex |
| GO:0030117 | membrane coat |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR016024 |
| InterPro | IPR002553 |
| InterPro | IPR026739 |
| InterPro | IPR011989 |
| PFAM | PF12717 |
| InterPro | IPR026740 |
| PFAM | PF01602 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260VHV |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000068 | supercontig | MCQH01000068:640509..643096 + |
|
