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ATCC10864_003904-T1, ATCC10864_003904-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003904-T1
Unique NameATCC10864_003904-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000069:298068..299370+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003904-T1 ID=ATCC10864_003904-T1|Name=ATCC10864_003904-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1303bp|location=Sequence derived from alignment at MCQH01000069:298068..299370+ (Aspergillus niger ATCC 10864)
ATGCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCC
GAGCATGGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGG
CTGCTGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTG
CACGGGAATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTC
CAGCAAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAA
TCAGACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCT
CGTACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGA
AGATGACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATG
CGCCAGGTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATG
GATGATGCGCCGCCGCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGC
GGCAGCGGCAGCGCCGAGCGGGAAGGCCGTCAAAAGTGTAGAGGCAAAAG
AGATGGAACTGGATGATGACGACGAGGACGACGACGATGAGGAGCTCTCG
GAGCTGGAGTCAGACGCTGAAGGCGAGCCAGACGATCAAGACGAAAGTAT
GATGGCCAATGGTGGCGCAGAGGATTTAGAAGGAGAAGAGGAGGAAGAGG
ATGACGACCTGGACAGCGATGACGATACCCCGACCGCCGATCTGAGCAAG
ATGACCAAACGGCAAAGGGGAAACCTGGGTAACGACTTCCTGCAACTTCC
TATGGGTGAGTCTTCATGTTTCGCATGGTCATTGAAAGCATCATAAGTCT
GACTGAGAGCAGAACCCCAGGTGAAAAAGCACCTGACGGCCGAGGAGCGC
GCTATGCGTCGTGCCGAAATGGCTCGTCGTAGAAAGAACCTCAGCGAGAA
GCGGAATGAGGAGGAGAAGGTACGTACCATCTAGGGTTCTGCAAACTGCA
GCGGGGTGGGCTTTTCTGTACTTCGAGTCGATGCTGACATGAGACTCACA
GATGGACACCATCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAG
GACGCATTCCAGCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAG
GTCGCGGAACCCGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGG
CCGCGAAGGCAGCCGAGTAGGTGTGCCAGAAGAATGGCTCGGTATACCTG
CAGGACGTGTCTTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTA
TAA
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Coding sequence (CDS) from alignment at MCQH01000069:298068..299370+

>ATCC10864_003904-T1 ID=ATCC10864_003904-T1|Name=ATCC10864_003904-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3492bp|location=Sequence derived from alignment at MCQH01000069:298068..299370+ (Aspergillus niger ATCC 10864)
ATGCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGGCGGGATGACCAGCC
GAGCATGGATGCTAACATGAACACCAGATCTACGAGAGCTGCCGCCCGGG
CTGCTGTCTCCACCCCAGCGGTGACCATTTCACGCGTTGCATCTGAGTTG
CACGGGAATTCCACTCATAGGTCTATCCATTTGACAGTAAAGATGCCGTC
CAGCAAACTTCGTGAAGTTACCAGTGGTAGCACCCGAAGTGGTGCATCAA
TCAGACGTTCGGTTAATGTCTTTACGGAGAATCCCATTGTGACGGGTCCT
CGTACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTGGACACAAGCGATGA
AGATGACCTGGAAGACCAGGAAGAAGATGAGGTGGACGACGATGAAGATG
CGCCAGGTGAAGACGACGATGACGTAGATGCCGATGGCGATTTAGACATG
GATGATGCGCCGCCGCAGCCACCAGTGTCAAAACGGCAGGCGAAAGCAGC
GGCAGCGGCAGCGCCGAGCGGGAAGGCCGTCAAAAGTGTAGAGGCAAAAG
AGATGGAACTGGATGATGACGACGAGGACGACGACGATGAGGAGCTCTCG
GAGCTGGAGTCAGACGCTGAAGGCGAGCCAGACGATCAAGACGAAAGTAT
GATGGCCAATGGTGGCGCAGAGGATTTAGAAGGAGAAGAGGAGGAAGAGG
ATGACGACCTGGACAGCGATGACGATACCCCGACCGCCGATCTGAGCAAG
ATGACCAAACGGCAAAGGGGAAACCTGGGTAACGACTTCCTGCAACTTCC
TATGGAACCCCAGGTGAAAAAGCACCTGACGGCCGAGGAGCGCGCTATGC
GTCGTGCCGAAATGGCTCGTCGTAGAAAGAACCTCAGCGAGAAGCGGAAT
GAGGAGGAGAAGATGGACACCATCAACAGGCTTCTACGGAAGCAGGCACC
CAAGCGACGAGGACGCATTCCAGCTGCAGAGACAGCCGAAGCAGCTTCTG
CAGAGCAGGAGGTCGCGGAACCCGAGAAACCGGACCCGACGATGGTGAGG
TGGGTAAGTGGCCGCGAAGGCAGCCGAGTAGGTGTGCCAGAAGAATGGCT
CGGTATACCTGCAGGACGTGTCTTTGATGGCAATGGCTCGGGCAAGCTCG
TGCAAGAGGTATAAATGCTTTTGCGTCGCTCACTACGTTCCCGCTTGGGG
CGGGATGACCAGCCGAGCATGGATGCTAACATGAACACCAGATCTACGAG
AGCTGCCGCCCGGGCTGCTGTCTCCACCCCAGCGGTGACCATTTCACGCG
TTGCATCTGAGTTGCACGGGAATTCCACTCATAGGTCTATCCATTTGACA
GTAAAGATGCCGTCCAGCAAACTTCGTGAAGTTACCAGTGGTAGCACCCG
AAGTGGTGCATCAATCAGACGTTCGGTTAATGTCTTTACGGAGAATCCCA
TTGTGACGGGTCCTCGTACCAGCAGACCCAAAAAGAAGCTTGTGGAAGTG
GACACAAGCGATGAAGATGACCTGGAAGACCAGGAAGAAGATGAGGTGGA
CGACGATGAAGATGCGCCAGGTGAAGACGACGATGACGTAGATGCCGATG
GCGATTTAGACATGGATGATGCGCCGCCGCAGCCACCAGTGTCAAAACGG
CAGGCGAAAGCAGCGGCAGCGGCAGCGCCGAGCGGGAAGGCCGTCAAAAG
TGTAGAGGCAAAAGAGATGGAACTGGATGATGACGACGAGGACGACGACG
ATGAGGAGCTCTCGGAGCTGGAGTCAGACGCTGAAGGCGAGCCAGACGAT
CAAGACGAAAGTATGATGGCCAATGGTGGCGCAGAGGATTTAGAAGGAGA
AGAGGAGGAAGAGGATGACGACCTGGACAGCGATGACGATACCCCGACCG
CCGATCTGAGCAAGATGACCAAACGGCAAAGGGGAAACCTGGGTAACGAC
TTCCTGCAACTTCCTATGGAACCCCAGGTGAAAAAGCACCTGACGGCCGA
GGAGCGCGCTATGCGTCGTGCCGAAATGGCTCGTCGTAGAAAGAACCTCA
GCGAGAAGCGGAATGAGGAGGAGAAGATGGACACCATCAACAGGCTTCTA
CGGAAGCAGGCACCCAAGCGACGAGGACGCATTCCAGCTGCAGAGACAGC
CGAAGCAGCTTCTGCAGAGCAGGAGGTCGCGGAACCCGAGAAACCGGACC
CGACGATGGTGAGGTGGGTAAGTGGCCGCGAAGGCAGCCGAGTAGGTGTG
CCAGAAGAATGGCTCGGTATACCTGCAGGACGTGTCTTTGATGGCAATGG
CTCGGGCAAGCTCGTGCAAGAGGTATAAATGCTTTTGCGTCGCTCACTAC
GTTCCCGCTTGGGGCGGGATGACCAGCCGAGCATGGATGCTAACATGAAC
ACCAGATCTACGAGAGCTGCCGCCCGGGCTGCTGTCTCCACCCCAGCGGT
GACCATTTCACGCGTTGCATCTGAGTTGCACGGGAATTCCACTCATAGGT
CTATCCATTTGACAGTAAAGATGCCGTCCAGCAAACTTCGTGAAGTTACC
AGTGGTAGCACCCGAAGTGGTGCATCAATCAGACGTTCGGTTAATGTCTT
TACGGAGAATCCCATTGTGACGGGTCCTCGTACCAGCAGACCCAAAAAGA
AGCTTGTGGAAGTGGACACAAGCGATGAAGATGACCTGGAAGACCAGGAA
GAAGATGAGGTGGACGACGATGAAGATGCGCCAGGTGAAGACGACGATGA
CGTAGATGCCGATGGCGATTTAGACATGGATGATGCGCCGCCGCAGCCAC
CAGTGTCAAAACGGCAGGCGAAAGCAGCGGCAGCGGCAGCGCCGAGCGGG
AAGGCCGTCAAAAGTGTAGAGGCAAAAGAGATGGAACTGGATGATGACGA
CGAGGACGACGACGATGAGGAGCTCTCGGAGCTGGAGTCAGACGCTGAAG
GCGAGCCAGACGATCAAGACGAAAGTATGATGGCCAATGGTGGCGCAGAG
GATTTAGAAGGAGAAGAGGAGGAAGAGGATGACGACCTGGACAGCGATGA
CGATACCCCGACCGCCGATCTGAGCAAGATGACCAAACGGCAAAGGGGAA
ACCTGGGTAACGACTTCCTGCAACTTCCTATGGAACCCCAGGTGAAAAAG
CACCTGACGGCCGAGGAGCGCGCTATGCGTCGTGCCGAAATGGCTCGTCG
TAGAAAGAACCTCAGCGAGAAGCGGAATGAGGAGGAGAAGATGGACACCA
TCAACAGGCTTCTACGGAAGCAGGCACCCAAGCGACGAGGACGCATTCCA
GCTGCAGAGACAGCCGAAGCAGCTTCTGCAGAGCAGGAGGTCGCGGAACC
CGAGAAACCGGACCCGACGATGGTGAGGTGGGTAAGTGGCCGCGAAGGCA
GCCGAGTAGGTGTGCCAGAAGAATGGCTCGGTATACCTGCAGGACGTGTC
TTTGATGGCAATGGCTCGGGCAAGCTCGTGCAAGAGGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Vocabulary: Cellular Component
TermDefinition
GO:0031011Ino80 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003904ATCC10864_003904Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003904-T1.exon1ATCC10864_003904-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003904-T1.exon2ATCC10864_003904-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003904-T1.exon3ATCC10864_003904-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003904-T1.cdsATCC10864_003904-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003904-T1ATCC10864_003904-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04795
InterProIPR029523
InterProIPR006880
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000069supercontigMCQH01000069:298068..299370 +
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