You are here

Home

ATCC10864_004260-T1, ATCC10864_004260-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004260-T1
Unique NameATCC10864_004260-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:138232..139239+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004260-T1 ID=ATCC10864_004260-T1|Name=ATCC10864_004260-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1008bp|location=Sequence derived from alignment at MCQH01000073:138232..139239+ (Aspergillus niger ATCC 10864)
ATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAACGTT
GGTTGGCGCCTCTACTCCTAGTTCCCACCATTTCAGTAACTCATTCTTTG
TATTAGAACCCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGA
GTATCTCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTA
AAGCAGTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCT
TATTGCTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGT
CGGCATTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCC
TTCAATGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAG
TCGGACCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGT
TTACCCAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAG
GTTTGTCACGATGCTTTTTACACTCATGATGCATTCTTCAGGAGCTAACA
ACTTCGTCCCCAGGGTCGGATACCTGATATAACTCTATCATGTATCCAAT
ATCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAGGTTGAGAAG
CCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGACATCGTGTT
CTACTCGAAGAGCTGGGCTCAAGTAAGGGTTACTTGGGCAATCTACATCG
TGTATCTCTCTGACCACTGACTTGCAGGGCAACGGATACCAAACTGCTGA
AGAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGTATGGTCCTT
GCTGTATCCTACACGTTGAATCTATGAGTGCTGATTTTACCAGGTCGTTG
CTGTGCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGAC
ACAGAGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCA
TCGAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000073:138232..139239+

>ATCC10864_004260-T1 ID=ATCC10864_004260-T1|Name=ATCC10864_004260-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3885bp|location=Sequence derived from alignment at MCQH01000073:138232..139239+ (Aspergillus niger ATCC 10864)
ATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAACAAC
CCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAGTATCTCCC
ATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAAAGCAGTTG
ACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTTATTGCTGT
CCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTCGGCATTCA
AACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCTTCAATGAG
CCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGTCGGACCAT
TGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTTTACCCAGA
TTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGGGTCGGATA
CCTGATATAACTCTATCATGTATCCAATATCTCCGTCAACAGTACCCATC
CGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGGTCTGCAAA
ACCTCGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCTGGGCTCAA
GGCAACGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAATCCACACT
AACACGAAAAGCGTCGTTGCTGTGCTGCACTTGGGGTCAAGGAGGTGCAG
TGGCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTGCATACTCT
GCAGCAAACTTTCGAGTCATCGAGTAAATGTCATTGGTCGCAATAGGTGC
ATGCTATCTGGATACAATCCTAACAACCCCCCACTACCCAGGAGAAGATG
AGAAGCTACGGGCTTCGAGTATCTCCCATCGACGGGGAGGTAATTGCCCA
AACTCTCTGGAAGTTCTAAAGCAGTTGACAACGAACAGTCCGTCAACTGC
CAATGTCTCCCTGAACCTTATTGCTGTCCTACCTGCGAAGACATCTACTG
CTTCCCAGGAGATCCAGTCGGCATTCAAACCGCACGTTAACCTATCTCAT
TGTATCTTTCGAGAGGCCTTCAATGAGCCCGCCTCAAGCTACATCATTAA
AAGCGAATCGTCTGGCAGTCGGACCATTGTCAACTACAATGAACTGCCTG
AGATCACGGTAGACGAGTTTACCCAGATTGCAGGCAATCTCACCAACCCA
TCCTGGTTCCACTTTGAGGGTCGGATACCTGATATAACTCTATCATGTAT
CCAATATCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAGGTTG
AGAAGCCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGACATC
GTGTTCTACTCGAAGAGCTGGGCTCAAGGCAACGGATACCAAACTGCTGA
AGAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGTCGTTGCTGT
GCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGACACAG
AGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCATCGA
GTAAATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAA
CAACCCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAGTATC
TCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAAAGCA
GTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTTATTG
CTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTCGGCA
TTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCTTCAA
TGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGTCGGA
CCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTTTACC
CAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGGGTCG
GATACCTGATATAACTCTATCATGTATCCAATATCTCCGTCAACAGTACC
CATCCGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGGTCTG
CAAAACCTCGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCTGGGC
TCAAGGCAACGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAATCCA
CACTAACACGAAAAGCGTCGTTGCTGTGCTGCACTTGGGGTCAAGGAGGT
GCAGTGGCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTGCATA
CTCTGCAGCAAACTTTCGAGTCATCGAGTAAATGTCATTGGTCGCAATAG
GTGCATGCTATCTGGATACAATCCTAACAACCCCCCACTACCCAGGAGAA
GATGAGAAGCTACGGGCTTCGAGTATCTCCCATCGACGGGGAGGTAATTG
CCCAAACTCTCTGGAAGTTCTAAAGCAGTTGACAACGAACAGTCCGTCAA
CTGCCAATGTCTCCCTGAACCTTATTGCTGTCCTACCTGCGAAGACATCT
ACTGCTTCCCAGGAGATCCAGTCGGCATTCAAACCGCACGTTAACCTATC
TCATTGTATCTTTCGAGAGGCCTTCAATGAGCCCGCCTCAAGCTACATCA
TTAAAAGCGAATCGTCTGGCAGTCGGACCATTGTCAACTACAATGAACTG
CCTGAGATCACGGTAGACGAGTTTACCCAGATTGCAGGCAATCTCACCAA
CCCATCCTGGTTCCACTTTGAGGGTCGGATACCTGATATAACTCTATCAT
GTATCCAATATCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAG
GTTGAGAAGCCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGA
CATCGTGTTCTACTCGAAGAGCTGGGCTCAAGGCAACGGATACCAAACTG
CTGAAGAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGTCGTTG
CTGTGCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGAC
ACAGAGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCA
TCGAGTAAATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATC
CTAACAACCCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAG
TATCTCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAA
AGCAGTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTT
ATTGCTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTC
GGCATTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCT
TCAATGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGT
CGGACCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTT
TACCCAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGG
GTCGGATACCTGATATAACTCTATCATGTATCCAATATCTCCGTCAACAG
TACCCATCCGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGG
TCTGCAAAACCTCGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCT
GGGCTCAAGGCAACGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAA
TCCACACTAACACGAAAAGCGTCGTTGCTGTGCTGCACTTGGGGTCAAGG
AGGTGCAGTGGCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTG
CATACTCTGCAGCAAACTTTCGAGTCATCGAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004260ATCC10864_004260Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004260-T1ATCC10864_004260-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004260-T1.exon1ATCC10864_004260-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004260-T1.exon2ATCC10864_004260-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004260-T1.exon3ATCC10864_004260-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004260-T1.exon4ATCC10864_004260-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004260-T1.exon5ATCC10864_004260-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004260-T1.cdsATCC10864_004260-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00294
InterProIPR011611
InterProIPR029056
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:138232..139239 +
Powered by Drupal