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ATCC10864_004128-T1, ATCC10864_004128-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004128-T1
Unique NameATCC10864_004128-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000072:349514..350501-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004128-T1 ID=ATCC10864_004128-T1|Name=ATCC10864_004128-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=988bp|location=Sequence derived from alignment at MCQH01000072:349514..350501- (Aspergillus niger ATCC 10864)
ATGCCGGTACTATCCCATTTTCTATCTTCCTCTCCATGAAACTCTCCAGA
CAAATTGACTAATCCCATTCTAGGCATACCACTCCATCTTCCTCGAGGAT
CGGGATGTCCCCGTAATAGGTACGCCGCACTCTCCCCGCCATACACTTAC
CTAGCTACACCCCATACATCGAGAGCTACCTCCACCATACACTCCAGCCC
ACCTCCGTATCAGCAGTCCAACTAATATCCATTGATAGGAAACTTCCCCA
TCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCG
CTCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTA
CGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCC
GTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACC
TTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCG
GGAGGCTGAGAAGGTATGCTTTGCTTGCCCTTGTCGTGCTGAGTTGTGAG
GGGTTGGTGGTGGCTGTTCGATGTTAGGTGTTGCTTAATGAGGTGAGCGT
GCTAATGGGTACTGTTGCAGGCATTGATCAACGTTGCGCTCGACCACTTC
GCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCCTTTGAGGCGCC
CCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACGTTTATTCTTTTT
CGGCCCTCTTCGACTGAGGTCTGTGTTGGAGAGTGCTGATTTGGCTGTAA
TAGGTACCTTTCGCAAGTGAGGCAGGAGATCGCGGTTCGGTTGCATGCTA
GATTATACCCCGGTGGTGAAGGGCCTTCGAAGGTATGTATTTCTTTCTTT
CTACCCTGCAATTACAGATGGGAGGCTAATTAGGGTGTAGTGGTGGCTTA
GTTTTGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAG
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Coding sequence (CDS) from alignment at MCQH01000072:349514..350501-

>ATCC10864_004128-T1 ID=ATCC10864_004128-T1|Name=ATCC10864_004128-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3402bp|location=Sequence derived from alignment at MCQH01000072:349514..350501- (Aspergillus niger ATCC 10864)
TGGTGGCTTAGTTTTGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGGT
ACCTTTCGCAAGTGAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTA
TACCCCGGTGGTGAAGGGCCTTCGAAGGCATTGATCAACGTTGCGCTCGA
CCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCCTTTG
AGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGAAACTTCCC
CATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCC
CGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCC
TACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTT
CCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTA
CCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATG
CGGGAGGCTGAGAAGGCATACCACTCCATCTTCCTCGAGGATCGGGATGT
CCCCGTAATAGATGCCGTGGTGGCTTAGTTTTGCCAAGAGAAAGTTCATG
GGAAAGAGCTTCTAGGTACCTTTCGCAAGTGAGGCAGGAGATCGCGGTTC
GGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGGCATTG
ATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCCC
TTTGAACCAGGCCTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACGT
TGAGACAGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCCC
CGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTGC
CCGCCGACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTTC
CGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCG
CATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTA
AGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATACCACTCCATCTTC
CTCGAGGATCGGGATGTCCCCGTAATAGATGCCGTGGTGGCTTAGTTTTG
CCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGGTACCTTTCGCAAGTGAG
GCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAG
GGCCTTCGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCC
GGTGACGTGTCCTTCCCTTTGAACCAGGCCTTTGAGGCGCCCCGCGATCG
TCAGGATGCGGAGACGTTGAGACAGAAACTTCCCCATCCTCCCCCTCCGC
ACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCGC
CGACACCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGACG
AGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATC
AATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGA
GTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGG
CATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGATGCC
GTGGTGGCTTAGTTTTGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGG
TACCTTTCGCAAGTGAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATT
ATACCCCGGTGGTGAAGGGCCTTCGAAGGCATTGATCAACGTTGCGCTCG
ACCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCCTTT
GAGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGAAACTTCC
CCATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCC
CCGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATC
CTACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCT
TCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGT
ACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTAT
GCGGGAGGCTGAGAAGGCATACCACTCCATCTTCCTCGAGGATCGGGATG
TCCCCGTAATAGATGCCGTGGTGGCTTAGTTTTGCCAAGAGAAAGTTCAT
GGGAAAGAGCTTCTAGGTACCTTTCGCAAGTGAGGCAGGAGATCGCGGTT
CGGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGGCATT
GATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCC
CTTTGAACCAGGCCTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACG
TTGAGACAGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCC
CCGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTG
CCCGCCGACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTT
CCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATC
GCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTT
AAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATACCACTCCATCTT
CCTCGAGGATCGGGATGTCCCCGTAATAGATGCCGTGGTGGCTTAGTTTT
GCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGGTACCTTTCGCAAGTGA
GGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAA
GGGCCTTCGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCC
CGGTGACGTGTCCTTCCCTTTGAACCAGGCCTTTGAGGCGCCCCGCGATC
GTCAGGATGCGGAGACGTTGAGACAGAAACTTCCCCATCCTCCCCCTCCG
CACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCG
CCGACACCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGAC
GAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAAT
CAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCG
AGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAG
GCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGATGC
CG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005885Arp2/3 protein complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004128ATCC10864_004128Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004128-T1ATCC10864_004128-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004128-T1.cdsATCC10864_004128-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004128-T1.exon6ATCC10864_004128-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_004128-T1.exon5ATCC10864_004128-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004128-T1.exon4ATCC10864_004128-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004128-T1.exon3ATCC10864_004128-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004128-T1.exon2ATCC10864_004128-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004128-T1.exon1ATCC10864_004128-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007204
PFAMPF04062
InterProIPR036753
Properties
Property NameValue
NoteBUSCO:EOG09264S3E
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000072supercontigMCQH01000072:349514..350501 -
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