You are here

Home

ATCC10864_003864-T1, ATCC10864_003864-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003864-T1
Unique NameATCC10864_003864-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000069:172335..173380-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003864-T1 ID=ATCC10864_003864-T1|Name=ATCC10864_003864-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1046bp|location=Sequence derived from alignment at MCQH01000069:172335..173380- (Aspergillus niger ATCC 10864)
ATGGCGACCACGTTGGCTGATCACAAACGTCCTCAATTACAGCCCGTGTG
CCAGAATTGCGGCACTTCTACGACACCTCTCTGGCGCAGGGACGAACTCG
GCTCCGTCCTTTGCAACGCCTGTGGCTTGTTCCTCAAACTACATGGCAGG
CCCCGTCCGATAAGCTTAAAGACCGATGTCATCAAAAGTCGCAACCGGGT
CAAGACTGCTGGTCAGGGCCCCAAGCGTAAGGTGAGTCTGTCGTCTAGAA
AATTTTTCCCTGGCTGTCCTATGTCTTTGTACACCTGAGATAACGATCGC
TAACATTCCTATGAATGTCTTATCAGTCCGGCGGTGCTATCGATACGAAT
GGCTTGTCTACCTCGAGGTCCGAAGCAGGGACGCCGCCCATGGGGTCCCA
AGGATACCGTCGCGCGTCGCGAAAGGCATCACCGGGCCATTCCGACCGAT
CCAACTCACCCGTCTCCCGTACCGAAACGCCTGGTATCCCTTCCATGCAA
CAACCACACCCTCAGTCGCAACACAATGCCAACATTGCGCCTCAGCACAT
GTTCGATAGCGTCACAATCGGCGACCATGGGCTCAATCAGCCGAATGCGC
TGCCCTCGGTGCAGCCACGCCAGCCGTCGCCCACGGCGACCTCGGCGGCT
GTCGACCGCCATCTCGAGTCACCACAGACATACGATGGACTGCTCGCAGC
CAATACCTCGTTGAAGACTCGCGTGAGCGAATTGGAGTTTATCAATGAAC
TGTTCCGGGGCCGGGTGACGGAACTGGAGCAGAGCGGCGCGACTGCGCGC
CGATCGGAGATGATCGTCCGGGACTCGGAGGTACGGCTCCGGCGGTCTCT
GGAGGAGGCCCAACGGCGCGAAGACGATCTGAAACGGAGGATATCTGAGC
TGGAGCGACAGCTTACCGACCAAACCTCCTCTGCCAACCCGGCGGGCAAT
GACAGTCCCGGTGAGCCGCTGGCCAAGCGGATGCGGCTGTCCGACGTCGT
GGAGCAACCTGCGGAGTCGCCAACAAAATCCCCCAAGAGTGTCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000069:172335..173380-

>ATCC10864_003864-T1 ID=ATCC10864_003864-T1|Name=ATCC10864_003864-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1902bp|location=Sequence derived from alignment at MCQH01000069:172335..173380- (Aspergillus niger ATCC 10864)
TCCGGCGGTGCTATCGATACGAATGGCTTGTCTACCTCGAGGTCCGAAGC
AGGGACGCCGCCCATGGGGTCCCAAGGATACCGTCGCGCGTCGCGAAAGG
CATCACCGGGCCATTCCGACCGATCCAACTCACCCGTCTCCCGTACCGAA
ACGCCTGGTATCCCTTCCATGCAACAACCACACCCTCAGTCGCAACACAA
TGCCAACATTGCGCCTCAGCACATGTTCGATAGCGTCACAATCGGCGACC
ATGGGCTCAATCAGCCGAATGCGCTGCCCTCGGTGCAGCCACGCCAGCCG
TCGCCCACGGCGACCTCGGCGGCTGTCGACCGCCATCTCGAGTCACCACA
GACATACGATGGACTGCTCGCAGCCAATACCTCGTTGAAGACTCGCGTGA
GCGAATTGGAGTTTATCAATGAACTGTTCCGGGGCCGGGTGACGGAACTG
GAGCAGAGCGGCGCGACTGCGCGCCGATCGGAGATGATCGTCCGGGACTC
GGAGGTACGGCTCCGGCGGTCTCTGGAGGAGGCCCAACGGCGCGAAGACG
ATCTGAAACGGAGGATATCTGAGCTGGAGCGACAGCTTACCGACCAAACC
TCCTCTGCCAACCCGGCGGGCAATGACAGTCCCGGTGAGCCGCTGGCCAA
GCGGATGCGGCTGTCCGACGTCGTGGAGCAACCTGCGGAGTCGCCAACAA
AATCCCCCAAGAGTGTCTAAATGGCGACCACGTTGGCTGATCACAAACGT
CCTCAATTACAGCCCGTGTGCCAGAATTGCGGCACTTCTACGACACCTCT
CTGGCGCAGGGACGAACTCGGCTCCGTCCTTTGCAACGCCTGTGGCTTGT
TCCTCAAACTACATGGCAGGCCCCGTCCGATAAGCTTAAAGACCGATGTC
ATCAAAAGTCGCAACCGGGTCAAGACTGCTGGTCAGGGCCCCAAGCGTAA
GTCCGGCGGTGCTATCGATACGAATGGCTTGTCTACCTCGAGGTCCGAAG
CAGGGACGCCGCCCATGGGGTCCCAAGGATACCGTCGCGCGTCGCGAAAG
GCATCACCGGGCCATTCCGACCGATCCAACTCACCCGTCTCCCGTACCGA
AACGCCTGGTATCCCTTCCATGCAACAACCACACCCTCAGTCGCAACACA
ATGCCAACATTGCGCCTCAGCACATGTTCGATAGCGTCACAATCGGCGAC
CATGGGCTCAATCAGCCGAATGCGCTGCCCTCGGTGCAGCCACGCCAGCC
GTCGCCCACGGCGACCTCGGCGGCTGTCGACCGCCATCTCGAGTCACCAC
AGACATACGATGGACTGCTCGCAGCCAATACCTCGTTGAAGACTCGCGTG
AGCGAATTGGAGTTTATCAATGAACTGTTCCGGGGCCGGGTGACGGAACT
GGAGCAGAGCGGCGCGACTGCGCGCCGATCGGAGATGATCGTCCGGGACT
CGGAGGTACGGCTCCGGCGGTCTCTGGAGGAGGCCCAACGGCGCGAAGAC
GATCTGAAACGGAGGATATCTGAGCTGGAGCGACAGCTTACCGACCAAAC
CTCCTCTGCCAACCCGGCGGGCAATGACAGTCCCGGTGAGCCGCTGGCCA
AGCGGATGCGGCTGTCCGACGTCGTGGAGCAACCTGCGGAGTCGCCAACA
AAATCCCCCAAGAGTGTCTAAATGGCGACCACGTTGGCTGATCACAAACG
TCCTCAATTACAGCCCGTGTGCCAGAATTGCGGCACTTCTACGACACCTC
TCTGGCGCAGGGACGAACTCGGCTCCGTCCTTTGCAACGCCTGTGGCTTG
TTCCTCAAACTACATGGCAGGCCCCGTCCGATAAGCTTAAAGACCGATGT
CATCAAAAGTCGCAACCGGGTCAAGACTGCTGGTCAGGGCCCCAAGCGTA
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003864ATCC10864_003864Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003864-T1ATCC10864_003864-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003864-T1.cdsATCC10864_003864-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003864-T1.exon2ATCC10864_003864-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003864-T1.exon1ATCC10864_003864-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000679
InterProIPR039355
InterProIPR013088
PFAMPF00320
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000069supercontigMCQH01000069:172335..173380 -
Powered by Drupal