|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000072:46968..49366- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004012-T1 ID=ATCC10864_004012-T1|Name=ATCC10864_004012-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2399bp|location=Sequence derived from alignment at MCQH01000072:46968..49366- (Aspergillus niger ATCC 10864)
ATGGAGCAGCCGAGCCCGCCATGGTATCCAACCACAGAGGTCCGCCCTTC
TGCAAACGCTCTCTCGAAGACGCACAGCTCAACGACTTCGACTCGGCATA
AACGGCGTCCTGCGGCTTGTGTCCGCTGTCGTCGGCGAAAGGTCCGCTGT
GATGGCGCCGTACCCACATGCTCCAACTGTGCGAAAGCTGGTGTAGACTG
TATGGAAGGGCGAGCTGCATCTGCTGTATCCAGAAGGTAATTGCCTTCCC
CATTGCGAAGGTACCTGCTAAGATAAAATACATTCAATAGCCGATTGTAC
TATCTGGAACGGCGCGTTCGAGAGCTAGAAAGACTAGAAATATCGCCACT
ACGCGACAATTTCGACAATAGCCAAAGCGCCTTTGATCAAAATCAACTGC
TTGGTGGGCACAATGCAAGTCCACCACAAACCTCTGTAGTGGCTGAACAT
CATGGCCTTGACCTGAGTCAAAACCACCACAGCCCTCCCGTACAGTCATC
GGCTGTCCCGAGCTCGACCCAGATCACTCACAACCAACCGCTGGCCCATG
AGGTCGGCCTTCTGTCCCTGGCCAGCAATACAGATCCTAAATATTTAGGC
CCATCATCTGGAGTTTCATTCGCCCAGCTCATCTATGAAAGCGCCCCCCA
GTCACAAGGCTTGCCATTGCCGCTGCTTAGAAGCCAAGGGACACGGCAAG
AGCTGCACGCTCTTCCACCTACAGTAACGGGGCAGGCGCTCACGTCAGAA
GTCTCTAGCATTCCACCCATCCACTTGCCCTCCCCAACAGAGTGCCAGCA
GTACGCAGAGGCTTACTTCGAGAGCACGTGTCTTTATCCTTTCATCTCAC
AGGACAGGCTATATGAGCTCCTAAGCCAAGTCCGGAAGTTTAAAGAGACA
TCTACATGGAATCATCCGGTCCCTATTAGACTAGCTGCGGCGCAGCTAGG
TCTCGTTCTGTCCTTGGGGGCACGGTTCCTTGAATTACGACTCGGGTCCG
AATTTGACTCCCACGACTTTTTTGTCTCTGCCATGACTCACTGCTCCCAG
ATATGCCTTCAGGATAGCGTGGAGGGTGTACAAGTCCTGTTACTGATGGT
TCTTCACAGCTTCTATAGTCCAAAGGGCCTAAATGCTTGGTATCTTCTCC
ACACTATCATTGCAAGCTGTCTAGACCTTGGCCTTCAACGACGGCATGGA
TGTGAGTGGACGCAAAAAGATGGAAGGGCAATAATCTCTAAGACTGTCGT
CTAGATGCTCCAGAGTTGAATTTGACGACATACCCTGTGACCGCACAAAG
ACGTAGCGCCATATTCTGGTCGGCATATTCAATGGATCGGACACTAACAA
CTATTCTCGGTCGTCCATTGACCCTCAGAGATGAGGCCATTGATCAGCCA
TTTCCAGGTCTTGAGGGAAGCGATGAAGTTGACGAAGCAGGAACTCAGTG
GCATCGTGCATGTATTACGTCGGAAATGAACATGCAGCCCTCCGAGCAAA
TACCCTCGACGTATCTAGCATTTATTTACTCCCTACGATTTGACCGAATC
ATTGCTGAGATCAAGCTAATGATTTACCGCGTCTCTCGCTCGCCACGTCG
TTTTCCCTGGCCATCGAATATTCCCGCCTGGCAACGGGAGACAGAACAAG
CTTGCAATAACCTCCTAACCGAAGTCCACAATCAGCAGCGCGGCCGTCCG
CTGTGCGGCCGCAGCTCACTATCTGGAACAACCGTGCAATGCCTGGAGAT
CAAATTCCACCAATGCATCATACTCCTCTACCGACCGAGCCCTCAGTTGC
CATATCCAAGCTTCGATGCCATCAAAACATGTTTTGGTAGCGCAATGAAG
ATAATCCAGATCAACGCGGAGCTTCACCGCTTCTTGAACATGGAGTTGTC
GTGGCTCTCTGCTCACTCTATCTTTGTTGCTGCCATCACAGTGCTGTATT
GCCTCTGGGCTTACCCTACGGTGAGAGGTCTGATGCCGGTAAACGTTCCA
TTATCCCGTGTAGAGTCCGCCTTGGAGCTCCTTACATTCCTTAAACGGCA
ATGGTCTGTAGCAGTGCAGCCATGCGAAAAGCTCTCGCGACTCATTGCCC
TGACTCGCGAAAGTATTTCCGAGACCGCCGAGAACCCAAGGCAATCCGAG
ACTACGGATAACAATATAAGAAATCCGACCGCTGAGACACAGGTTGGGAA
TGGGGCTAGCGCCGTGCCTCAAGAAGACGGCAGGTCGCTGTTGATCGATG
AATTGGGTATCCTGCGCGATCTGTTTGACCTCGGCTGGCTCAGTGACTGG
GGCTCGGATCCTACCCAGCCGCCTGTCTGGGATACCTCGGGGTTTATGAC
GGGCTTTGATGCTCGGCGGGATTCTGGTGCAGCTCGTCGTGGTGGATGA back to topCoding sequence (CDS) from alignment at MCQH01000072:46968..49366- >ATCC10864_004012-T1 ID=ATCC10864_004012-T1|Name=ATCC10864_004012-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6876bp|location=Sequence derived from alignment at MCQH01000072:46968..49366- (Aspergillus niger ATCC 10864)
ATGCTCCAGAGTTGAATTTGACGACATACCCTGTGACCGCACAAAGACGT
AGCGCCATATTCTGGTCGGCATATTCAATGGATCGGACACTAACAACTAT
TCTCGGTCGTCCATTGACCCTCAGAGATGAGGCCATTGATCAGCCATTTC
CAGGTCTTGAGGGAAGCGATGAAGTTGACGAAGCAGGAACTCAGTGGCAT
CGTGCATGTATTACGTCGGAAATGAACATGCAGCCCTCCGAGCAAATACC
CTCGACGTATCTAGCATTTATTTACTCCCTACGATTTGACCGAATCATTG
CTGAGATCAAGCTAATGATTTACCGCGTCTCTCGCTCGCCACGTCGTTTT
CCCTGGCCATCGAATATTCCCGCCTGGCAACGGGAGACAGAACAAGCTTG
CAATAACCTCCTAACCGAAGTCCACAATCAGCAGCGCGGCCGTCCGCTGT
GCGGCCGCAGCTCACTATCTGGAACAACCGTGCAATGCCTGGAGATCAAA
TTCCACCAATGCATCATACTCCTCTACCGACCGAGCCCTCAGTTGCCATA
TCCAAGCTTCGATGCCATCAAAACATGTTTTGGTAGCGCAATGAAGATAA
TCCAGATCAACGCGGAGCTTCACCGCTTCTTGAACATGGAGTTGTCGTGG
CTCTCTGCTCACTCTATCTTTGTTGCTGCCATCACAGTGCTGTATTGCCT
CTGGGCTTACCCTACGGTGAGAGGTCTGATGCCGGTAAACGTTCCATTAT
CCCGTGTAGAGTCCGCCTTGGAGCTCCTTACATTCCTTAAACGGCAATGG
TCTGTAGCAGTGCAGCCATGCGAAAAGCTCTCGCGACTCATTGCCCTGAC
TCGCGAAAGTATTTCCGAGACCGCCGAGAACCCAAGGCAATCCGAGACTA
CGGATAACAATATAAGAAATCCGACCGCTGAGACACAGGTTGGGAATGGG
GCTAGCGCCGTGCCTCAAGAAGACGGCAGGTCGCTGTTGATCGATGAATT
GGGTATCCTGCGCGATCTGTTTGACCTCGGCTGGCTCAGTGACTGGGGCT
CGGATCCTACCCAGCCGCCTGTCTGGGATACCTCGGGGTTTATGACGGGC
TTTGATGCTCGGCGGGATTCTGGTGCAGCTCGTCGTGGTGGATGACCGAT
TGTACTATCTGGAACGGCGCGTTCGAGAGCTAGAAAGACTAGAAATATCG
CCACTACGCGACAATTTCGACAATAGCCAAAGCGCCTTTGATCAAAATCA
ACTGCTTGGTGGGCACAATGCAAGTCCACCACAAACCTCTGTAGTGGCTG
AACATCATGGCCTTGACCTGAGTCAAAACCACCACAGCCCTCCCGTACAG
TCATCGGCTGTCCCGAGCTCGACCCAGATCACTCACAACCAACCGCTGGC
CCATGAGGTCGGCCTTCTGTCCCTGGCCAGCAATACAGATCCTAAATATT
TAGGCCCATCATCTGGAGTTTCATTCGCCCAGCTCATCTATGAAAGCGCC
CCCCAGTCACAAGGCTTGCCATTGCCGCTGCTTAGAAGCCAAGGGACACG
GCAAGAGCTGCACGCTCTTCCACCTACAGTAACGGGGCAGGCGCTCACGT
CAGAAGTCTCTAGCATTCCACCCATCCACTTGCCCTCCCCAACAGAGTGC
CAGCAGTACGCAGAGGCTTACTTCGAGAGCACGTGTCTTTATCCTTTCAT
CTCACAGGACAGGCTATATGAGCTCCTAAGCCAAGTCCGGAAGTTTAAAG
AGACATCTACATGGAATCATCCGGTCCCTATTAGACTAGCTGCGGCGCAG
CTAGGTCTCGTTCTGTCCTTGGGGGCACGGTTCCTTGAATTACGACTCGG
GTCCGAATTTGACTCCCACGACTTTTTTGTCTCTGCCATGACTCACTGCT
CCCAGATATGCCTTCAGGATAGCGTGGAGGGTGTACAAGTCCTGTTACTG
ATGGTTCTTCACAGCTTCTATAGTCCAAAGGGCCTAAATGCTTGGTATCT
TCTCCACACTATCATTGCAAGCTGTCTAGACCTTGGCCTTCAACGACGGC
ATGGATATGGAGCAGCCGAGCCCGCCATGGTATCCAACCACAGAGGTCCG
CCCTTCTGCAAACGCTCTCTCGAAGACGCACAGCTCAACGACTTCGACTC
GGCATAAACGGCGTCCTGCGGCTTGTGTCCGCTGTCGTCGGCGAAAGGTC
CGCTGTGATGGCGCCGTACCCACATGCTCCAACTGTGCGAAAGCTGGTGT
AGACTGTATGGAAGGGCGAGCTGCATCTGCTGTATCCAGAAGATGCTCCA
GAGTTGAATTTGACGACATACCCTGTGACCGCACAAAGACGTAGCGCCAT
ATTCTGGTCGGCATATTCAATGGATCGGACACTAACAACTATTCTCGGTC
GTCCATTGACCCTCAGAGATGAGGCCATTGATCAGCCATTTCCAGGTCTT
GAGGGAAGCGATGAAGTTGACGAAGCAGGAACTCAGTGGCATCGTGCATG
TATTACGTCGGAAATGAACATGCAGCCCTCCGAGCAAATACCCTCGACGT
ATCTAGCATTTATTTACTCCCTACGATTTGACCGAATCATTGCTGAGATC
AAGCTAATGATTTACCGCGTCTCTCGCTCGCCACGTCGTTTTCCCTGGCC
ATCGAATATTCCCGCCTGGCAACGGGAGACAGAACAAGCTTGCAATAACC
TCCTAACCGAAGTCCACAATCAGCAGCGCGGCCGTCCGCTGTGCGGCCGC
AGCTCACTATCTGGAACAACCGTGCAATGCCTGGAGATCAAATTCCACCA
ATGCATCATACTCCTCTACCGACCGAGCCCTCAGTTGCCATATCCAAGCT
TCGATGCCATCAAAACATGTTTTGGTAGCGCAATGAAGATAATCCAGATC
AACGCGGAGCTTCACCGCTTCTTGAACATGGAGTTGTCGTGGCTCTCTGC
TCACTCTATCTTTGTTGCTGCCATCACAGTGCTGTATTGCCTCTGGGCTT
ACCCTACGGTGAGAGGTCTGATGCCGGTAAACGTTCCATTATCCCGTGTA
GAGTCCGCCTTGGAGCTCCTTACATTCCTTAAACGGCAATGGTCTGTAGC
AGTGCAGCCATGCGAAAAGCTCTCGCGACTCATTGCCCTGACTCGCGAAA
GTATTTCCGAGACCGCCGAGAACCCAAGGCAATCCGAGACTACGGATAAC
AATATAAGAAATCCGACCGCTGAGACACAGGTTGGGAATGGGGCTAGCGC
CGTGCCTCAAGAAGACGGCAGGTCGCTGTTGATCGATGAATTGGGTATCC
TGCGCGATCTGTTTGACCTCGGCTGGCTCAGTGACTGGGGCTCGGATCCT
ACCCAGCCGCCTGTCTGGGATACCTCGGGGTTTATGACGGGCTTTGATGC
TCGGCGGGATTCTGGTGCAGCTCGTCGTGGTGGATGACCGATTGTACTAT
CTGGAACGGCGCGTTCGAGAGCTAGAAAGACTAGAAATATCGCCACTACG
CGACAATTTCGACAATAGCCAAAGCGCCTTTGATCAAAATCAACTGCTTG
GTGGGCACAATGCAAGTCCACCACAAACCTCTGTAGTGGCTGAACATCAT
GGCCTTGACCTGAGTCAAAACCACCACAGCCCTCCCGTACAGTCATCGGC
TGTCCCGAGCTCGACCCAGATCACTCACAACCAACCGCTGGCCCATGAGG
TCGGCCTTCTGTCCCTGGCCAGCAATACAGATCCTAAATATTTAGGCCCA
TCATCTGGAGTTTCATTCGCCCAGCTCATCTATGAAAGCGCCCCCCAGTC
ACAAGGCTTGCCATTGCCGCTGCTTAGAAGCCAAGGGACACGGCAAGAGC
TGCACGCTCTTCCACCTACAGTAACGGGGCAGGCGCTCACGTCAGAAGTC
TCTAGCATTCCACCCATCCACTTGCCCTCCCCAACAGAGTGCCAGCAGTA
CGCAGAGGCTTACTTCGAGAGCACGTGTCTTTATCCTTTCATCTCACAGG
ACAGGCTATATGAGCTCCTAAGCCAAGTCCGGAAGTTTAAAGAGACATCT
ACATGGAATCATCCGGTCCCTATTAGACTAGCTGCGGCGCAGCTAGGTCT
CGTTCTGTCCTTGGGGGCACGGTTCCTTGAATTACGACTCGGGTCCGAAT
TTGACTCCCACGACTTTTTTGTCTCTGCCATGACTCACTGCTCCCAGATA
TGCCTTCAGGATAGCGTGGAGGGTGTACAAGTCCTGTTACTGATGGTTCT
TCACAGCTTCTATAGTCCAAAGGGCCTAAATGCTTGGTATCTTCTCCACA
CTATCATTGCAAGCTGTCTAGACCTTGGCCTTCAACGACGGCATGGATAT
GGAGCAGCCGAGCCCGCCATGGTATCCAACCACAGAGGTCCGCCCTTCTG
CAAACGCTCTCTCGAAGACGCACAGCTCAACGACTTCGACTCGGCATAAA
CGGCGTCCTGCGGCTTGTGTCCGCTGTCGTCGGCGAAAGGTCCGCTGTGA
TGGCGCCGTACCCACATGCTCCAACTGTGCGAAAGCTGGTGTAGACTGTA
TGGAAGGGCGAGCTGCATCTGCTGTATCCAGAAGATGCTCCAGAGTTGAA
TTTGACGACATACCCTGTGACCGCACAAAGACGTAGCGCCATATTCTGGT
CGGCATATTCAATGGATCGGACACTAACAACTATTCTCGGTCGTCCATTG
ACCCTCAGAGATGAGGCCATTGATCAGCCATTTCCAGGTCTTGAGGGAAG
CGATGAAGTTGACGAAGCAGGAACTCAGTGGCATCGTGCATGTATTACGT
CGGAAATGAACATGCAGCCCTCCGAGCAAATACCCTCGACGTATCTAGCA
TTTATTTACTCCCTACGATTTGACCGAATCATTGCTGAGATCAAGCTAAT
GATTTACCGCGTCTCTCGCTCGCCACGTCGTTTTCCCTGGCCATCGAATA
TTCCCGCCTGGCAACGGGAGACAGAACAAGCTTGCAATAACCTCCTAACC
GAAGTCCACAATCAGCAGCGCGGCCGTCCGCTGTGCGGCCGCAGCTCACT
ATCTGGAACAACCGTGCAATGCCTGGAGATCAAATTCCACCAATGCATCA
TACTCCTCTACCGACCGAGCCCTCAGTTGCCATATCCAAGCTTCGATGCC
ATCAAAACATGTTTTGGTAGCGCAATGAAGATAATCCAGATCAACGCGGA
GCTTCACCGCTTCTTGAACATGGAGTTGTCGTGGCTCTCTGCTCACTCTA
TCTTTGTTGCTGCCATCACAGTGCTGTATTGCCTCTGGGCTTACCCTACG
GTGAGAGGTCTGATGCCGGTAAACGTTCCATTATCCCGTGTAGAGTCCGC
CTTGGAGCTCCTTACATTCCTTAAACGGCAATGGTCTGTAGCAGTGCAGC
CATGCGAAAAGCTCTCGCGACTCATTGCCCTGACTCGCGAAAGTATTTCC
GAGACCGCCGAGAACCCAAGGCAATCCGAGACTACGGATAACAATATAAG
AAATCCGACCGCTGAGACACAGGTTGGGAATGGGGCTAGCGCCGTGCCTC
AAGAAGACGGCAGGTCGCTGTTGATCGATGAATTGGGTATCCTGCGCGAT
CTGTTTGACCTCGGCTGGCTCAGTGACTGGGGCTCGGATCCTACCCAGCC
GCCTGTCTGGGATACCTCGGGGTTTATGACGGGCTTTGATGCTCGGCGGG
ATTCTGGTGCAGCTCGTCGTGGTGGATGACCGATTGTACTATCTGGAACG
GCGCGTTCGAGAGCTAGAAAGACTAGAAATATCGCCACTACGCGACAATT
TCGACAATAGCCAAAGCGCCTTTGATCAAAATCAACTGCTTGGTGGGCAC
AATGCAAGTCCACCACAAACCTCTGTAGTGGCTGAACATCATGGCCTTGA
CCTGAGTCAAAACCACCACAGCCCTCCCGTACAGTCATCGGCTGTCCCGA
GCTCGACCCAGATCACTCACAACCAACCGCTGGCCCATGAGGTCGGCCTT
CTGTCCCTGGCCAGCAATACAGATCCTAAATATTTAGGCCCATCATCTGG
AGTTTCATTCGCCCAGCTCATCTATGAAAGCGCCCCCCAGTCACAAGGCT
TGCCATTGCCGCTGCTTAGAAGCCAAGGGACACGGCAAGAGCTGCACGCT
CTTCCACCTACAGTAACGGGGCAGGCGCTCACGTCAGAAGTCTCTAGCAT
TCCACCCATCCACTTGCCCTCCCCAACAGAGTGCCAGCAGTACGCAGAGG
CTTACTTCGAGAGCACGTGTCTTTATCCTTTCATCTCACAGGACAGGCTA
TATGAGCTCCTAAGCCAAGTCCGGAAGTTTAAAGAGACATCTACATGGAA
TCATCCGGTCCCTATTAGACTAGCTGCGGCGCAGCTAGGTCTCGTTCTGT
CCTTGGGGGCACGGTTCCTTGAATTACGACTCGGGTCCGAATTTGACTCC
CACGACTTTTTTGTCTCTGCCATGACTCACTGCTCCCAGATATGCCTTCA
GGATAGCGTGGAGGGTGTACAAGTCCTGTTACTGATGGTTCTTCACAGCT
TCTATAGTCCAAAGGGCCTAAATGCTTGGTATCTTCTCCACACTATCATT
GCAAGCTGTCTAGACCTTGGCCTTCAACGACGGCATGGATATGGAGCAGC
CGAGCCCGCCATGGTATCCAACCACAGAGGTCCGCCCTTCTGCAAACGCT
CTCTCGAAGACGCACAGCTCAACGACTTCGACTCGGCATAAACGGCGTCC
TGCGGCTTGTGTCCGCTGTCGTCGGCGAAAGGTCCGCTGTGATGGCGCCG
TACCCACATGCTCCAACTGTGCGAAAGCTGGTGTAGACTGTATGGAAGGG
CGAGCTGCATCTGCTGTATCCAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000072 | supercontig | MCQH01000072:46968..49366 - |
|
