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ATCC10864_004341-T1, ATCC10864_004341-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004341-T1
Unique NameATCC10864_004341-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:374863..375808+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004341-T1 ID=ATCC10864_004341-T1|Name=ATCC10864_004341-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=946bp|location=Sequence derived from alignment at MCQH01000073:374863..375808+ (Aspergillus niger ATCC 10864)
ATGGCGGAGTATTGGAAATCAGCGGTAGGCAGAAACGTTCTCTCTCATCT
CCCGTGTCTCAGCACTGACTCCGACACAGCCCAAGTTTTGGTGCAAGCAA
TGCAAGATCTTCATTCGCGATACCGCCTTCGAAAAGTCTCAACATGAGGC
TACAGCCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCACC
GGAACAATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTT
GAGCGACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGA
TGCTGCGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGC
GACCTGTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAG
ATGGGTATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGG
AGAATGGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAA
AAGCCAGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGAT
GAGGAGGAAGAAGAGGCGAAACAGGAAGCCGAACGGTTCGTTAGTAAGGG
CTGGGGCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACC
TCGATGCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCTGCA
GCTCCTGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTC
CGTCAAGGGTCAGTTCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTC
CGGAGACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCC
TCCGAGGCGGCTCCTGTGACAAAGGAGGAACTGGAAGATGCCCCAGCTAC
TGGGGTTGTCTTTAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAA
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Coding sequence (CDS) from alignment at MCQH01000073:374863..375808+

>ATCC10864_004341-T1 ID=ATCC10864_004341-T1|Name=ATCC10864_004341-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1782bp|location=Sequence derived from alignment at MCQH01000073:374863..375808+ (Aspergillus niger ATCC 10864)
ATGGCGGAGTATTGGAAATCAGCGCCCAAGTTTTGGTGCAAGCAATGCAA
GATCTTCATTCGCGATACCGCCTTCGAAAAGTCTCAACATGAGGCTACAG
CCAAGCATCAGGGTAATCTAAAGCGCTTCCTTCGTGACATCCACCGGAAC
AATGAGCAGCAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCG
ACTTCGCCAGACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTG
CGCCCTGGAAACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCT
GTTTCTCTGGAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGG
TATCGCTATTCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAAT
GGCAGACACTGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCC
AGTCAATCACTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGA
GGAAGAAGAGGCGAAACAGGAAGCCGAACGGTTCGTTAGTAAGGGCTGGG
GCTCCCGGACACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGAT
GCTCTTTTGGAGTCGACGAAAGATATTAAAAAGGGTAAATCTGCAGCTCC
TGCGGAATCGGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTCCGTCA
AGGGTCAGTTCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTCCGGAG
ACCGGTGAGCCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCCTCCGA
GGCGGCTCCTGTGACAAAGGAGGAACTGGAAGATGCCCCAGCTACTGGGG
TTGTCTTTAAAAAGCGCAAGGCTAAGGTTATGAGAAAGTAAATGGCGGAG
TATTGGAAATCAGCGCCCAAGTTTTGGTGCAAGCAATGCAAGATCTTCAT
TCGCGATACCGCCTTCGAAAAGTCTCAACATGAGGCTACAGCCAAGCATC
AGGGTAATCTAAAGCGCTTCCTTCGTGACATCCACCGGAACAATGAGCAG
CAACAGCGCGAAGCACAGAGAGCGAAAAATGAGGTTGAGCGACTTCGCCA
GACCGTAGCCGGGTCTGCGGGTGGAAAAGACGGGGATGCTGCGCCCTGGA
AACGTGCGCCCGCCCCGGCGCCCAAACCTCAGGAGCGACCTGTTTCTCTG
GAAGAGAGAAAGCGACAAATGGCACAATTAGCGGAGATGGGTATCGCTAT
TCCGGAAGAATACCGCAGTGAGATGGCCCTGGCCGGAGAATGGCAGACAC
TGTCGGAGAAAGTCGTACAACCTTCGGAGGAATCAAAAGCCAGTCAATCA
CTAGGGGTACGCAAACGAAAGCATGAAGAGCGGGATGAGGAGGAAGAAGA
GGCGAAACAGGAAGCCGAACGGTTCGTTAGTAAGGGCTGGGGCTCCCGGA
CACGAGTGTATCCGGGTGCCCAAGAGGACACTGACCTCGATGCTCTTTTG
GAGTCGACGAAAGATATTAAAAAGGGTAAATCTGCAGCTCCTGCGGAATC
GGCGCCGGAGCCAGAGCCTGAGAAGGCGTCGGATTCCGTCAAGGGTCAGT
TCCTGCCGGTCAAGTCGGAAGGGGATGCAGCAGCTCCGGAGACCGGTGAG
CCGTCTCAAGTCAAACAGGAGAGCGAGACTGCCCCCTCCGAGGCGGCTCC
TGTGACAAAGGAGGAACTGGAAGATGCCCCAGCTACTGGGGTTGTCTTTA
AAAAGCGCAAGGCTAAGGTTATGAGAAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004341ATCC10864_004341Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004341-T1.exon1ATCC10864_004341-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004341-T1.exon2ATCC10864_004341-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004341-T1.cdsATCC10864_004341-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004341-T1ATCC10864_004341-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF06220
InterProIPR040023
InterProIPR036236
InterProIPR013085
InterProIPR003604
Properties
Property NameValue
NoteantiSMASH:Cluster_1000073.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:374863..375808 +
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