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ATCC10864_004238-T1, ATCC10864_004238-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004238-T1
Unique NameATCC10864_004238-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:82504..83729-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004238-T1 ID=ATCC10864_004238-T1|Name=ATCC10864_004238-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1226bp|location=Sequence derived from alignment at MCQH01000073:82504..83729- (Aspergillus niger ATCC 10864)
ATGGTGAGTTCCCCGCTTAGGCGCCGTTATGTACTGAGGTGTATACATGC
TGATACCCGGATGATGACAGTTTCGTTCTGGATACTGGGATGACGATCCC
ATGAACGGAGTCATGGGTGGTTCCATGTTCCGCCATGGAGCTGCTCGTCG
TTTCGATGAATACTACCGCTGCTATCCTGTCGCCATGATGCCCGGCCCGG
AGAGAGAGAACGTGAACCACGGCGGCAAGGTCATCATGCCGCCCAGCGCT
CTTGACAAGCTTACTCGCCTTCATATTACGTATCCGATGCTGTTCGAGCT
TCACAACGGTGCACGGGAAAGGTTGACGCACGCTGGTGTACTAGAGTTCA
TTGCGGAAGAGGGGAAGATCTATCTACCTTTCTGGGTAATGTGCTTCTCA
TGATAGGTACCCTGCAGGATACTGACTAGTTGATCTCCCGCAGCTCATGC
AAACTCTCCTTCTGGAACCCGGTGATCTCGTACAGGTCAAGTCGACCGAT
CTCCCACCCGGCCAATTCATCAAGCTGCAAGCTCAATCTACCTCATTCCT
CGATATAAGTGACCCGAAGGCCGTGCTGGAGAATGCTTTCCGTAACTTCT
CCTGTCTGACCAAGGGAGATGTCTTCACATTTGCATACAACGACCAGGTT
TATGAGATGGCGGTCTTGGAAACCAAGCCATCCACCGACACGAATGCCAT
TTCCGTGCTCGAGACAGATCTAGAAGTGGACTTTGCGCCTCCTGTGGGCT
ATGAGGAGCCTCAACGGCCCAGCGGCACCAGTACTCCTCGTAGTGGAGTA
AGCAACAAGCTGCCCTCTGGTGGGCTGCTTCATCCCCATGGAACCATGGC
ACAGGCGATCAACTACGCTGCTATTGCCCCGGAGTCGACTGATGCTGCGG
CGGGTGCCCGAGCGGTCTCATCGAACTTCCTTAGTGGAGGACAGCGTCTG
AATGCCAAGAAGGGAAGCAAAACATCCACACCAAAACCGTCTACTCCTAC
CCCAGGAACAACGAACCCGCAGCATCCCCCTCCTGTCAGGAAGACCAACG
GCCCGCAACCTCTGCGGTTAGGCCACAACCAGCTATTCTTTGGATATGCA
ATCAAGCCAGTGAAGAAGCGCGACGAGAGCGGACAGGTACTCGAGGACAA
GCCTCGCTTCCAGGGATCTGGTCAAACATTACGAGGAAAGAAGAAAGACG
CAAGTGGCTCGGCAACCCCTACTTAA
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Coding sequence (CDS) from alignment at MCQH01000073:82504..83729-

>ATCC10864_004238-T1 ID=ATCC10864_004238-T1|Name=ATCC10864_004238-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3303bp|location=Sequence derived from alignment at MCQH01000073:82504..83729- (Aspergillus niger ATCC 10864)
CTCATGCAAACTCTCCTTCTGGAACCCGGTGATCTCGTACAGGTCAAGTC
GACCGATCTCCCACCCGGCCAATTCATCAAGCTGCAAGCTCAATCTACCT
CATTCCTCGATATAAGTGACCCGAAGGCCGTGCTGGAGAATGCTTTCCGT
AACTTCTCCTGTCTGACCAAGGGAGATGTCTTCACATTTGCATACAACGA
CCAGGTTTATGAGATGGCGGTCTTGGAAACCAAGCCATCCACCGACACGA
ATGCCATTTCCGTGCTCGAGACAGATCTAGAAGTGGACTTTGCGCCTCCT
GTGGGCTATGAGGAGCCTCAACGGCCCAGCGGCACCAGTACTCCTCGTAG
TGGAGTAAGCAACAAGCTGCCCTCTGGTGGGCTGCTTCATCCCCATGGAA
CCATGGCACAGGCGATCAACTACGCTGCTATTGCCCCGGAGTCGACTGAT
GCTGCGGCGGGTGCCCGAGCGGTCTCATCGAACTTCCTTAGTGGAGGACA
GCGTCTGAATGCCAAGAAGGGAAGCAAAACATCCACACCAAAACCGTCTA
CTCCTACCCCAGGAACAACGAACCCGCAGCATCCCCCTCCTGTCAGGAAG
ACCAACGGCCCGCAACCTCTGCGGTTAGGCCACAACCAGCTATTCTTTGG
ATATGCAATCAAGCCAGTGAAGAAGCGCGACGAGAGCGGACAGGTACTCG
AGGACAAGCCTCGCTTCCAGGGATCTGGTCAAACATTACGAGGAAAGAAG
AAAGACGCAAGTGGCTCGGCAACCCCTACTTAATTTCGTTCTGGATACTG
GGATGACGATCCCATGAACGGAGTCATGGGTGGTTCCATGTTCCGCCATG
GAGCTGCTCGTCGTTTCGATGAATACTACCGCTGCTATCCTGTCGCCATG
ATGCCCGGCCCGGAGAGAGAGAACGTGAACCACGGCGGCAAGGTCATCAT
GCCGCCCAGCGCTCTTGACAAGCTTACTCGCCTTCATATTACGTATCCGA
TGCTGTTCGAGCTTCACAACGGTGCACGGGAAAGGTTGACGCACGCTGGT
GTACTAGAGTTCATTGCGGAAGAGGGGAAGATCTATCTACCTTTCTGGAT
GCTCATGCAAACTCTCCTTCTGGAACCCGGTGATCTCGTACAGGTCAAGT
CGACCGATCTCCCACCCGGCCAATTCATCAAGCTGCAAGCTCAATCTACC
TCATTCCTCGATATAAGTGACCCGAAGGCCGTGCTGGAGAATGCTTTCCG
TAACTTCTCCTGTCTGACCAAGGGAGATGTCTTCACATTTGCATACAACG
ACCAGGTTTATGAGATGGCGGTCTTGGAAACCAAGCCATCCACCGACACG
AATGCCATTTCCGTGCTCGAGACAGATCTAGAAGTGGACTTTGCGCCTCC
TGTGGGCTATGAGGAGCCTCAACGGCCCAGCGGCACCAGTACTCCTCGTA
GTGGAGTAAGCAACAAGCTGCCCTCTGGTGGGCTGCTTCATCCCCATGGA
ACCATGGCACAGGCGATCAACTACGCTGCTATTGCCCCGGAGTCGACTGA
TGCTGCGGCGGGTGCCCGAGCGGTCTCATCGAACTTCCTTAGTGGAGGAC
AGCGTCTGAATGCCAAGAAGGGAAGCAAAACATCCACACCAAAACCGTCT
ACTCCTACCCCAGGAACAACGAACCCGCAGCATCCCCCTCCTGTCAGGAA
GACCAACGGCCCGCAACCTCTGCGGTTAGGCCACAACCAGCTATTCTTTG
GATATGCAATCAAGCCAGTGAAGAAGCGCGACGAGAGCGGACAGGTACTC
GAGGACAAGCCTCGCTTCCAGGGATCTGGTCAAACATTACGAGGAAAGAA
GAAAGACGCAAGTGGCTCGGCAACCCCTACTTAATTTCGTTCTGGATACT
GGGATGACGATCCCATGAACGGAGTCATGGGTGGTTCCATGTTCCGCCAT
GGAGCTGCTCGTCGTTTCGATGAATACTACCGCTGCTATCCTGTCGCCAT
GATGCCCGGCCCGGAGAGAGAGAACGTGAACCACGGCGGCAAGGTCATCA
TGCCGCCCAGCGCTCTTGACAAGCTTACTCGCCTTCATATTACGTATCCG
ATGCTGTTCGAGCTTCACAACGGTGCACGGGAAAGGTTGACGCACGCTGG
TGTACTAGAGTTCATTGCGGAAGAGGGGAAGATCTATCTACCTTTCTGGA
TGCTCATGCAAACTCTCCTTCTGGAACCCGGTGATCTCGTACAGGTCAAG
TCGACCGATCTCCCACCCGGCCAATTCATCAAGCTGCAAGCTCAATCTAC
CTCATTCCTCGATATAAGTGACCCGAAGGCCGTGCTGGAGAATGCTTTCC
GTAACTTCTCCTGTCTGACCAAGGGAGATGTCTTCACATTTGCATACAAC
GACCAGGTTTATGAGATGGCGGTCTTGGAAACCAAGCCATCCACCGACAC
GAATGCCATTTCCGTGCTCGAGACAGATCTAGAAGTGGACTTTGCGCCTC
CTGTGGGCTATGAGGAGCCTCAACGGCCCAGCGGCACCAGTACTCCTCGT
AGTGGAGTAAGCAACAAGCTGCCCTCTGGTGGGCTGCTTCATCCCCATGG
AACCATGGCACAGGCGATCAACTACGCTGCTATTGCCCCGGAGTCGACTG
ATGCTGCGGCGGGTGCCCGAGCGGTCTCATCGAACTTCCTTAGTGGAGGA
CAGCGTCTGAATGCCAAGAAGGGAAGCAAAACATCCACACCAAAACCGTC
TACTCCTACCCCAGGAACAACGAACCCGCAGCATCCCCCTCCTGTCAGGA
AGACCAACGGCCCGCAACCTCTGCGGTTAGGCCACAACCAGCTATTCTTT
GGATATGCAATCAAGCCAGTGAAGAAGCGCGACGAGAGCGGACAGGTACT
CGAGGACAAGCCTCGCTTCCAGGGATCTGGTCAAACATTACGAGGAAAGA
AGAAAGACGCAAGTGGCTCGGCAACCCCTACTTAATTTCGTTCTGGATAC
TGGGATGACGATCCCATGAACGGAGTCATGGGTGGTTCCATGTTCCGCCA
TGGAGCTGCTCGTCGTTTCGATGAATACTACCGCTGCTATCCTGTCGCCA
TGATGCCCGGCCCGGAGAGAGAGAACGTGAACCACGGCGGCAAGGTCATC
ATGCCGCCCAGCGCTCTTGACAAGCTTACTCGCCTTCATATTACGTATCC
GATGCTGTTCGAGCTTCACAACGGTGCACGGGAAAGGTTGACGCACGCTG
GTGTACTAGAGTTCATTGCGGAAGAGGGGAAGATCTATCTACCTTTCTGG
ATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004238ATCC10864_004238Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004238-T1ATCC10864_004238-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004238-T1.cdsATCC10864_004238-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004238-T1.exon3ATCC10864_004238-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004238-T1.exon2ATCC10864_004238-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004238-T1.exon1ATCC10864_004238-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03152
InterProIPR004854
InterProIPR042299
Properties
Property NameValue
NoteBUSCO:EOG09263WLB
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:82504..83729 -
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