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ATCC10864_004015-T1, ATCC10864_004015-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004015-T1
Unique NameATCC10864_004015-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000072:53211..54432-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004015-T1 ID=ATCC10864_004015-T1|Name=ATCC10864_004015-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1222bp|location=Sequence derived from alignment at MCQH01000072:53211..54432- (Aspergillus niger ATCC 10864)
ATGACTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAA
TACCATGAAAAACGTGAAGACCATATTGGTTACTGGAGGCGCCGGTTTTA
TGTGAGTCTATTACTGTGGCTATGGTTATTGGAGTTTCAAAGACACAGAT
AGGTAAACTAACACTGCTTGGTCAGTGGAGGCTGGTTCGTTCGACACCTC
CTTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTGATATCCTCGA
TTACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACATTTGCCTAACT
TCCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGTGACTGCTCTC
TTCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGGCCAATTCTCA
TGTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGGAGCAACGTCA
CAGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGGGACAGTAATA
AGGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAAACATGCCAGG
CCAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCCACCAATCCGT
ATTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTCCTACCGTTAT
TCCTTTCACATGCCCATCATAATAACCCGCTGCAATAATGTTTTCGGTCC
CTGTCAGTACCCTGAAAGTGAGAGCTCCCTGATGCTGATTTAACGGGCTG
CTGTTCCCTGACATACCTTGTGCTAGAACTCATTCCAAAGTTCGCGATGC
AAATGCTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAGGCAGTT
CGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTTTCGATATCATTCT
TCATCGAGGCCTTGTGTCTGAGACATACAATATATCCTCGAAAGAGCAGA
TAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTGGTTTCATGCAGTC
CAGAGCGATACCTGCGAACAATATCTGGAGACAGTCGCAGATAGACCCTT
CAACGACCGGATGTACTGGACCAATGATTCCAAGCTTCGACAATTAGGAT
GGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAATGACACTAGAATGG
TATCGTGACCATGGCGAAACATTCTGGTCTGGACCAGGGCCAGCGTGTAA
ATTGAACGGGAGGCAGGGTTGA
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Coding sequence (CDS) from alignment at MCQH01000072:53211..54432-

>ATCC10864_004015-T1 ID=ATCC10864_004015-T1|Name=ATCC10864_004015-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3267bp|location=Sequence derived from alignment at MCQH01000072:53211..54432- (Aspergillus niger ATCC 10864)
AACTCATTCCAAAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACT
TTACATGGTCAGGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGATGC
CATGAGCGCTTTCGATATCATTCTTCATCGAGGCCTTGTGTCTGAGACAT
ACAATATATCCTCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGA
ATTATTCAGTGGTTTCATGCAGTCCAGAGCGATACCTGCGAACAATATCT
GGAGACAGTCGCAGATAGACCCTTCAACGACCGGATGTACTGGACCAATG
ATTCCAAGCTTCGACAATTAGGATGGACGGAGAAAGTGTCCTTCGATGAG
GGACTTATAATGACACTAGAATGGTATCGTGACCATGGCGAAACATTCTG
GTCTGGACCAGGGCCAGCGTGTAAATTGAACGGGAGGCAGGGTTGATGGA
GGCTGGTTCGTTCGACACCTCCTTCAGGTATACGGAACGAAATATACGGT
ACTCTGTTTTGATATCCTCGATTACTGCGCATCTAAGCGCAACTTTCAAC
CCGTTGAACATTTGCCTAACTTCCACTTCTTTCCGGGGGATCTGTGCGAC
CGCGACAGAGTGACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCAGTTGT
CCACTTCGCGGCCAATTCTCATGTGGATCAATCTCTAGTTAACCCGCTCT
CTTTCACTCGGAGCAACGTCACAGGGACCCATGTCCTTCTGGAAGCAGCA
CGCCAAGCTGGGACAGTAATAAGGTTTATCCACATCTCTACTGACGAGGT
ATACGGAGGAAACATGCCAGGCCAGGACTATGCCTTTACCGAGGAAGATC
AGCTGAACCCCACCAATCCGTATTCTGCTAGCAAAGCCGCTGCTGAGATG
ATCGCCAATTCCTACCGTTATTCCTTTCACATGCCCATCATAATAACCCG
CTGCAATAATGTTTTCGGTCCCTGTCAGTACCCTGAAAATGACTGTCCAA
CAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAATACCATGAAAAA
CGTGAAGACCATATTGGTTACTGGAGGCGCCGGTTTTATAACTCATTCCA
AAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACTTTACATGGTCA
GGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTT
TCGATATCATTCTTCATCGAGGCCTTGTGTCTGAGACATACAATATATCC
TCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTG
GTTTCATGCAGTCCAGAGCGATACCTGCGAACAATATCTGGAGACAGTCG
CAGATAGACCCTTCAACGACCGGATGTACTGGACCAATGATTCCAAGCTT
CGACAATTAGGATGGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAAT
GACACTAGAATGGTATCGTGACCATGGCGAAACATTCTGGTCTGGACCAG
GGCCAGCGTGTAAATTGAACGGGAGGCAGGGTTGATGGAGGCTGGTTCGT
TCGACACCTCCTTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTG
ATATCCTCGATTACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACAT
TTGCCTAACTTCCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGT
GACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGG
CCAATTCTCATGTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGG
AGCAACGTCACAGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGG
GACAGTAATAAGGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAA
ACATGCCAGGCCAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCC
ACCAATCCGTATTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTC
CTACCGTTATTCCTTTCACATGCCCATCATAATAACCCGCTGCAATAATG
TTTTCGGTCCCTGTCAGTACCCTGAAAATGACTGTCCAACAACCACGACT
TGAAATCAATGGCTCAGACGAGGAGAATACCATGAAAAACGTGAAGACCA
TATTGGTTACTGGAGGCGCCGGTTTTATAACTCATTCCAAAGTTCGCGAT
GCAAATGCTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAGGCAG
TTCGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTTTCGATATCATT
CTTCATCGAGGCCTTGTGTCTGAGACATACAATATATCCTCGAAAGAGCA
GATAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTGGTTTCATGCAG
TCCAGAGCGATACCTGCGAACAATATCTGGAGACAGTCGCAGATAGACCC
TTCAACGACCGGATGTACTGGACCAATGATTCCAAGCTTCGACAATTAGG
ATGGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAATGACACTAGAAT
GGTATCGTGACCATGGCGAAACATTCTGGTCTGGACCAGGGCCAGCGTGT
AAATTGAACGGGAGGCAGGGTTGATGGAGGCTGGTTCGTTCGACACCTCC
TTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTGATATCCTCGAT
TACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACATTTGCCTAACTT
CCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGTGACTGCTCTCT
TCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGGCCAATTCTCAT
GTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGGAGCAACGTCAC
AGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGGGACAGTAATAA
GGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAAACATGCCAGGC
CAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCCACCAATCCGTA
TTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTCCTACCGTTATT
CCTTTCACATGCCCATCATAATAACCCGCTGCAATAATGTTTTCGGTCCC
TGTCAGTACCCTGAAAATGACTGTCCAACAACCACGACTTGAAATCAATG
GCTCAGACGAGGAGAATACCATGAAAAACGTGAAGACCATATTGGTTACT
GGAGGCGCCGGTTTTAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009225nucleotide-sugar metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008460dTDP-glucose 4,6-dehydratase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004015ATCC10864_004015Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004015-T1ATCC10864_004015-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004015-T1.cdsATCC10864_004015-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004015-T1.exon3ATCC10864_004015-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004015-T1.exon2ATCC10864_004015-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004015-T1.exon1ATCC10864_004015-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01370
PFAMPF16363
InterProIPR016040
PFAMPF07993
PFAMPF04321
InterProIPR036291
InterProIPR020904
PFAMPF02719
PFAMPF01073
InterProIPR005888
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000072supercontigMCQH01000072:53211..54432 -
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