You are here

ATCC10864_003828-T1, ATCC10864_003828-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003828-T1
Unique NameATCC10864_003828-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000069:17448..18239+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003828-T1 ID=ATCC10864_003828-T1|Name=ATCC10864_003828-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=792bp|location=Sequence derived from alignment at MCQH01000069:17448..18239+ (Aspergillus niger ATCC 10864)
ATGGACGACCAAGTGAGTCGACTGGTCGATAAAATCTGGAGTAAGTCTTC TTTTCCCCGGGGGGCGGGGAGCAACATGCTCCGCAATCAACCCCAGCAAG AAACTAACCAAATCTCCCCAGACAAATTCCAATCCACACCCAAAGACACC CGCCTATTAATTGCCATCAGCGGGATACCCGGGTCAGGCAAAACAGAGCT CGCAACTATGATGGCCAACCGCATCAACCGGCGCTACCTTACACAACACC CTGAGTCACCACAAGTCGCAACCAACGTGCCCATGGACGGCTACCATCTA ACCCGGGCTCAACTATCTGAGATGCCAGACCCGGCGTATGCCATCGCGCG TCGCGGCGCAGCGTTCACCTTCGACGGGGAAAAGTTTCTGCAGCTGGTCC GGGCGTTGCGGGAACAGGTGACGCCTGAGACGCAGAGTCTGTATGCACCG AGCTTTGATCATGCGGTGAAAGACCCGGTTGACGACGATATACTAATCCC GGCGTCGTGTCGGGTGATATTCTTTGAGGGAAATTACTTGAGCTTGAATA AGGAGCCGTGGAATCGGGCGGCTGAGTTGATGGATGAGTTGTGGTTTGTG GAGGTGGATTTTGAGGTCGCGAAGAAGAGGTTAATTAAAAGGCATGTTAA GGCCGGGATTGCGAGTGATGAGGCGGAGGCGGAGAAGAGGGTCTTGGAGA ATGACCTGGTAAATGGGAAGGAGATTGTTGATTATAGGTTAGATCTGCAA GAGTTGGTCGTTAGTCGGTATGATCCTGCGTGGGATGCATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000069:17448..18239+

>ATCC10864_003828-T1 ID=ATCC10864_003828-T1|Name=ATCC10864_003828-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1422bp|location=Sequence derived from alignment at MCQH01000069:17448..18239+ (Aspergillus niger ATCC 10864)
ATGGACGACCAAGTGAGTCGACTGGTCGATAAAATCTGGAACAAATTCCA
ATCCACACCCAAAGACACCCGCCTATTAATTGCCATCAGCGGGATACCCG
GGTCAGGCAAAACAGAGCTCGCAACTATGATGGCCAACCGCATCAACCGG
CGCTACCTTACACAACACCCTGAGTCACCACAAGTCGCAACCAACGTGCC
CATGGACGGCTACCATCTAACCCGGGCTCAACTATCTGAGATGCCAGACC
CGGCGTATGCCATCGCGCGTCGCGGCGCAGCGTTCACCTTCGACGGGGAA
AAGTTTCTGCAGCTGGTCCGGGCGTTGCGGGAACAGGTGACGCCTGAGAC
GCAGAGTCTGTATGCACCGAGCTTTGATCATGCGGTGAAAGACCCGGTTG
ACGACGATATACTAATCCCGGCGTCGTGTCGGGTGATATTCTTTGAGGGA
AATTACTTGAGCTTGAATAAGGAGCCGTGGAATCGGGCGGCTGAGTTGAT
GGATGAGTTGTGGTTTGTGGAGGTGGATTTTGAGGTCGCGAAGAAGAGGT
TAATTAAAAGGCATGTTAAGGCCGGGATTGCGAGTGATGAGGCGGAGGCG
GAGAAGAGGGTCTTGGAGAATGACCTGGTAAATGGGAAGGAGATTGTTGA
TTATAGGTTAGATCTGCAAGAGTTGGTCGTTAGTCGGTATGATCCTGCGT
GGGATGCATGAATGGACGACCAAGTGAGTCGACTGGTCGATAAAATCTGG
AACAAATTCCAATCCACACCCAAAGACACCCGCCTATTAATTGCCATCAG
CGGGATACCCGGGTCAGGCAAAACAGAGCTCGCAACTATGATGGCCAACC
GCATCAACCGGCGCTACCTTACACAACACCCTGAGTCACCACAAGTCGCA
ACCAACGTGCCCATGGACGGCTACCATCTAACCCGGGCTCAACTATCTGA
GATGCCAGACCCGGCGTATGCCATCGCGCGTCGCGGCGCAGCGTTCACCT
TCGACGGGGAAAAGTTTCTGCAGCTGGTCCGGGCGTTGCGGGAACAGGTG
ACGCCTGAGACGCAGAGTCTGTATGCACCGAGCTTTGATCATGCGGTGAA
AGACCCGGTTGACGACGATATACTAATCCCGGCGTCGTGTCGGGTGATAT
TCTTTGAGGGAAATTACTTGAGCTTGAATAAGGAGCCGTGGAATCGGGCG
GCTGAGTTGATGGATGAGTTGTGGTTTGTGGAGGTGGATTTTGAGGTCGC
GAAGAAGAGGTTAATTAAAAGGCATGTTAAGGCCGGGATTGCGAGTGATG
AGGCGGAGGCGGAGAAGAGGGTCTTGGAGAATGACCTGGTAAATGGGAAG
GAGATTGTTGATTATAGGTTAGATCTGCAAGAGTTGGTCGTTAGTCGGTA
TGATCCTGCGTGGGATGCATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003828ATCC10864_003828Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003828-T1.exon1ATCC10864_003828-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003828-T1.exon2ATCC10864_003828-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003828-T1.cdsATCC10864_003828-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003828-T1ATCC10864_003828-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027417
Properties
Property NameValue
NoteantiSMASH:Cluster_1000069.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000069supercontigMCQH01000069:17448..18239 +