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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000072:64887..66770+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004021-T1 ID=ATCC10864_004021-T1|Name=ATCC10864_004021-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1884bp|location=Sequence derived from alignment at MCQH01000072:64887..66770+ (Aspergillus niger ATCC 10864)
ATGTTCACTCGTATTCTCCTTCAGCTGAGCCAGGAGCTGATCGGAGTAAT
CTCCTCGCTTGAGCAGTCTGATGCGATCTCCCCCCGAGGAGAGAACCCTC
CCACTTCACCTCTATCACCTACTCGCGGCCGCCGAGGGACTGCTGGTGAC
GCTGACTTTGTTTCTCCCACCCGCCGCGTCTCTGGCCGTGATGGCTCCGG
GGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAA
GTGGCATCCCCAGTTTGGCGCCACGCACCACGCTGGCTGAACGAACCCAA
GGTCGTTTCACCATGGCTGGCCCAGAAGAGACGCCTCAGCTGCGCTTGGC
CCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACG
AACAGCCCGCCAACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCT
CGTGTCGTCCGACCGGGCATGGTGCCGACCAAGGAGGAGCTGTTGGAAGC
CCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGG
AGGTCGACCCCAATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGAC
CCTCGTAAAATGGCGGCCCAGGTGGAAGATGCCCGCATCCAGCGTGAGAA
CAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAG
GCTCGCGCCTCTCGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCC
TGGGATCTCCCGCCTGAGAATCTCTCGACGGTGCCCGAAGGCGAGACCCC
GGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGC
CCTTGGAGCCCGTCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAG
GACGGGATGATGGACGACCTGCCCAATCTGGAGGAGATCGAGGCCGCCTA
TCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGC
ACAACAACCACACCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCC
CTGGCCGAGTCCCTGGGGGTCTTCGTGCAGCTGTTCGTCGGCTTTTGCGG
CGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCAACACCACCGACT
GGGTCTGGGGGTTTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTG
TCCGGTGCACATCTCAATCCGACCATCACCATTATGCTATGGTTTTACCG
CGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGG
GGGCCTTCATCGCCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATC
CAACACTATCTCCTGACCAACTCCACCACGGGCATCATCACCAGCTTTGT
GACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCG
AATTCCTGGGCACGATGATACTGACTGTGGTGGTCCTGGCGCTGGGTGAC
GATCAAAACGCACCCCCGGGAGCGGGTATGAACTCACTCATCGTGGGTCT
CATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCT
TGAATCCGAGTCGAGACTTTGGGCCCCGACTGGCGTTGCTGGCTCTCGGG
TACGGCTCGTCGCTGTTCACCAATCCGTACTGGTTTTACGGACCATGGGC
CGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGA
TCTTCACGGGTGGTGAGTCGCCGGTCAATTACCCCTGGGAACGGACGCAG
CGGGCGATGCGCAAGAGTCGGATGAAGTGGGGGAAGCGGTTGCACCTGTC
GCGCCGAGACAGGGGAGAGAAGACTGTGCGTTGA back to topCoding sequence (CDS) from alignment at MCQH01000072:64887..66770+ >ATCC10864_004021-T1 ID=ATCC10864_004021-T1|Name=ATCC10864_004021-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1884bp|location=Sequence derived from alignment at MCQH01000072:64887..66770+ (Aspergillus niger ATCC 10864)
ATGTTCACTCGTATTCTCCTTCAGCTGAGCCAGGAGCTGATCGGAGTAAT
CTCCTCGCTTGAGCAGTCTGATGCGATCTCCCCCCGAGGAGAGAACCCTC
CCACTTCACCTCTATCACCTACTCGCGGCCGCCGAGGGACTGCTGGTGAC
GCTGACTTTGTTTCTCCCACCCGCCGCGTCTCTGGCCGTGATGGCTCCGG
GGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAA
GTGGCATCCCCAGTTTGGCGCCACGCACCACGCTGGCTGAACGAACCCAA
GGTCGTTTCACCATGGCTGGCCCAGAAGAGACGCCTCAGCTGCGCTTGGC
CCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACG
AACAGCCCGCCAACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCT
CGTGTCGTCCGACCGGGCATGGTGCCGACCAAGGAGGAGCTGTTGGAAGC
CCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGG
AGGTCGACCCCAATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGAC
CCTCGTAAAATGGCGGCCCAGGTGGAAGATGCCCGCATCCAGCGTGAGAA
CAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAG
GCTCGCGCCTCTCGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCC
TGGGATCTCCCGCCTGAGAATCTCTCGACGGTGCCCGAAGGCGAGACCCC
GGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGC
CCTTGGAGCCCGTCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAG
GACGGGATGATGGACGACCTGCCCAATCTGGAGGAGATCGAGGCCGCCTA
TCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGC
ACAACAACCACACCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCC
CTGGCCGAGTCCCTGGGGGTCTTCGTGCAGCTGTTCGTCGGCTTTTGCGG
CGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCAACACCACCGACT
GGGTCTGGGGGTTTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTG
TCCGGTGCACATCTCAATCCGACCATCACCATTATGCTATGGTTTTACCG
CGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGG
GGGCCTTCATCGCCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATC
CAACACTATCTCCTGACCAACTCCACCACGGGCATCATCACCAGCTTTGT
GACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCG
AATTCCTGGGCACGATGATACTGACTGTGGTGGTCCTGGCGCTGGGTGAC
GATCAAAACGCACCCCCGGGAGCGGGTATGAACTCACTCATCGTGGGTCT
CATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCT
TGAATCCGAGTCGAGACTTTGGGCCCCGACTGGCGTTGCTGGCTCTCGGG
TACGGCTCGTCGCTGTTCACCAATCCGTACTGGTTTTACGGACCATGGGC
CGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGA
TCTTCACGGGTGGTGAGTCGCCGGTCAATTACCCCTGGGAACGGACGCAG
CGGGCGATGCGCAAGAGTCGGATGAAGTGGGGGAAGCGGTTGCACCTGTC
GCGCCGAGACAGGGGAGAGAAGACTGTGCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015267 | channel activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00230 |
| InterPro | IPR000425 |
| InterPro | IPR023271 |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1000072.1 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000072 | supercontig | MCQH01000072:64887..66770 + |
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