You are here

Home

ATCC10864_003979-T1, ATCC10864_003979-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003979-T1
Unique NameATCC10864_003979-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000069:496481..498164+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003979-T1 ID=ATCC10864_003979-T1|Name=ATCC10864_003979-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1684bp|location=Sequence derived from alignment at MCQH01000069:496481..498164+ (Aspergillus niger ATCC 10864)
ATGAATATGAGCGACTCAGACACGGCTTTAGTCCCCTGGGAGACTGTCAA
CGATGAGTTTTTTGGATCTCAGTGTGACTCGACCGCCCCGCAGATAACAT
CGCTGCTCTCGGCTTGCTCGTATCCCGTGCCCCAACAGATCAGGAGACAA
CGAAATGCCCAATTCCCACTTCTTGGTGGAATCATACCGGAAAACCAACT
GCTTCTTTACAATAACGACACCCAACCGGCTGAACCGGCAGTAAAGTCTC
TGAAACGCACTCGCAGTGACGTAGATAAGCGCGGCTCAACATCACTCACC
AAAAGGGGTCGACCGCGAAAAGTAGTCGATGACACCGCAGATGAAGATCC
AGAAGAGGTAGGCGAGGCTCTGTTCGTTTGTGCGCTACTACCGGGACATT
GATCAACTTGAGCAGAGACGTCGGAGACAGATCCGACTTGCGCAACGCGC
ATATCGTTCACGAAAAGAGGCCAACCTCTCGTCTTTGAAAGGTCGCATCT
CGGAACTCGAAGGCATCGTGGAAAAAATGAGCACGGCTGTTTTATCGCTC
AGTGACGAGCTGGTTCAGTCAGGAGTGTTGGCATCACATGCGGGTCTGAC
AGAGCAATTGCGCGATACCGTACAGACATGTCTCACCCTAGCCAGAGAGG
CTAGCAATGATAGCCCTCAGGAGGTTACGATGATTTCGCCACCCCAAACC
GAAGATGGCTTGCCAGATTTTCTGGCGCATGAACAGCACAGACAATCAGC
ACAGATTGTGGAACTGGACGAGAGCGTTTCCCCCATCTTAGAGCCTAGTC
TACAGCTGGAGCTTAGGCAGACGCGGAACAGAAACATTCCTCGCTTCTTC
GAGTCACTTGAAACAGCCGAAATGGACTTGACTGTGTTCACAGATAGACT
CCACATGTCATGTGTCTATCAAGGGTGTTTCGCCCTTTGTGACGAATCCA
TCAGTATAGACCGGATACGGAAGCATTTCTGCCTACTACTTCAGATTATG
GACAGGAATCGTATCGCGTCATATTTTCAAGCCGCGCTCAATGAGAAAGA
GAGTCGAAGATATTTTGAGGAGTGGGAAGAGGTACCCTTCTTCAGTCTGG
GGGGCGCAGGAACCCATTACTCTCGATCTTCCCTGAAGTGTAAAGCAGCT
GATCGTCCATTCCGGCCTGGAGTGCGGTGGGTTTCCGTGCGATCACTATC
GCACTTTCCGCAAGATATACAGACCAAGCTTGAAGGGGACTGGTTCGACA
TGGGTGACCTGGAAGGATACCTGCGGGAGCATGATGTACATCTTCTCGCA
TATCCTCCCATGGATCACGCGCGCCATCGCCTCAAGGGAACAGCGATCAA
TGCAGCACGTTTCATACAGGGTATGACCTTCTTGATTCTGCTCCTTGCTT
TTCAGTCATAAATACTCACTTATTGGTAGCACTGTCCGCAAATGCAATAT
GCCTTGGGTGGACGCCGGGGTTCCGTCGCCGTGACGTGGAGAACGCTCTC
CAGACCTGTGTATGGAGATGAGGTAATGGCTGCATCTTACGAGAATGTGG
CTTACATTACTACCATGATTTATGAACATAGCTAGTCTGATTTTTCATAC
ACCTCGGAGGATGCCTCTGGGTCACCGGACATCTCTTTTGCGGGATTTAG
CGAGCGACTCGCAAGACAGACCATTGAAGCATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000069:496481..498164+

>ATCC10864_003979-T1 ID=ATCC10864_003979-T1|Name=ATCC10864_003979-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5964bp|location=Sequence derived from alignment at MCQH01000069:496481..498164+ (Aspergillus niger ATCC 10864)
ATGAATATGAGCGACTCAGACACGGCTTTAGTCCCCTGGGAGACTGTCAA
CGATGAGTTTTTTGGATCTCAGTGTGACTCGACCGCCCCGCAGATAACAT
CGCTGCTCTCGGCTTGCTCGTATCCCGTGCCCCAACAGATCAGGAGACAA
CGAAATGCCCAATTCCCACTTCTTGGTGGAATCATACCGGAAAACCAACT
GCTTCTTTACAATAACGACACCCAACCGGCTGAACCGGCAGTAAAGTCTC
TGAAACGCACTCGCAGTGACGTAGATAAGCGCGGCTCAACATCACTCACC
AAAAGGGGTCGACCGCGAAAAGTAGTCGATGACACCGCAGATGAAGATCC
AGAAGAGAGACGTCGGAGACAGATCCGACTTGCGCAACGCGCATATCGTT
CACGAAAAGAGGCCAACCTCTCGTCTTTGAAAGGTCGCATCTCGGAACTC
GAAGGCATCGTGGAAAAAATGAGCACGGCTGTTTTATCGCTCAGTGACGA
GCTGGTTCAGTCAGGAGTGTTGGCATCACATGCGGGTCTGACAGAGCAAT
TGCGCGATACCGTACAGACATGTCTCACCCTAGCCAGAGAGGCTAGCAAT
GATAGCCCTCAGGAGGTTACGATGATTTCGCCACCCCAAACCGAAGATGG
CTTGCCAGATTTTCTGGCGCATGAACAGCACAGACAATCAGCACAGATTG
TGGAACTGGACGAGAGCGTTTCCCCCATCTTAGAGCCTAGTCTACAGCTG
GAGCTTAGGCAGACGCGGAACAGAAACATTCCTCGCTTCTTCGAGTCACT
TGAAACAGCCGAAATGGACTTGACTGTGTTCACAGATAGACTCCACATGT
CATGTGTCTATCAAGGGTGTTTCGCCCTTTGTGACGAATCCATCAGTATA
GACCGGATACGGAAGCATTTCTGCCTACTACTTCAGATTATGGACAGGAA
TCGTATCGCGTCATATTTTCAAGCCGCGCTCAATGAGAAAGAGAGTCGAA
GATATTTTGAGGAGTGGGAAGAGGTACCCTTCTTCAGTCTGGGGGGCGCA
GGAACCCATTACTCTCGATCTTCCCTGAAGTGTAAAGCAGCTGATCGTCC
ATTCCGGCCTGGAGTGCGGTGGGTTTCCGTGCGATCACTATCGCACTTTC
CGCAAGATATACAGACCAAGCTTGAAGGGGACTGGTTCGACATGGGTGAC
CTGGAAGGATACCTGCGGGAGCATGATGTACATCTTCTCGCATATCCTCC
CATGGATCACGCGCGCCATCGCCTCAAGGGAACAGCGATCAATGCAGCAC
GTTTCATACAGGCACTGTCCGCAAATGCAATATGCCTTGGGTGGACGCCG
GGGTTCCGTCGCCGTGACGTGGAGAACGCTCTCCAGACCTGTTCTGATTT
TTCATACACCTCGGAGGATGCCTCTGGGTCACCGGACATCTCTTTTGCGG
GATTTAGCGAGCGACTCGCAAGACAGACCATTGAAGCATAAATGAATATG
AGCGACTCAGACACGGCTTTAGTCCCCTGGGAGACTGTCAACGATGAGTT
TTTTGGATCTCAGTGTGACTCGACCGCCCCGCAGATAACATCGCTGCTCT
CGGCTTGCTCGTATCCCGTGCCCCAACAGATCAGGAGACAACGAAATGCC
CAATTCCCACTTCTTGGTGGAATCATACCGGAAAACCAACTGCTTCTTTA
CAATAACGACACCCAACCGGCTGAACCGGCAGTAAAGTCTCTGAAACGCA
CTCGCAGTGACGTAGATAAGCGCGGCTCAACATCACTCACCAAAAGGGGT
CGACCGCGAAAAGTAGTCGATGACACCGCAGATGAAGATCCAGAAGAGAG
ACGTCGGAGACAGATCCGACTTGCGCAACGCGCATATCGTTCACGAAAAG
AGGCCAACCTCTCGTCTTTGAAAGGTCGCATCTCGGAACTCGAAGGCATC
GTGGAAAAAATGAGCACGGCTGTTTTATCGCTCAGTGACGAGCTGGTTCA
GTCAGGAGTGTTGGCATCACATGCGGGTCTGACAGAGCAATTGCGCGATA
CCGTACAGACATGTCTCACCCTAGCCAGAGAGGCTAGCAATGATAGCCCT
CAGGAGGTTACGATGATTTCGCCACCCCAAACCGAAGATGGCTTGCCAGA
TTTTCTGGCGCATGAACAGCACAGACAATCAGCACAGATTGTGGAACTGG
ACGAGAGCGTTTCCCCCATCTTAGAGCCTAGTCTACAGCTGGAGCTTAGG
CAGACGCGGAACAGAAACATTCCTCGCTTCTTCGAGTCACTTGAAACAGC
CGAAATGGACTTGACTGTGTTCACAGATAGACTCCACATGTCATGTGTCT
ATCAAGGGTGTTTCGCCCTTTGTGACGAATCCATCAGTATAGACCGGATA
CGGAAGCATTTCTGCCTACTACTTCAGATTATGGACAGGAATCGTATCGC
GTCATATTTTCAAGCCGCGCTCAATGAGAAAGAGAGTCGAAGATATTTTG
AGGAGTGGGAAGAGGTACCCTTCTTCAGTCTGGGGGGCGCAGGAACCCAT
TACTCTCGATCTTCCCTGAAGTGTAAAGCAGCTGATCGTCCATTCCGGCC
TGGAGTGCGGTGGGTTTCCGTGCGATCACTATCGCACTTTCCGCAAGATA
TACAGACCAAGCTTGAAGGGGACTGGTTCGACATGGGTGACCTGGAAGGA
TACCTGCGGGAGCATGATGTACATCTTCTCGCATATCCTCCCATGGATCA
CGCGCGCCATCGCCTCAAGGGAACAGCGATCAATGCAGCACGTTTCATAC
AGGCACTGTCCGCAAATGCAATATGCCTTGGGTGGACGCCGGGGTTCCGT
CGCCGTGACGTGGAGAACGCTCTCCAGACCTGTTCTGATTTTTCATACAC
CTCGGAGGATGCCTCTGGGTCACCGGACATCTCTTTTGCGGGATTTAGCG
AGCGACTCGCAAGACAGACCATTGAAGCATAAATGAATATGAGCGACTCA
GACACGGCTTTAGTCCCCTGGGAGACTGTCAACGATGAGTTTTTTGGATC
TCAGTGTGACTCGACCGCCCCGCAGATAACATCGCTGCTCTCGGCTTGCT
CGTATCCCGTGCCCCAACAGATCAGGAGACAACGAAATGCCCAATTCCCA
CTTCTTGGTGGAATCATACCGGAAAACCAACTGCTTCTTTACAATAACGA
CACCCAACCGGCTGAACCGGCAGTAAAGTCTCTGAAACGCACTCGCAGTG
ACGTAGATAAGCGCGGCTCAACATCACTCACCAAAAGGGGTCGACCGCGA
AAAGTAGTCGATGACACCGCAGATGAAGATCCAGAAGAGAGACGTCGGAG
ACAGATCCGACTTGCGCAACGCGCATATCGTTCACGAAAAGAGGCCAACC
TCTCGTCTTTGAAAGGTCGCATCTCGGAACTCGAAGGCATCGTGGAAAAA
ATGAGCACGGCTGTTTTATCGCTCAGTGACGAGCTGGTTCAGTCAGGAGT
GTTGGCATCACATGCGGGTCTGACAGAGCAATTGCGCGATACCGTACAGA
CATGTCTCACCCTAGCCAGAGAGGCTAGCAATGATAGCCCTCAGGAGGTT
ACGATGATTTCGCCACCCCAAACCGAAGATGGCTTGCCAGATTTTCTGGC
GCATGAACAGCACAGACAATCAGCACAGATTGTGGAACTGGACGAGAGCG
TTTCCCCCATCTTAGAGCCTAGTCTACAGCTGGAGCTTAGGCAGACGCGG
AACAGAAACATTCCTCGCTTCTTCGAGTCACTTGAAACAGCCGAAATGGA
CTTGACTGTGTTCACAGATAGACTCCACATGTCATGTGTCTATCAAGGGT
GTTTCGCCCTTTGTGACGAATCCATCAGTATAGACCGGATACGGAAGCAT
TTCTGCCTACTACTTCAGATTATGGACAGGAATCGTATCGCGTCATATTT
TCAAGCCGCGCTCAATGAGAAAGAGAGTCGAAGATATTTTGAGGAGTGGG
AAGAGGTACCCTTCTTCAGTCTGGGGGGCGCAGGAACCCATTACTCTCGA
TCTTCCCTGAAGTGTAAAGCAGCTGATCGTCCATTCCGGCCTGGAGTGCG
GTGGGTTTCCGTGCGATCACTATCGCACTTTCCGCAAGATATACAGACCA
AGCTTGAAGGGGACTGGTTCGACATGGGTGACCTGGAAGGATACCTGCGG
GAGCATGATGTACATCTTCTCGCATATCCTCCCATGGATCACGCGCGCCA
TCGCCTCAAGGGAACAGCGATCAATGCAGCACGTTTCATACAGGCACTGT
CCGCAAATGCAATATGCCTTGGGTGGACGCCGGGGTTCCGTCGCCGTGAC
GTGGAGAACGCTCTCCAGACCTGTTCTGATTTTTCATACACCTCGGAGGA
TGCCTCTGGGTCACCGGACATCTCTTTTGCGGGATTTAGCGAGCGACTCG
CAAGACAGACCATTGAAGCATAAATGAATATGAGCGACTCAGACACGGCT
TTAGTCCCCTGGGAGACTGTCAACGATGAGTTTTTTGGATCTCAGTGTGA
CTCGACCGCCCCGCAGATAACATCGCTGCTCTCGGCTTGCTCGTATCCCG
TGCCCCAACAGATCAGGAGACAACGAAATGCCCAATTCCCACTTCTTGGT
GGAATCATACCGGAAAACCAACTGCTTCTTTACAATAACGACACCCAACC
GGCTGAACCGGCAGTAAAGTCTCTGAAACGCACTCGCAGTGACGTAGATA
AGCGCGGCTCAACATCACTCACCAAAAGGGGTCGACCGCGAAAAGTAGTC
GATGACACCGCAGATGAAGATCCAGAAGAGAGACGTCGGAGACAGATCCG
ACTTGCGCAACGCGCATATCGTTCACGAAAAGAGGCCAACCTCTCGTCTT
TGAAAGGTCGCATCTCGGAACTCGAAGGCATCGTGGAAAAAATGAGCACG
GCTGTTTTATCGCTCAGTGACGAGCTGGTTCAGTCAGGAGTGTTGGCATC
ACATGCGGGTCTGACAGAGCAATTGCGCGATACCGTACAGACATGTCTCA
CCCTAGCCAGAGAGGCTAGCAATGATAGCCCTCAGGAGGTTACGATGATT
TCGCCACCCCAAACCGAAGATGGCTTGCCAGATTTTCTGGCGCATGAACA
GCACAGACAATCAGCACAGATTGTGGAACTGGACGAGAGCGTTTCCCCCA
TCTTAGAGCCTAGTCTACAGCTGGAGCTTAGGCAGACGCGGAACAGAAAC
ATTCCTCGCTTCTTCGAGTCACTTGAAACAGCCGAAATGGACTTGACTGT
GTTCACAGATAGACTCCACATGTCATGTGTCTATCAAGGGTGTTTCGCCC
TTTGTGACGAATCCATCAGTATAGACCGGATACGGAAGCATTTCTGCCTA
CTACTTCAGATTATGGACAGGAATCGTATCGCGTCATATTTTCAAGCCGC
GCTCAATGAGAAAGAGAGTCGAAGATATTTTGAGGAGTGGGAAGAGGTAC
CCTTCTTCAGTCTGGGGGGCGCAGGAACCCATTACTCTCGATCTTCCCTG
AAGTGTAAAGCAGCTGATCGTCCATTCCGGCCTGGAGTGCGGTGGGTTTC
CGTGCGATCACTATCGCACTTTCCGCAAGATATACAGACCAAGCTTGAAG
GGGACTGGTTCGACATGGGTGACCTGGAAGGATACCTGCGGGAGCATGAT
GTACATCTTCTCGCATATCCTCCCATGGATCACGCGCGCCATCGCCTCAA
GGGAACAGCGATCAATGCAGCACGTTTCATACAGGCACTGTCCGCAAATG
CAATATGCCTTGGGTGGACGCCGGGGTTCCGTCGCCGTGACGTGGAGAAC
GCTCTCCAGACCTGTTCTGATTTTTCATACACCTCGGAGGATGCCTCTGG
GTCACCGGACATCTCTTTTGCGGGATTTAGCGAGCGACTCGCAAGACAGA
CCATTGAAGCATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003979ATCC10864_003979Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003979-T1.exon1ATCC10864_003979-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003979-T1.exon2ATCC10864_003979-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003979-T1.exon3ATCC10864_003979-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_003979-T1.exon4ATCC10864_003979-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003979-T1.cdsATCC10864_003979-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003979-T1ATCC10864_003979-T1-proteinAspergillus niger ATCC 10864polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_1000069.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000069supercontigMCQH01000069:496481..498164 +
Powered by Drupal