You are here

Home

ATCC10864_004003-T1, ATCC10864_004003-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004003-T1
Unique NameATCC10864_004003-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000072:27845..28967-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004003-T1 ID=ATCC10864_004003-T1|Name=ATCC10864_004003-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1123bp|location=Sequence derived from alignment at MCQH01000072:27845..28967- (Aspergillus niger ATCC 10864)
ATGACTGTTGCCGACAAATCAGACGAAGTTTATCCCCCGATCCCCGCATA
CGGTGGTGAGTCGCCCCAGGAATTTAGATGTAATGGTTGAGCAAGCTTAC
ACCACGATTTTACAGGCCGGTGGACTCCGCCAAAGCACCTTCTGGACTGC
TACAACCACATGTGGATTGACACAGACGTGTGGGAGCTTCCAGAAAATGT
TATTTACGAGCTCTACAGCCAACCAACGCGCGGTCCTGGAGCGCAGGGTT
CCTATCTGGTCGTCCTACCACCGGGCTACGATGATCGTGATGTAAACGGC
GAGCGATACCCCGTACTATACTGGCTTCATGGGGGCTTTTCATGCTCGCG
CCATGCGATGTGGTCCCTCCAATTCTATGCACGCAAAATGGAGCTGGGCA
CCATGCCCAAGGTAATTCTGGTGGCACCGCAGGTACGTTTGGAGTGGCGT
AATTGGAGGAAAGAGATTATTGTTATCCATACCCTTGCTGATACCGTTCA
TAGTCATTGCCAAAAGGCCGCTGGATCAACAGCTACGACGGCAGCCGCCG
CCTTGGGGACATCATGCGCCATGATCTCGTCACAGCTATTGATGAGCGGT
ACAGGACCATTAGACATCCATCAGCACGTTGGCTAGAGGGTCACTCAGCG
GGCGGGTAGGTGGCTGAACACCCGTAGAACGTTTCTTTTACTAAAGACAG
TTGACCAGTTATGGTGCCTTCAACCTCGGTCTCAAGTATCCCGATGTTTT
CGGAGGCGCCTTGTCGTCGCTTGCTGGCTCATTCCGAACCGAATTAGCCA
AGGAAGGCCTCGAGGTCACCTACGACACTTACAACGGCTCGCAGGCCTTT
TTCACTTCTAATCATGCTCTCACGCTGCTGAAGGCCATCCTCCCTCGGGT
CCATCGCGACAAGCCGGAGCTGCGGCTGCTCATTGGCGGCGAGGACATTA
GACTACGTGAAGCACACGAGCACATGTGGACCAGCTTGGATGCTCTGGGC
GTGCCATATATGAAAGCTATTGTCCCGGGAGCTCCCCACACCGCAGAGCA
TGTCCTGGGCGGCCTGAACAACGAAGGTCTCCAGTTCTGGTGGAACGCAC
GGGCAAAGGTTATTGAGGCCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000072:27845..28967-

>ATCC10864_004003-T1 ID=ATCC10864_004003-T1|Name=ATCC10864_004003-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3756bp|location=Sequence derived from alignment at MCQH01000072:27845..28967- (Aspergillus niger ATCC 10864)
TTATGGTGCCTTCAACCTCGGTCTCAAGTATCCCGATGTTTTCGGAGGCG
CCTTGTCGTCGCTTGCTGGCTCATTCCGAACCGAATTAGCCAAGGAAGGC
CTCGAGGTCACCTACGACACTTACAACGGCTCGCAGGCCTTTTTCACTTC
TAATCATGCTCTCACGCTGCTGAAGGCCATCCTCCCTCGGGTCCATCGCG
ACAAGCCGGAGCTGCGGCTGCTCATTGGCGGCGAGGACATTAGACTACGT
GAAGCACACGAGCACATGTGGACCAGCTTGGATGCTCTGGGCGTGCCATA
TATGAAAGCTATTGTCCCGGGAGCTCCCCACACCGCAGAGCATGTCCTGG
GCGGCCTGAACAACGAAGGTCTCCAGTTCTGGTGGAACGCACGGGCAAAG
GTTATTGAGGCCTGATCATTGCCAAAAGGCCGCTGGATCAACAGCTACGA
CGGCAGCCGCCGCCTTGGGGACATCATGCGCCATGATCTCGTCACAGCTA
TTGATGAGCGGTACAGGACCATTAGACATCCATCAGCACGTTGGCTAGAG
GGTCACTCAGCGGGCGGGCCGGTGGACTCCGCCAAAGCACCTTCTGGACT
GCTACAACCACATGTGGATTGACACAGACGTGTGGGAGCTTCCAGAAAAT
GTTATTTACGAGCTCTACAGCCAACCAACGCGCGGTCCTGGAGCGCAGGG
TTCCTATCTGGTCGTCCTACCACCGGGCTACGATGATCGTGATGTAAACG
GCGAGCGATACCCCGTACTATACTGGCTTCATGGGGGCTTTTCATGCTCG
CGCCATGCGATGTGGTCCCTCCAATTCTATGCACGCAAAATGGAGCTGGG
CACCATGCCCAAGGTAATTCTGGTGGCACCGCAGATGACTGTTGCCGACA
AATCAGACGAAGTTTATCCCCCGATCCCCGCATACGGTGTTATGGTGCCT
TCAACCTCGGTCTCAAGTATCCCGATGTTTTCGGAGGCGCCTTGTCGTCG
CTTGCTGGCTCATTCCGAACCGAATTAGCCAAGGAAGGCCTCGAGGTCAC
CTACGACACTTACAACGGCTCGCAGGCCTTTTTCACTTCTAATCATGCTC
TCACGCTGCTGAAGGCCATCCTCCCTCGGGTCCATCGCGACAAGCCGGAG
CTGCGGCTGCTCATTGGCGGCGAGGACATTAGACTACGTGAAGCACACGA
GCACATGTGGACCAGCTTGGATGCTCTGGGCGTGCCATATATGAAAGCTA
TTGTCCCGGGAGCTCCCCACACCGCAGAGCATGTCCTGGGCGGCCTGAAC
AACGAAGGTCTCCAGTTCTGGTGGAACGCACGGGCAAAGGTTATTGAGGC
CTGATCATTGCCAAAAGGCCGCTGGATCAACAGCTACGACGGCAGCCGCC
GCCTTGGGGACATCATGCGCCATGATCTCGTCACAGCTATTGATGAGCGG
TACAGGACCATTAGACATCCATCAGCACGTTGGCTAGAGGGTCACTCAGC
GGGCGGGCCGGTGGACTCCGCCAAAGCACCTTCTGGACTGCTACAACCAC
ATGTGGATTGACACAGACGTGTGGGAGCTTCCAGAAAATGTTATTTACGA
GCTCTACAGCCAACCAACGCGCGGTCCTGGAGCGCAGGGTTCCTATCTGG
TCGTCCTACCACCGGGCTACGATGATCGTGATGTAAACGGCGAGCGATAC
CCCGTACTATACTGGCTTCATGGGGGCTTTTCATGCTCGCGCCATGCGAT
GTGGTCCCTCCAATTCTATGCACGCAAAATGGAGCTGGGCACCATGCCCA
AGGTAATTCTGGTGGCACCGCAGATGACTGTTGCCGACAAATCAGACGAA
GTTTATCCCCCGATCCCCGCATACGGTGTTATGGTGCCTTCAACCTCGGT
CTCAAGTATCCCGATGTTTTCGGAGGCGCCTTGTCGTCGCTTGCTGGCTC
ATTCCGAACCGAATTAGCCAAGGAAGGCCTCGAGGTCACCTACGACACTT
ACAACGGCTCGCAGGCCTTTTTCACTTCTAATCATGCTCTCACGCTGCTG
AAGGCCATCCTCCCTCGGGTCCATCGCGACAAGCCGGAGCTGCGGCTGCT
CATTGGCGGCGAGGACATTAGACTACGTGAAGCACACGAGCACATGTGGA
CCAGCTTGGATGCTCTGGGCGTGCCATATATGAAAGCTATTGTCCCGGGA
GCTCCCCACACCGCAGAGCATGTCCTGGGCGGCCTGAACAACGAAGGTCT
CCAGTTCTGGTGGAACGCACGGGCAAAGGTTATTGAGGCCTGATCATTGC
CAAAAGGCCGCTGGATCAACAGCTACGACGGCAGCCGCCGCCTTGGGGAC
ATCATGCGCCATGATCTCGTCACAGCTATTGATGAGCGGTACAGGACCAT
TAGACATCCATCAGCACGTTGGCTAGAGGGTCACTCAGCGGGCGGGCCGG
TGGACTCCGCCAAAGCACCTTCTGGACTGCTACAACCACATGTGGATTGA
CACAGACGTGTGGGAGCTTCCAGAAAATGTTATTTACGAGCTCTACAGCC
AACCAACGCGCGGTCCTGGAGCGCAGGGTTCCTATCTGGTCGTCCTACCA
CCGGGCTACGATGATCGTGATGTAAACGGCGAGCGATACCCCGTACTATA
CTGGCTTCATGGGGGCTTTTCATGCTCGCGCCATGCGATGTGGTCCCTCC
AATTCTATGCACGCAAAATGGAGCTGGGCACCATGCCCAAGGTAATTCTG
GTGGCACCGCAGATGACTGTTGCCGACAAATCAGACGAAGTTTATCCCCC
GATCCCCGCATACGGTGTTATGGTGCCTTCAACCTCGGTCTCAAGTATCC
CGATGTTTTCGGAGGCGCCTTGTCGTCGCTTGCTGGCTCATTCCGAACCG
AATTAGCCAAGGAAGGCCTCGAGGTCACCTACGACACTTACAACGGCTCG
CAGGCCTTTTTCACTTCTAATCATGCTCTCACGCTGCTGAAGGCCATCCT
CCCTCGGGTCCATCGCGACAAGCCGGAGCTGCGGCTGCTCATTGGCGGCG
AGGACATTAGACTACGTGAAGCACACGAGCACATGTGGACCAGCTTGGAT
GCTCTGGGCGTGCCATATATGAAAGCTATTGTCCCGGGAGCTCCCCACAC
CGCAGAGCATGTCCTGGGCGGCCTGAACAACGAAGGTCTCCAGTTCTGGT
GGAACGCACGGGCAAAGGTTATTGAGGCCTGATCATTGCCAAAAGGCCGC
TGGATCAACAGCTACGACGGCAGCCGCCGCCTTGGGGACATCATGCGCCA
TGATCTCGTCACAGCTATTGATGAGCGGTACAGGACCATTAGACATCCAT
CAGCACGTTGGCTAGAGGGTCACTCAGCGGGCGGGCCGGTGGACTCCGCC
AAAGCACCTTCTGGACTGCTACAACCACATGTGGATTGACACAGACGTGT
GGGAGCTTCCAGAAAATGTTATTTACGAGCTCTACAGCCAACCAACGCGC
GGTCCTGGAGCGCAGGGTTCCTATCTGGTCGTCCTACCACCGGGCTACGA
TGATCGTGATGTAAACGGCGAGCGATACCCCGTACTATACTGGCTTCATG
GGGGCTTTTCATGCTCGCGCCATGCGATGTGGTCCCTCCAATTCTATGCA
CGCAAAATGGAGCTGGGCACCATGCCCAAGGTAATTCTGGTGGCACCGCA
GATGACTGTTGCCGACAAATCAGACGAAGTTTATCCCCCGATCCCCGCAT
ACGGTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004003ATCC10864_004003Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004003-T1ATCC10864_004003-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004003-T1.cdsATCC10864_004003-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004003-T1.exon4ATCC10864_004003-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004003-T1.exon3ATCC10864_004003-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004003-T1.exon2ATCC10864_004003-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004003-T1.exon1ATCC10864_004003-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00756
InterProIPR000801
InterProIPR029058
Properties
Property NameValue
NoteCAZy:CE1
NoteMEROPS:MER0061059
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000072supercontigMCQH01000072:27845..28967 -
Powered by Drupal