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ATCC10864_003804-T1, ATCC10864_003804-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003804-T1
Unique NameATCC10864_003804-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:651222..653058+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003804-T1 ID=ATCC10864_003804-T1|Name=ATCC10864_003804-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1837bp|location=Sequence derived from alignment at MCQH01000068:651222..653058+ (Aspergillus niger ATCC 10864)
ATGTCGCTCCCCGGTCTCGATCTAACACAACCCTCCGCGGACCGCGAGTT
CGCCCCAGCCCCGCCCTCTCAGATCAGCCTTCCCAAAGGCTCAGAGTGGC
GGTTCGAAGTCGCCTTTGGCACGACCGTCCGCGTAAAGGTGAGCTGCCGT
GACCCCCTCAGCACATTACCCATCCCTCACGAATCACCAAAAAAAAAAAG
ACAGTTGACTGACATATCTACCACCTGGAGAGCTAGCTCTTAGCCGGAAC
CGCCGAACTCTTTGGCACCGAACTAGCCCCCTCGCAAACCTACACCTTCT
CCGGCACGAAAGCAGCAATCTACACCTGGCATGGATGCACACTAGAAGTA
AGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCTCGCCCCGGGAGGCAC
AAATGGAACAACGGCGCGCGGACTCGGCGCGGGCGGCTGCCAGAGCGAGT
ACGTGGCGGAGGAAACACCGATGGTTGAATACGCGAACGTGCATTTTGCG
CTGGAGACACTACGACAGGAGGCCAAAGCGACAGGGAAAGATGGCCCGCG
GGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGACAAGTCTGTCGAAGA
TCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAGCCGCTGGTGGTTAAT
TTGGATCCCACGGAGGGCATGCTAAGTGTTCCGGGGACGTTGACGGCTAC
GGCGTTCCGGACGATGATTGATGTTGAGGAAGGATGGGGGAGTAGTCCCA
TGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCCTTGGTGTATTTCTAT
CCGATGCAGAACCCATTGGAGGCCGATGGCTCGGTGTATAAGGCTATTGT
GTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGGCGGAGGATGAGGATG
CAAGGGAGACGGGAATTATTGTGGATACGCCGGGAATATTGAGTCAGAGT
AAGGCTGGGAATGTCGAGATGATTAATCATATTGTGACGGAGTTTGCGAG
TGAGTTTTTACTTGATCCTGGTTGGAAGGGTGTATGCGCTGACGGGGTTA
TGGCACAGTTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACAGCA
TCATGATGAAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCAGCG
GCGTCGGATGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGGTTG
TGTTGATCGCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGATCC
GGACATACTTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCGCTG
TCGCTGTCTGCGTCGTCAACGACGAATGTTACTTTGTCGCCACATGCGCA
GCAGCTGGACTTTAACGCTTTAGCGGTCTACAACTACACCATAGCGTCAG
CAGAGGAGGACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGCGAT
GCCTTCCTCCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCCGCA
AGAAGAGGCTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGGTGA
AGGAGACGGTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAGGTA
CTGCCTCCTGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATCACACA
TGCAAGCTCGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCATGG
GCTTCTTGTACGTGGCGGACGTGGACGCGGAGAAGGGCAAGATCCGAGTG
CTGGCGCCGGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGGGAA
GAAATGGCCTGGGGAGGTGGTGGGATTGGTGGGATAG
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Coding sequence (CDS) from alignment at MCQH01000068:651222..653058+

>ATCC10864_003804-T1 ID=ATCC10864_003804-T1|Name=ATCC10864_003804-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5040bp|location=Sequence derived from alignment at MCQH01000068:651222..653058+ (Aspergillus niger ATCC 10864)
ATGTCGCTCCCCGGTCTCGATCTAACACAACCCTCCGCGGACCGCGAGTT
CGCCCCAGCCCCGCCCTCTCAGATCAGCCTTCCCAAAGGCTCAGAGTGGC
GGTTCGAAGTCGCCTTTGGCACGACCGTCCGCGTAAAGCTCTTAGCCGGA
ACCGCCGAACTCTTTGGCACCGAACTAGCCCCCTCGCAAACCTACACCTT
CTCCGGCACGAAAGCAGCAATCTACACCTGGCATGGATGCACACTAGAAG
TAAGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCTCGCCCCGGGAGGC
ACAAATGGAACAACGGCGCGCGGACTCGGCGCGGGCGGCTGCCAGAGCGA
GTACGTGGCGGAGGAAACACCGATGGTTGAATACGCGAACGTGCATTTTG
CGCTGGAGACACTACGACAGGAGGCCAAAGCGACAGGGAAAGATGGCCCG
CGGGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGACAAGTCTGTCGAA
GATCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAGCCGCTGGTGGTTA
ATTTGGATCCCACGGAGGGCATGCTAAGTGTTCCGGGGACGTTGACGGCT
ACGGCGTTCCGGACGATGATTGATGTTGAGGAAGGATGGGGGAGTAGTCC
CATGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCCTTGGTGTATTTCT
ATCCGATGCAGAACCCATTGGAGGCCGATGGCTCGGTGTATAAGGCTATT
GTGTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGGCGGAGGATGAGGA
TGCAAGGGAGACGGGAATTATTGTGGATACGCCGGGAATATTGAGTCAGA
GTAAGGCTGGGAATGTCGAGATGATTAATCATATTGTGACGGAGTTTGCG
ATTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACAGCATCATGAT
GAAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCAGCGGCGTCGG
ATGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGGTTGTGTTGAT
CGCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGATCCGGACATA
CTTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCGCTGTCGCTGT
CTGCGTCGTCAACGACGAATGTTACTTTGTCGCCACATGCGCAGCAGCTG
GACTTTAACGCTTTAGCGGTCTACAACTACACCATAGCGTCAGCAGAGGA
GGACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGCGATGCCTTCC
TCCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCCGCAAGAAGAG
GCTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGGTGAAGGAGAC
GGTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAGGTACTGCCTC
CTGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATCACACATGCAAGC
TCGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCATGGGCTTCTT
GTACGTGGCGGACGTGGACGCGGAGAAGGGCAAGATCCGAGTGCTGGCGC
CGGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGGGAAGAAATGG
CCTGGGGAGGTGGTGGGATTGGTGGGATAGATGTCGCTCCCCGGTCTCGA
TCTAACACAACCCTCCGCGGACCGCGAGTTCGCCCCAGCCCCGCCCTCTC
AGATCAGCCTTCCCAAAGGCTCAGAGTGGCGGTTCGAAGTCGCCTTTGGC
ACGACCGTCCGCGTAAAGCTCTTAGCCGGAACCGCCGAACTCTTTGGCAC
CGAACTAGCCCCCTCGCAAACCTACACCTTCTCCGGCACGAAAGCAGCAA
TCTACACCTGGCATGGATGCACACTAGAAGTAAGCGCCGGAGAGGCCATC
ACAGGTCTGGACAGCCTCGCCCCGGGAGGCACAAATGGAACAACGGCGCG
CGGACTCGGCGCGGGCGGCTGCCAGAGCGAGTACGTGGCGGAGGAAACAC
CGATGGTTGAATACGCGAACGTGCATTTTGCGCTGGAGACACTACGACAG
GAGGCCAAAGCGACAGGGAAAGATGGCCCGCGGGTACTGATTCTCGGTCC
TGAGGATGCGGGCAAGACAAGTCTGTCGAAGATCCTGACGGCGTATGCGA
CTAAGGTGGGCCGGCAGCCGCTGGTGGTTAATTTGGATCCCACGGAGGGC
ATGCTAAGTGTTCCGGGGACGTTGACGGCTACGGCGTTCCGGACGATGAT
TGATGTTGAGGAAGGATGGGGGAGTAGTCCCATGTCCGGGCCGAGTGCGG
TGCCGGTGAAGTTGCCCTTGGTGTATTTCTATCCGATGCAGAACCCATTG
GAGGCCGATGGCTCGGTGTATAAGGCTATTGTGTCGAGGTTGGCGCTGTC
GGTGACGGGGAGGATGGCGGAGGATGAGGATGCAAGGGAGACGGGAATTA
TTGTGGATACGCCGGGAATATTGAGTCAGAGTAAGGCTGGGAATGTCGAG
ATGATTAATCATATTGTGACGGAGTTTGCGATTACGACGATCTTGGTCAT
TGGCTCCGAGCGACTGTACAGCATCATGATGAAGAACTTTGATAACAAGC
CCACGGCTAGTGCGTCTGCAGCGGCGTCGGATGAGCGCATTTCGGTGGTT
AAGTTGTCCAAGTCTGGGGGTTGTGTTGATCGCGATGCGGCGTTCATGAA
GGCTGTCAGCGAGTCGCAGATCCGGACATACTTCTTCGGCAACCCAATTC
CTTCGACGGCATCGGCAGCGCTGTCGCTGTCTGCGTCGTCAACGACGAAT
GTTACTTTGTCGCCACATGCGCAGCAGCTGGACTTTAACGCTTTAGCGGT
CTACAACTACACCATAGCGTCAGCAGAGGAGGACGAAGACGAATATGACC
CGTCGCAGCTGGGTACCGGCGATGCCTTCCTCCCAGGTGGAAGCAACGAC
GTGGACCTGGGTCAGACTCCGCAAGAAGAGGCTCCGGTCGCACCGACGCT
GCCTGGGATCGCTGGACCGGTGAAGGAGACGGTGACGCCGGCGGGGTCGT
CCAACGTGCCACTGAAGAAGGTACTGCCTCCTGCGCCGACAGCGCTGGCC
AATTCGCTGCTGGCCATCACACATGCAAGCTCGACGGCCAGCCCGGCGGA
TGTGCGCGATGCCAGTATCATGGGCTTCTTGTACGTGGCGGACGTGGACG
CGGAGAAGGGCAAGATCCGAGTGCTGGCGCCGGTTGGAGGTCGCGTGCCA
CCGCGGGCGATTGTATGGGGGAAGAAATGGCCTGGGGAGGTGGTGGGATT
GGTGGGATAGATGTCGCTCCCCGGTCTCGATCTAACACAACCCTCCGCGG
ACCGCGAGTTCGCCCCAGCCCCGCCCTCTCAGATCAGCCTTCCCAAAGGC
TCAGAGTGGCGGTTCGAAGTCGCCTTTGGCACGACCGTCCGCGTAAAGCT
CTTAGCCGGAACCGCCGAACTCTTTGGCACCGAACTAGCCCCCTCGCAAA
CCTACACCTTCTCCGGCACGAAAGCAGCAATCTACACCTGGCATGGATGC
ACACTAGAAGTAAGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCTCGC
CCCGGGAGGCACAAATGGAACAACGGCGCGCGGACTCGGCGCGGGCGGCT
GCCAGAGCGAGTACGTGGCGGAGGAAACACCGATGGTTGAATACGCGAAC
GTGCATTTTGCGCTGGAGACACTACGACAGGAGGCCAAAGCGACAGGGAA
AGATGGCCCGCGGGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGACAA
GTCTGTCGAAGATCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAGCCG
CTGGTGGTTAATTTGGATCCCACGGAGGGCATGCTAAGTGTTCCGGGGAC
GTTGACGGCTACGGCGTTCCGGACGATGATTGATGTTGAGGAAGGATGGG
GGAGTAGTCCCATGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCCTTG
GTGTATTTCTATCCGATGCAGAACCCATTGGAGGCCGATGGCTCGGTGTA
TAAGGCTATTGTGTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGGCGG
AGGATGAGGATGCAAGGGAGACGGGAATTATTGTGGATACGCCGGGAATA
TTGAGTCAGAGTAAGGCTGGGAATGTCGAGATGATTAATCATATTGTGAC
GGAGTTTGCGATTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACA
GCATCATGATGAAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCA
GCGGCGTCGGATGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGG
TTGTGTTGATCGCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGA
TCCGGACATACTTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCG
CTGTCGCTGTCTGCGTCGTCAACGACGAATGTTACTTTGTCGCCACATGC
GCAGCAGCTGGACTTTAACGCTTTAGCGGTCTACAACTACACCATAGCGT
CAGCAGAGGAGGACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGC
GATGCCTTCCTCCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCC
GCAAGAAGAGGCTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGG
TGAAGGAGACGGTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAG
GTACTGCCTCCTGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATCAC
ACATGCAAGCTCGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCA
TGGGCTTCTTGTACGTGGCGGACGTGGACGCGGAGAAGGGCAAGATCCGA
GTGCTGGCGCCGGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGG
GAAGAAATGGCCTGGGGAGGTGGTGGGATTGGTGGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005849mRNA cleavage factor complex
Vocabulary: Biological Process
TermDefinition
GO:0031124mRNA 3'-end processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CLP1ATCC10864_003804Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003804-T1.exon1ATCC10864_003804-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003804-T1.exon2ATCC10864_003804-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003804-T1.exon3ATCC10864_003804-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003804-T1.cdsATCC10864_003804-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003804-T1ATCC10864_003804-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR010655
InterProIPR038238
InterProIPR027417
InterProIPR032324
InterProIPR032319
PFAMPF06807
PFAMPF16573
InterProIPR028606
PFAMPF16575
InterProIPR038239
Properties
Property NameValue
ProductCleavage polyadenylation factor subunit clp1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:651222..653058 +
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