You are here

Home

ATCC10864_004148-T1, ATCC10864_004148-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004148-T1
Unique NameATCC10864_004148-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000072:392995..394030-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004148-T1 ID=ATCC10864_004148-T1|Name=ATCC10864_004148-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1036bp|location=Sequence derived from alignment at MCQH01000072:392995..394030- (Aspergillus niger ATCC 10864)
ATGGCTCGCGCTGCAATGAGCAAACTCTCCTGGGAGAGTCATGTCCTCCG
CCCCGTGCAAAACGCACCTCCTGCCATCATTCCCACACTAATCTACGGTA
CCGCTTGGAAGAAAGATCAGACCGCCGATTTGGTACACCAGGCGCTCGGA
GCTGGTTTCCGCGCCGTGGACACTGCTGCCCAACCCAAGCATTATCGCGA
GGACTTGGTCGGGGAAGGCATACGCAGGGCCCTCCAGGACGGCTATGTCC
GACGAGAAGATCTTCATGTAAGTGGTCAATCCACGGAAAAACCCAAAATT
AGAAATTCTCCCATGCATTTCATGTCTGCCTGTTGCTAATTCATGTCAGG
TCCAAACCAAATTTACTTCTGTCAATGGCCAGAGTCCAGATAATATGCCG
TATGACCCCAAGGCCTCGGTGACCGATCAGGTCCATGCGTCTATCAAGTC
GTCGCTGCATAATCTCCGGCCGTCGAGCACGGCAGATAGCGTGAATGATG
CATACATTGACATGCTCATCCTGCACTCACCGCTGCCGACGATGTCTCAG
ACATTGGAGGCTTGGTCAGCAGTTGAAAGCTATGTTCCTCACCAGGTCCG
TAACCTGGGTATATCCAATACCACTCTGTCCATCCTGAAAGAGCTGTTTG
CCCAAGCGAAAGTGAAGCCTGCTGTGGTTCAGAACCGATTCTATGCCGAC
ACGCAATACGATGTTCCCTTGAGGGCCTTTTGCCGGGAAAATCAGATCAT
CTACCAGAGCTTTTGGACGCTATCGGCAAACCCTGAATTGATTCGCTCGG
ATGCCGTTCAGCTGCTTGCCCACGAGGCAGACATCTCGCCAGCTGCAGCC
CTTTACTGTCTTGTTCTAGGACTGGGATACACTACGGTGTTGGACGGTAC
GACCAAGCGGCATCATATGGAGGCGGACTTGGCTGCCCTGCAGAAGATCG
AGCGGTTTACAGAGAACCAGCCGGACCTGTGGCAGAGAATACTGAAACGC
TTCCAGCAGTTGACTGGTGACCAGACAGTGGAATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000072:392995..394030-

>ATCC10864_004148-T1 ID=ATCC10864_004148-T1|Name=ATCC10864_004148-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1908bp|location=Sequence derived from alignment at MCQH01000072:392995..394030- (Aspergillus niger ATCC 10864)
GTCCAAACCAAATTTACTTCTGTCAATGGCCAGAGTCCAGATAATATGCC
GTATGACCCCAAGGCCTCGGTGACCGATCAGGTCCATGCGTCTATCAAGT
CGTCGCTGCATAATCTCCGGCCGTCGAGCACGGCAGATAGCGTGAATGAT
GCATACATTGACATGCTCATCCTGCACTCACCGCTGCCGACGATGTCTCA
GACATTGGAGGCTTGGTCAGCAGTTGAAAGCTATGTTCCTCACCAGGTCC
GTAACCTGGGTATATCCAATACCACTCTGTCCATCCTGAAAGAGCTGTTT
GCCCAAGCGAAAGTGAAGCCTGCTGTGGTTCAGAACCGATTCTATGCCGA
CACGCAATACGATGTTCCCTTGAGGGCCTTTTGCCGGGAAAATCAGATCA
TCTACCAGAGCTTTTGGACGCTATCGGCAAACCCTGAATTGATTCGCTCG
GATGCCGTTCAGCTGCTTGCCCACGAGGCAGACATCTCGCCAGCTGCAGC
CCTTTACTGTCTTGTTCTAGGACTGGGATACACTACGGTGTTGGACGGTA
CGACCAAGCGGCATCATATGGAGGCGGACTTGGCTGCCCTGCAGAAGATC
GAGCGGTTTACAGAGAACCAGCCGGACCTGTGGCAGAGAATACTGAAACG
CTTCCAGCAGTTGACTGGTGACCAGACAGTGGAATAGATGGCTCGCGCTG
CAATGAGCAAACTCTCCTGGGAGAGTCATGTCCTCCGCCCCGTGCAAAAC
GCACCTCCTGCCATCATTCCCACACTAATCTACGGTACCGCTTGGAAGAA
AGATCAGACCGCCGATTTGGTACACCAGGCGCTCGGAGCTGGTTTCCGCG
CCGTGGACACTGCTGCCCAACCCAAGCATTATCGCGAGGACTTGGTCGGG
GAAGGCATACGCAGGGCCCTCCAGGACGGCTATGTCCGACGAGAAGATCT
TCATGTCCAAACCAAATTTACTTCTGTCAATGGCCAGAGTCCAGATAATA
TGCCGTATGACCCCAAGGCCTCGGTGACCGATCAGGTCCATGCGTCTATC
AAGTCGTCGCTGCATAATCTCCGGCCGTCGAGCACGGCAGATAGCGTGAA
TGATGCATACATTGACATGCTCATCCTGCACTCACCGCTGCCGACGATGT
CTCAGACATTGGAGGCTTGGTCAGCAGTTGAAAGCTATGTTCCTCACCAG
GTCCGTAACCTGGGTATATCCAATACCACTCTGTCCATCCTGAAAGAGCT
GTTTGCCCAAGCGAAAGTGAAGCCTGCTGTGGTTCAGAACCGATTCTATG
CCGACACGCAATACGATGTTCCCTTGAGGGCCTTTTGCCGGGAAAATCAG
ATCATCTACCAGAGCTTTTGGACGCTATCGGCAAACCCTGAATTGATTCG
CTCGGATGCCGTTCAGCTGCTTGCCCACGAGGCAGACATCTCGCCAGCTG
CAGCCCTTTACTGTCTTGTTCTAGGACTGGGATACACTACGGTGTTGGAC
GGTACGACCAAGCGGCATCATATGGAGGCGGACTTGGCTGCCCTGCAGAA
GATCGAGCGGTTTACAGAGAACCAGCCGGACCTGTGGCAGAGAATACTGA
AACGCTTCCAGCAGTTGACTGGTGACCAGACAGTGGAATAGATGGCTCGC
GCTGCAATGAGCAAACTCTCCTGGGAGAGTCATGTCCTCCGCCCCGTGCA
AAACGCACCTCCTGCCATCATTCCCACACTAATCTACGGTACCGCTTGGA
AGAAAGATCAGACCGCCGATTTGGTACACCAGGCGCTCGGAGCTGGTTTC
CGCGCCGTGGACACTGCTGCCCAACCCAAGCATTATCGCGAGGACTTGGT
CGGGGAAGGCATACGCAGGGCCCTCCAGGACGGCTATGTCCGACGAGAAG
ATCTTCAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0047834D-threo-aldose 1-dehydrogenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004148ATCC10864_004148Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004148-T1ATCC10864_004148-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004148-T1.cdsATCC10864_004148-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004148-T1.exon2ATCC10864_004148-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004148-T1.exon1ATCC10864_004148-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023210
PFAMPF00248
InterProIPR036812
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000072supercontigMCQH01000072:392995..394030 -
Powered by Drupal