You are here

Home

ATCC10864_003869-T1, ATCC10864_003869-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003869-T1
Unique NameATCC10864_003869-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000069:188051..188755-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003869-T1 ID=ATCC10864_003869-T1|Name=ATCC10864_003869-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=705bp|location=Sequence derived from alignment at MCQH01000069:188051..188755- (Aspergillus niger ATCC 10864)
ATGCTTCTCGACGAGAATCCCGCTGGTGTATGTTACTTTTGCCCCTTCAT
CATGCCCCACTGCTGACTCTCCAGCTCATCAACCACACCATCGGCAACTT
CAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGACTCGCTCG
CCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAATCGGCC
CTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCATGAGGA
GGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATGGTCGAGC
TGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGAGCTGGAGATT
GAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCGACTGGC
CGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCCGCGAGC
GCGAGATGGATGATGCGACGCTGTGAGTACTTCTCATTTGTTTGACTTGT
AGTACCCGGAGGCTGACTATTTGGTAGGCTGCGATTGAAAATCTACCGGT
CCTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGCG
GTGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACCC
GAAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAGG
GGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000069:188051..188755-

>ATCC10864_003869-T1 ID=ATCC10864_003869-T1|Name=ATCC10864_003869-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1809bp|location=Sequence derived from alignment at MCQH01000069:188051..188755- (Aspergillus niger ATCC 10864)
GCTGCGATTGAAAATCTACCGGTCCTTGGGCGTGGATATCGAGGCGGACG
ATGCAGGCAACTTCACCAAGGCGGTGATCCGCAATAGTCGCAAGGGCGAT
GTGCATGTGGTGAACATTGACCCGAAGTTCTCGCGGTTCTTCTATTCGAA
CTACTTCTGGTCGACGATGCAGGGGTAGCTCATCAACCACACCATCGGCA
ACTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGACTCG
CTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAATC
GGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCATG
AGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATGGTC
GAGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGAGCTGGA
GATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCGAC
TGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCCGC
GAGCGCGAGATGGATGATGCGACGCTATGCTTCTCGACGAGAATCCCGCT
GGTGCTGCGATTGAAAATCTACCGGTCCTTGGGCGTGGATATCGAGGCGG
ACGATGCAGGCAACTTCACCAAGGCGGTGATCCGCAATAGTCGCAAGGGC
GATGTGCATGTGGTGAACATTGACCCGAAGTTCTCGCGGTTCTTCTATTC
GAACTACTTCTGGTCGACGATGCAGGGGTAGCTCATCAACCACACCATCG
GCAACTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGAC
TCGCTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGA
ATCGGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGC
ATGAGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAGATG
GTCGAGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGAGCT
GGAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGC
GACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGC
CGCGAGCGCGAGATGGATGATGCGACGCTATGCTTCTCGACGAGAATCCC
GCTGGTGCTGCGATTGAAAATCTACCGGTCCTTGGGCGTGGATATCGAGG
CGGACGATGCAGGCAACTTCACCAAGGCGGTGATCCGCAATAGTCGCAAG
GGCGATGTGCATGTGGTGAACATTGACCCGAAGTTCTCGCGGTTCTTCTA
TTCGAACTACTTCTGGTCGACGATGCAGGGGTAGCTCATCAACCACACCA
TCGGCAACTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAAT
GACTCGCTCGCCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGC
CGAATCGGCCCTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCC
AGCATGAGGAGGCCGTGACGGCGCATGACTCTGGCAAGCACGCGGCGGAG
ATGGTCGAGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGA
GCTGGAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGG
AGCGACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACG
CGCCGCGAGCGCGAGATGGATGATGCGACGCTATGCTTCTCGACGAGAAT
CCCGCTGGT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPC24ATCC10864_003869Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003869-T1ATCC10864_003869-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003869-T1.cdsATCC10864_003869-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003869-T1.exon3ATCC10864_003869-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003869-T1.exon2ATCC10864_003869-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003869-T1.exon1ATCC10864_003869-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038066
InterProIPR013252
PFAMPF08286
Properties
Property NameValue
Productkinetochore-associated Ndc80 complex subunit spc24
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000069supercontigMCQH01000069:188051..188755 -
Powered by Drupal