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ATCC10864_003802-T1, ATCC10864_003802-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003802-T1
Unique NameATCC10864_003802-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:645888..646879-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003802-T1 ID=ATCC10864_003802-T1|Name=ATCC10864_003802-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=992bp|location=Sequence derived from alignment at MCQH01000068:645888..646879- (Aspergillus niger ATCC 10864)
ATGCCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAA
GGTCGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGGTATGTGCT
ATCTACGCTGGCCTACCCCCTCCCGGGCAATCCTATACCCCTCCCACTCC
CCGTGGTAGTAGCCTCGTGGCATCCAGCATCGCCGCCGCCTCCCCCCTTG
CTTGCTGCCTAGTCCCGTCAAACGTACAGCGCGAGCATTCCTGATACCCC
ACTGTTGAAATTGAAATTGCGTCTCTCTCTCTCTCTCTCCCGCGCAAACT
TGGCTGTTTCTTGGAATCCTCCACTTGCCTCAAATTTCGTATCTAATTCA
AATCCCCTACAGACAAGAACGACGAGTCTCTCAACCGCTGGAAGGCCTCT
CTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAATGATCCCAGAAA
GTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACGTCCCGATGTTG
TGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCAAGGACAAGCCC
TTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTCGTCTTCCAGGT
GCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGTGGTGAAGCGCA
AGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGGTAAGTACTCTCATC
TCGACAATCGCAGGATGTAAGCCATGTACTCACTCGCTTATAGGGAAGCT
ACGCTCCCAGCACCACCGACAAGCCCGTCTACGAGAAGAAGTGTAAGCCA
CTACCCTACTATATGACACAAATAGAAAGGAAAAAGACATAAAAGTACTA
ACCCGACGCAGTCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTG
GCCACTACAACGCCGTGTCCAAGTTCGTCGACGATGACAACCACACCCAC
CTCCAGTTCGAGTGGTCCTTCGACATCGCCAAGGACTGGTAG
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Coding sequence (CDS) from alignment at MCQH01000068:645888..646879-

>ATCC10864_003802-T1 ID=ATCC10864_003802-T1|Name=ATCC10864_003802-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2376bp|location=Sequence derived from alignment at MCQH01000068:645888..646879- (Aspergillus niger ATCC 10864)
TCAACGCCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAAC
GCCGTGTCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCGA
GTGGTCCTTCGACATCGCCAAGGACTGGTAGGGAAGCTACGCTCCCAGCA
CCACCGACAAGCCCGTCTACGAGAAGAAGTACAAGAACGACGAGTCTCTC
AACCGCTGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGA
CCCCAATGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGC
AGGGACGTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAG
ACCCTCAAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACAT
CAAGGTCGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACC
TGCAGGTGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATG
CTGATGCCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTT
CAAGGTCGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGTCAACG
CCGAGGAAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAACGCCGTG
TCCAAGTTCGTCGACGATGACAACCACACCCACCTCCAGTTCGAGTGGTC
CTTCGACATCGCCAAGGACTGGTAGGGAAGCTACGCTCCCAGCACCACCG
ACAAGCCCGTCTACGAGAAGAAGTACAAGAACGACGAGTCTCTCAACCGC
TGGAAGGCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAA
TGATCCCAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGAC
GTCCCGATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTC
AAGGACAAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGT
CGTCTTCCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGG
TGGTGAAGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGATG
CCTGAGCACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGT
CGGAGAGAAGAAGACCATTGAAGAGTACCAGAACCTTGTCAACGCCGAGG
AAGCCCCCTCAGGCATGATGTACCGTGGCCACTACAACGCCGTGTCCAAG
TTCGTCGACGATGACAACCACACCCACCTCCAGTTCGAGTGGTCCTTCGA
CATCGCCAAGGACTGGTAGGGAAGCTACGCTCCCAGCACCACCGACAAGC
CCGTCTACGAGAAGAAGTACAAGAACGACGAGTCTCTCAACCGCTGGAAG
GCCTCTCTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAATGATCC
CAGAAAGTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACGTCCCG
ATGTTGTGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCAAGGAC
AAGCCCTTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTCGTCTT
CCAGGTGCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGTGGTGA
AGCGCAAGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGATGCCTGAG
CACGAAGAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGA
GAAGAAGACCATTGAAGAGTACCAGAACCTTGTCAACGCCGAGGAAGCCC
CCTCAGGCATGATGTACCGTGGCCACTACAACGCCGTGTCCAAGTTCGTC
GACGATGACAACCACACCCACCTCCAGTTCGAGTGGTCCTTCGACATCGC
CAAGGACTGGTAGGGAAGCTACGCTCCCAGCACCACCGACAAGCCCGTCT
ACGAGAAGAAGTACAAGAACGACGAGTCTCTCAACCGCTGGAAGGCCTCT
CTGGGTCTGGCCACTGGAAATCCCATTGGCGACCCCAATGATCCCAGAAA
GTGCATCATCAAGTCCCTTGCCCTGGAGGTGCAGGGACGTCCCGATGTTG
TGATTGACCTGTCTACTCCCCATGCGCTCGAGACCCTCAAGGACAAGCCC
TTCACGATCAAGGAGGGCGCCACCTTCCACATCAAGGTCGTCTTCCAGGT
GCACCATGAGGTTCTGAGCGGTCTCAAGTACCTGCAGGTGGTGAAGCGCA
AGGGTATCAGAGTTAGCAAGGACGAGGAGATGCTGATGCCTGAGCACGAA
GAAGACCTCGTCGCCTCCCAGACCGAGGGTTTCAAGGTCGGAGAGAAGAA
GACCATTGAAGAGTACCAGAACCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005094Rho GDP-dissociation inhibitor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003802ATCC10864_003802Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003802-T1ATCC10864_003802-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003802-T1.cdsATCC10864_003802-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003802-T1.exon4ATCC10864_003802-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_003802-T1.exon3ATCC10864_003802-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003802-T1.exon2ATCC10864_003802-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003802-T1.exon1ATCC10864_003802-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02115
InterProIPR014756
InterProIPR000406
InterProIPR024792
Properties
Property NameValue
NoteBUSCO:EOG09264KK7
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:645888..646879 -
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