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ATCC10864_004239-T1, ATCC10864_004239-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004239-T1
Unique NameATCC10864_004239-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:84110..85465+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004239-T1 ID=ATCC10864_004239-T1|Name=ATCC10864_004239-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1356bp|location=Sequence derived from alignment at MCQH01000073:84110..85465+ (Aspergillus niger ATCC 10864)
ATGTCCGCCTCTCAGCCACGCCCCAAGCGAGCGGGTGAAGACTTCACCCG
CACCCACCACCACGAAGATGACGATGTGAACGGTGCCTCCAGCAAGAAAC
CCCGCTTTGACTTACGAAATCCCTCCGCTCTTGCCCCTGATGCGCTGGAA
GACGATGCAGTTCTGGATGCAGACGAAATAGGACGCCGTGGGCAACAAGT
TCGCCGCAAAGCTGTCAACCTTGATGGTTACGACTCGGACAGTGAAAATG
AAGGATTTTCGGCGCGCATCGAGGCCAAGTCGAAAGCAAGCAAAGAAAAG
CACGATGCGGAAGATGACGATATGTTTGCCGAGCTGCAGGAGGATTTTGG
TGCAGAAGAGGTCGACGCCGATGAGGCCTTGCGCAAGAACAAGAAAACGG
TGCGATTCCTACGAGACGATGAAATCGAGGGTCAAGTCGCTTCATCCAAA
AGCGGAGGAACTGTACATGCAGATTTCAGCAAAGGCGCCGACGAGGTTGA
CAATGATGAAGACGAGAGCGAAAGCGAGGTTGGAGATGAGGAGCGCGCAA
AACTCGATGAGGAAATGGATGAAGAGCTTGGCGCTGGCGCAAAGAAAAAG
CATGCGCCAGTACTGGACGCGTTCAACATGCGCACCGAACAAGAGGAGGG
CAGATTCGACGACCAAGGCAACTACATCAGGAAAGCAGCAGACCCGGATG
CGGTCTATGACAGCTGGCTAGAAGGCGTGTCAAAGAAGGATATCCGTCGC
GCCAAAGAGGCCGCAGAGAAGCGAGAGGAGGAGAGAAAAGAAAAGGATAG
GCAAGATGACAGTGTATTGACATCAGACGCCCTGAAGACCATTATCTCAA
ACCTCCATCGAGGCGAGACGATCTTGGAGGCGCTGGCAAGGATTGGCAAG
GGAGCTCCAAAGAAAGCGAAATGGCAGACGAATCGCAACAAAAACCGGAA
GAAGCAAGAATCTGCGAACGAGGATACCGAAATGGCCGAAGAGGATCCCA
AGGAAACGGCTAGAAAGCAAGCGATTGATGCCATCACAGGCGCAGCCGAT
ATTCTTATGACAAGAGGGCAGGCGGATATTTACGACACTGAACGCGAGAT
GCTCACTAGGCAATACCGCCGCGAAACCGGAGAGGACTGGGTCGATCCGT
CGCCCGAGGTCTCAGGGCCCAGTGAAGAAGCTCCTGCAATGTGGGAGTTT
CGTTGGGCGGACGCTCGTGACGGAGGCGTCACACATGGTCCATATGATAG
TGCGACGATGGAGTCGTGGAAGAATGCGGGCTACTTCGGCGAAGGTGTCG
AGTTCCGAAGGACGACAGACACGGGTCCGTGGCAGAGAGAAGCAACATTT
GCATAA
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Coding sequence (CDS) from alignment at MCQH01000073:84110..85465+

>ATCC10864_004239-T1 ID=ATCC10864_004239-T1|Name=ATCC10864_004239-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1356bp|location=Sequence derived from alignment at MCQH01000073:84110..85465+ (Aspergillus niger ATCC 10864)
ATGTCCGCCTCTCAGCCACGCCCCAAGCGAGCGGGTGAAGACTTCACCCG
CACCCACCACCACGAAGATGACGATGTGAACGGTGCCTCCAGCAAGAAAC
CCCGCTTTGACTTACGAAATCCCTCCGCTCTTGCCCCTGATGCGCTGGAA
GACGATGCAGTTCTGGATGCAGACGAAATAGGACGCCGTGGGCAACAAGT
TCGCCGCAAAGCTGTCAACCTTGATGGTTACGACTCGGACAGTGAAAATG
AAGGATTTTCGGCGCGCATCGAGGCCAAGTCGAAAGCAAGCAAAGAAAAG
CACGATGCGGAAGATGACGATATGTTTGCCGAGCTGCAGGAGGATTTTGG
TGCAGAAGAGGTCGACGCCGATGAGGCCTTGCGCAAGAACAAGAAAACGG
TGCGATTCCTACGAGACGATGAAATCGAGGGTCAAGTCGCTTCATCCAAA
AGCGGAGGAACTGTACATGCAGATTTCAGCAAAGGCGCCGACGAGGTTGA
CAATGATGAAGACGAGAGCGAAAGCGAGGTTGGAGATGAGGAGCGCGCAA
AACTCGATGAGGAAATGGATGAAGAGCTTGGCGCTGGCGCAAAGAAAAAG
CATGCGCCAGTACTGGACGCGTTCAACATGCGCACCGAACAAGAGGAGGG
CAGATTCGACGACCAAGGCAACTACATCAGGAAAGCAGCAGACCCGGATG
CGGTCTATGACAGCTGGCTAGAAGGCGTGTCAAAGAAGGATATCCGTCGC
GCCAAAGAGGCCGCAGAGAAGCGAGAGGAGGAGAGAAAAGAAAAGGATAG
GCAAGATGACAGTGTATTGACATCAGACGCCCTGAAGACCATTATCTCAA
ACCTCCATCGAGGCGAGACGATCTTGGAGGCGCTGGCAAGGATTGGCAAG
GGAGCTCCAAAGAAAGCGAAATGGCAGACGAATCGCAACAAAAACCGGAA
GAAGCAAGAATCTGCGAACGAGGATACCGAAATGGCCGAAGAGGATCCCA
AGGAAACGGCTAGAAAGCAAGCGATTGATGCCATCACAGGCGCAGCCGAT
ATTCTTATGACAAGAGGGCAGGCGGATATTTACGACACTGAACGCGAGAT
GCTCACTAGGCAATACCGCCGCGAAACCGGAGAGGACTGGGTCGATCCGT
CGCCCGAGGTCTCAGGGCCCAGTGAAGAAGCTCCTGCAATGTGGGAGTTT
CGTTGGGCGGACGCTCGTGACGGAGGCGTCACACATGGTCCATATGATAG
TGCGACGATGGAGTCGTGGAAGAATGCGGGCTACTTCGGCGAAGGTGTCG
AGTTCCGAAGGACGACAGACACGGGTCCGTGGCAGAGAGAAGCAACATTT
GCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005682U5 snRNP
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004239ATCC10864_004239Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004239-T1.exon1ATCC10864_004239-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004239-T1.cdsATCC10864_004239-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004239-T1ATCC10864_004239-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR039905
InterProIPR035445
PFAMPF02213
InterProIPR003169
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:84110..85465 +
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