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ATCC10864_004335-T1, ATCC10864_004335-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004335-T1
Unique NameATCC10864_004335-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:349649..351331+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004335-T1 ID=ATCC10864_004335-T1|Name=ATCC10864_004335-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1683bp|location=Sequence derived from alignment at MCQH01000073:349649..351331+ (Aspergillus niger ATCC 10864)
ATGTCGACGACCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCT
CTCCGCCGAGGAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGC
GCTTACAACAAGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACA
GCCAGCGTAATCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGC
AGACCTCCAGCTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCA
GTCTCGCCACGGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACC
ATCGGCCCTCGATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATT
GATGCTCGGACAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGC
GAGCCTTCCAAGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCC
ATCGTCACCCAGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTC
CTGCATAGGCCTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAG
GCGGCATCCTGATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCC
GGGGGAATCACTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAA
GAGCCCTGTCCAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGA
TCGACTGGGTGGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGC
TACTTGCTCGCGTGAGTATCCCCTAAAACCTCAAAAGCCAACACTCTACC
CCAATCTAACCCATATACCCCAACACAGCATCCTCAGCGCAAACCCCTCC
CGCATCCGCTCCGCAGAAAGCATCATCATCCTCTGCGTCGCCGCCATCGC
CCTCCCCACCTTCATCACCTGGGTGCACTTCCAAGTAAAGCGCGGCAAAC
CAGCATTAATCCCCAACGCACTATGGAAAAACACCTCTTTCTCGAGCATC
TGCGCCACAGTGGCCCTCTCCAACGCCGTAATCAACTCCATGGAACTCTT
CGCCAGTCTATTGTACGTTCCCCCACCCCCTACCCCACACACCCATTCCC
CAAAACCCACTAACAAATCTACCCTCAAACCAGCTTCCAAGAAATCCAAT
CCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCTAATCGTC
GGAGTCCTAATCAACCTCGTAATCGGCTTCTTCGTGCACCGCATCCCCGC
CTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCCCCGCTCC
TCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGCCTTCGTC
GCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGGTGGGGTT
GATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTGGCGGGAG
CGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCATGGCGGTG
TTGCAGGTGATTTCGACGGTGGTGAGTGAGGAGAGGGAAAAGGGTGGGGA
GGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTTTGGACTA
TGTTTGGGTTGATGGTGGTCTGTACGGCGGTTGGGTTTTGGGGGTTGAGG
AGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAG
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Coding sequence (CDS) from alignment at MCQH01000073:349649..351331+

>ATCC10864_004335-T1 ID=ATCC10864_004335-T1|Name=ATCC10864_004335-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4635bp|location=Sequence derived from alignment at MCQH01000073:349649..351331+ (Aspergillus niger ATCC 10864)
ATGTCGACGACCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCT
CTCCGCCGAGGAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGC
GCTTACAACAAGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACA
GCCAGCGTAATCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGC
AGACCTCCAGCTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCA
GTCTCGCCACGGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACC
ATCGGCCCTCGATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATT
GATGCTCGGACAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGC
GAGCCTTCCAAGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCC
ATCGTCACCCAGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTC
CTGCATAGGCCTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAG
GCGGCATCCTGATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCC
GGGGGAATCACTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAA
GAGCCCTGTCCAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGA
TCGACTGGGTGGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGC
TACTTGCTCGCCATCCTCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGA
AAGCATCATCATCCTCTGCGTCGCCGCCATCGCCCTCCCCACCTTCATCA
CCTGGGTGCACTTCCAAGTAAAGCGCGGCAAACCAGCATTAATCCCCAAC
GCACTATGGAAAAACACCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCT
CTCCAACGCCGTAATCAACTCCATGGAACTCTTCGCCAGTCTATTCTTCC
AAGAAATCCAATCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCC
AGCCTAATCGTCGGAGTCCTAATCAACCTCGTAATCGGCTTCTTCGTGCA
CCGCATCCCCGCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCC
TCTCCCCGCTCCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCG
AATGCCTTCGTCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTT
CACGGTGGGGTTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGG
CGTTGGCGGGAGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTG
GGCATGGCGGTGTTGCAGGTGATTTCGACGGTGGTGAGTGAGGAGAGGGA
AAAGGGTGGGGAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGA
GTTTTTGGACTATGTTTGGGTTGATGGTGGTCTGTACGGCGGTTGGGTTT
TGGGGGTTGAGGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAGATGTC
GACGACCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCTCTCCG
CCGAGGAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGCGCTTA
CAACAAGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACAGCCAG
CGTAATCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGCAGACC
TCCAGCTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCAGTCTC
GCCACGGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACCATCGG
CCCTCGATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATTGATGC
TCGGACAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGCGAGCC
TTCCAAGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCCATCGT
CACCCAGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTCCTGCA
TAGGCCTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAGGCGGC
ATCCTGATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCCGGGGG
AATCACTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAAGAGCC
CTGTCCAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGATCGAC
TGGGTGGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGCTACTT
GCTCGCCATCCTCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGAAAGCA
TCATCATCCTCTGCGTCGCCGCCATCGCCCTCCCCACCTTCATCACCTGG
GTGCACTTCCAAGTAAAGCGCGGCAAACCAGCATTAATCCCCAACGCACT
ATGGAAAAACACCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCTCTCCA
ACGCCGTAATCAACTCCATGGAACTCTTCGCCAGTCTATTCTTCCAAGAA
ATCCAATCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCT
AATCGTCGGAGTCCTAATCAACCTCGTAATCGGCTTCTTCGTGCACCGCA
TCCCCGCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCC
CCGCTCCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGC
CTTCGTCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGG
TGGGGTTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTG
GCGGGAGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCAT
GGCGGTGTTGCAGGTGATTTCGACGGTGGTGAGTGAGGAGAGGGAAAAGG
GTGGGGAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTT
TGGACTATGTTTGGGTTGATGGTGGTCTGTACGGCGGTTGGGTTTTGGGG
GTTGAGGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAGATGTCGACGA
CCACCACTGCTGTCACCAGTGAGGTCGGCTCACTACGCCTCTCCGCCGAG
GAAGTCCGACTTCCAGCTCCTCGCGATGACCGAAAGTCGCGCTTACAACA
AGTCGTCGTGATCACCCAGCTGTTTGCCGTCACTCTCACAGCCAGCGTAA
TCAATGGCTTGGTGGTAGTCGGACTCCCCACCATCACTGCAGACCTCCAG
CTGCCTCCTTCGCTTTCCCTCTGGCCCTCCTCGGTATGCAGTCTCGCCAC
GGCCTCTACACTTCTTCTATCCGGCTCAATTGCCGACACCATCGGCCCTC
GATGGGTGGAACTGGTGGGATCTCTCGCCAGCGGTGCATTGATGCTCGGA
CAGGGCCTATCGCAAACTGGCATTGAGCTGGTCATCATGCGAGCCTTCCA
AGGTGTGGGCCTCTCAATGCACCTTGCATCATCGGTGTCCATCGTCACCC
AGCTTTTACCTCCTGGAAAAGGCCGTAACCTGGCATTCTCCTGCATAGGC
CTGAGCCAGCCATTGGGCTTCTCACTGGGTCTAGTAGTAGGCGGCATCCT
GATCGACACTATCGGCTGGCGCGCAGGCTGGTACATCGCCGGGGGAATCA
CTCTCTTCTTCACCGTCATCGGACTGTGGTCGTTACCCAAGAGCCCTGTC
CAGCGAGACGGACACATCCTCCGCAATGTGCGGACTAAGATCGACTGGGT
GGGAGCTGGACTAGCATCAGCATTCATGGCCTTGCTCTGCTACTTGCTCG
CCATCCTCAGCGCAAACCCCTCCCGCATCCGCTCCGCAGAAAGCATCATC
ATCCTCTGCGTCGCCGCCATCGCCCTCCCCACCTTCATCACCTGGGTGCA
CTTCCAAGTAAAGCGCGGCAAACCAGCATTAATCCCCAACGCACTATGGA
AAAACACCTCTTTCTCGAGCATCTGCGCCACAGTGGCCCTCTCCAACGCC
GTAATCAACTCCATGGAACTCTTCGCCAGTCTATTCTTCCAAGAAATCCA
ATCCCTCAGCGCCCTCGGCGCCTCCATCCGCATCCTCCCCAGCCTAATCG
TCGGAGTCCTAATCAACCTCGTAATCGGCTTCTTCGTGCACCGCATCCCC
GCCTACTGGATCGTAACCATCACCTCCTTCTTCTGCGCCCTCTCCCCGCT
CCTCATGGCCGTCATCGACCCAACCCAGACATACTGGGCGAATGCCTTCG
TCGCGCAGCTCCTGCAGCCTATCAGCGCGGACGCGCTCTTCACGGTGGGG
TTGATCGTCATCACGAATGTGTTTCCGGATGATACGCAGGCGTTGGCGGG
AGCGGTGTTTAATACCTCGGCGCAGTTTGGGAGTGCGTTGGGCATGGCGG
TGTTGCAGGTGATTTCGACGGTGGTGAGTGAGGAGAGGGAAAAGGGTGGG
GAGGGAGAGAAGAAGGCGTTGATGGAGGGATATCGGGCGAGTTTTTGGAC
TATGTTTGGGTTGATGGTGGTCTGTACGGCGGTTGGGTTTTGGGGGTTGA
GGAGGTCTGGGAGGGTGGGGTTGAAGAGGGATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004335ATCC10864_004335Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004335-T1.exon1ATCC10864_004335-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004335-T1.exon2ATCC10864_004335-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004335-T1.exon3ATCC10864_004335-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004335-T1.cdsATCC10864_004335-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004335-T1ATCC10864_004335-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
NoteantiSMASH:Cluster_1000073.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:349649..351331 +
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