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ATCC10864_004370-T1, ATCC10864_004370-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004370-T1
Unique NameATCC10864_004370-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:443396..445158+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004370-T1 ID=ATCC10864_004370-T1|Name=ATCC10864_004370-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1763bp|location=Sequence derived from alignment at MCQH01000073:443396..445158+ (Aspergillus niger ATCC 10864)
ATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGTGGTCCTCGA
AGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACAAGGGCCGTC
GCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAGGGTGCTGTG
ACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGGCATCAAAGT
GCAATTCATTGGCACGATCGGTATGGAACAATGGCTCTCATGAGGGGGCG
GGCACACCTCATCACCATCCCCACTGCACAGTTGCTCTAAAACTTCAAGT
CTCGATGCTGACACACAATTGTTACGATTAGAAATGTTCTATGACCGCGG
TAACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAG
AACTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAG
CAATACGAATCATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCG
CGTGACAGTGTCCAGGCGCATGGCGGACGTAATTCGGGAAAAGGACCTCT
GGGTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATG
GACGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATC
CAAGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCG
TGCGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACG
ACTGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTT
CGAGGTAAGACTGAATCCAACTTAAATCGCCGTATGACGTCCGAAGCACT
AACATGCTGCGCGCAGATCATGGATGGATCACCTTCCCGAGGTAAGTCGA
TGGCTCGGACTCACCTGGCTCTCAGACACCGCAACATGTCACACCTGCGG
CATTGTCACAGCCGAACACCTCTACTGACCTGTTTCTAGGTGAAACCATC
CCCATCCGTCTGTTCCTAGGAGGATTCGACCTTACCCCGACATTCCGCGA
CGTGAACAAGAAGTATTCGACACGCTACTACCTCAGCTTGGTGCTTATCG
ACGAAGGTACGTGATGCTGCATCCATTTGCGTTTCATCTGCGTTTTAGCC
TTGTTTTGCGACTGCCGTTCATGAATCCCGTCTGGCGTGGGAGCACCACA
TCGGCCATCCCACGCATGTGAGACCAGGCCTTGGGTTGCAAAGGCGTGGT
GGCTAGCTAGCCGGCCCACTTCCTCCATACCATCATCCCACGGCATCCCA
CCACCCAGGTCAATAGCCGGTCGGCTATTGAAACCCTTAATCGGGCCGAA
AACCTGCAATCTGGCCAGTGGCCACAGTTGGGGTGTTTCTCCCCGTGACT
AACCCCCACGCTAAACCTCAAACTATTCTGGTCTCGCGTGGTGGCCCCAC
CGGCCCCAGTTCCCTCCCGTTTTCGCTGCCTTCCGGAAGTTTCGATCGTC
ACATTCGAACCCCCATCTTGCTAACCCGGGCCTATACAGACGCTCGCCGT
TACTTCAAGCAATCCGAAATTGTCCTCTACCGTCAAGCTCCCGAGATCGC
CACCACCCCTCAAATCGCCCAGCAGCAACAGATCCAACAACAGCAGCTCC
TCCAACAGCAGCAGCAACAGCAACAGCTGCCTGCCGGTTCGGCGACAGCC
GGCCCCGGACGGACTGACACCCAGCCTCAGTTCACTCAGCAAATCTCTGC
TCAGGCGGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000073:443396..445158+

>ATCC10864_004370-T1 ID=ATCC10864_004370-T1|Name=ATCC10864_004370-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5295bp|location=Sequence derived from alignment at MCQH01000073:443396..445158+ (Aspergillus niger ATCC 10864)
ATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGTGGTCCTCGA
AGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACAAGGGCCGTC
GCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAGGGTGCTGTG
ACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGGCATCAAAGT
GCAATTCATTGGCACGATCGAAATGTTCTATGACCGCGGTAACCACTACG
AATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAGAACTGCAGCAC
CCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAGCAATACGAATC
ATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCGCGTGACAGTGT
CCAGGCGCATGGCGGACGTAATTCGGGAAAAGGACCTCTGGGTCTACTCC
TACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATGGACGTTGGTAT
CGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATCCAAGTACCACC
TCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCGTGCGCTTGAAG
ATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACGACTGGATCTCC
GCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTTCGAGATCATGG
ATGGATCACCTTCCCGAGGTGAAACCATCCCCATCCGTCTGTTCCTAGGA
GGATTCGACCTTACCCCGACATTCCGCGACGTGAACAAGAAGTATTCGAC
ACGCTACTACCTCAGCTTGGTGCTTATCGACGAAGACGCTCGCCGTTACT
TCAAGCAATCCGAAATTGTCCTCTACCGTCAAGCTCCCGAGATCGCCACC
ACCCCTCAAATCGCCCAGCAGCAACAGATCCAACAACAGCAGCTCCTCCA
ACAGCAGCAGCAACAGCAACAGCTGCCTGCCGGTTCGGCGACAGCCGGCC
CCGGACGGACTGACACCCAGCCTCAGTTCACTCAGCAAATCTCTGCTCAG
GCGGCTTGAATGACCTCCCTCTTCTTCTCCACGCCCGTCGACATCGATGT
GGTCCTCGAAGACAGCGATGAGCGTCAGACGGTTGATGTCAAGCTCGACA
AGGGCCGTCGCGAGAGGGTCCCCCTCTACATGGACGGAGAGTCTGTCAAG
GGTGCTGTGACGGTCAGACCTAAGGATGGAAAGCGTTTGGAACACACGGG
CATCAAAGTGCAATTCATTGGCACGATCGAAATGTTCTATGACCGCGGTA
ACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCTCCCGGAGAA
CTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATATCGAGAAGCA
ATACGAATCATACAACGGTATCAATGTTAAGCTACGATACTTTGTCCGCG
TGACAGTGTCCAGGCGCATGGCGGACGTAATTCGGGAAAAGGACCTCTGG
GTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCATCAAGATGGA
CGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACTCCAAATCCA
AGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTCCTCCTCGTG
CGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCGTGAGACGAC
TGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCGTGCGCTTCG
AGATCATGGATGGATCACCTTCCCGAGGTGAAACCATCCCCATCCGTCTG
TTCCTAGGAGGATTCGACCTTACCCCGACATTCCGCGACGTGAACAAGAA
GTATTCGACACGCTACTACCTCAGCTTGGTGCTTATCGACGAAGACGCTC
GCCGTTACTTCAAGCAATCCGAAATTGTCCTCTACCGTCAAGCTCCCGAG
ATCGCCACCACCCCTCAAATCGCCCAGCAGCAACAGATCCAACAACAGCA
GCTCCTCCAACAGCAGCAGCAACAGCAACAGCTGCCTGCCGGTTCGGCGA
CAGCCGGCCCCGGACGGACTGACACCCAGCCTCAGTTCACTCAGCAAATC
TCTGCTCAGGCGGCTTGAATGACCTCCCTCTTCTTCTCCACGCCCGTCGA
CATCGATGTGGTCCTCGAAGACAGCGATGAGCGTCAGACGGTTGATGTCA
AGCTCGACAAGGGCCGTCGCGAGAGGGTCCCCCTCTACATGGACGGAGAG
TCTGTCAAGGGTGCTGTGACGGTCAGACCTAAGGATGGAAAGCGTTTGGA
ACACACGGGCATCAAAGTGCAATTCATTGGCACGATCGAAATGTTCTATG
ACCGCGGTAACCACTACGAATTCCTGTCGCTGGTACAGGAGCTCGCAGCT
CCCGGAGAACTGCAGCACCCCCAGACCTTCCCGTTCAACTTCAAGAATAT
CGAGAAGCAATACGAATCATACAACGGTATCAATGTTAAGCTACGATACT
TTGTCCGCGTGACAGTGTCCAGGCGCATGGCGGACGTAATTCGGGAAAAG
GACCTCTGGGTCTACTCCTACCGCATGCCCCCGGAGACCAACAGCCCCAT
CAAGATGGACGTTGGTATCGAAGATTGCCTGCACATTGAGTTCGAATACT
CCAAATCCAAGTACCACCTCAAGGATGTCATCGTGGGACGCATCTACTTC
CTCCTCGTGCGCTTGAAGATCAAACACATGGAGCTATCCATCATCCGTCG
TGAGACGACTGGATCTCCGCCAAACCAGTACAACGAAAGTGAGACGCTCG
TGCGCTTCGAGATCATGGATGGATCACCTTCCCGAGGTGAAACCATCCCC
ATCCGTCTGTTCCTAGGAGGATTCGACCTTACCCCGACATTCCGCGACGT
GAACAAGAAGTATTCGACACGCTACTACCTCAGCTTGGTGCTTATCGACG
AAGACGCTCGCCGTTACTTCAAGCAATCCGAAATTGTCCTCTACCGTCAA
GCTCCCGAGATCGCCACCACCCCTCAAATCGCCCAGCAGCAACAGATCCA
ACAACAGCAGCTCCTCCAACAGCAGCAGCAACAGCAACAGCTGCCTGCCG
GTTCGGCGACAGCCGGCCCCGGACGGACTGACACCCAGCCTCAGTTCACT
CAGCAAATCTCTGCTCAGGCGGCTTGAATGACCTCCCTCTTCTTCTCCAC
GCCCGTCGACATCGATGTGGTCCTCGAAGACAGCGATGAGCGTCAGACGG
TTGATGTCAAGCTCGACAAGGGCCGTCGCGAGAGGGTCCCCCTCTACATG
GACGGAGAGTCTGTCAAGGGTGCTGTGACGGTCAGACCTAAGGATGGAAA
GCGTTTGGAACACACGGGCATCAAAGTGCAATTCATTGGCACGATCGAAA
TGTTCTATGACCGCGGTAACCACTACGAATTCCTGTCGCTGGTACAGGAG
CTCGCAGCTCCCGGAGAACTGCAGCACCCCCAGACCTTCCCGTTCAACTT
CAAGAATATCGAGAAGCAATACGAATCATACAACGGTATCAATGTTAAGC
TACGATACTTTGTCCGCGTGACAGTGTCCAGGCGCATGGCGGACGTAATT
CGGGAAAAGGACCTCTGGGTCTACTCCTACCGCATGCCCCCGGAGACCAA
CAGCCCCATCAAGATGGACGTTGGTATCGAAGATTGCCTGCACATTGAGT
TCGAATACTCCAAATCCAAGTACCACCTCAAGGATGTCATCGTGGGACGC
ATCTACTTCCTCCTCGTGCGCTTGAAGATCAAACACATGGAGCTATCCAT
CATCCGTCGTGAGACGACTGGATCTCCGCCAAACCAGTACAACGAAAGTG
AGACGCTCGTGCGCTTCGAGATCATGGATGGATCACCTTCCCGAGGTGAA
ACCATCCCCATCCGTCTGTTCCTAGGAGGATTCGACCTTACCCCGACATT
CCGCGACGTGAACAAGAAGTATTCGACACGCTACTACCTCAGCTTGGTGC
TTATCGACGAAGACGCTCGCCGTTACTTCAAGCAATCCGAAATTGTCCTC
TACCGTCAAGCTCCCGAGATCGCCACCACCCCTCAAATCGCCCAGCAGCA
ACAGATCCAACAACAGCAGCTCCTCCAACAGCAGCAGCAACAGCAACAGC
TGCCTGCCGGTTCGGCGACAGCCGGCCCCGGACGGACTGACACCCAGCCT
CAGTTCACTCAGCAAATCTCTGCTCAGGCGGCTTGAATGACCTCCCTCTT
CTTCTCCACGCCCGTCGACATCGATGTGGTCCTCGAAGACAGCGATGAGC
GTCAGACGGTTGATGTCAAGCTCGACAAGGGCCGTCGCGAGAGGGTCCCC
CTCTACATGGACGGAGAGTCTGTCAAGGGTGCTGTGACGGTCAGACCTAA
GGATGGAAAGCGTTTGGAACACACGGGCATCAAAGTGCAATTCATTGGCA
CGATCGAAATGTTCTATGACCGCGGTAACCACTACGAATTCCTGTCGCTG
GTACAGGAGCTCGCAGCTCCCGGAGAACTGCAGCACCCCCAGACCTTCCC
GTTCAACTTCAAGAATATCGAGAAGCAATACGAATCATACAACGGTATCA
ATGTTAAGCTACGATACTTTGTCCGCGTGACAGTGTCCAGGCGCATGGCG
GACGTAATTCGGGAAAAGGACCTCTGGGTCTACTCCTACCGCATGCCCCC
GGAGACCAACAGCCCCATCAAGATGGACGTTGGTATCGAAGATTGCCTGC
ACATTGAGTTCGAATACTCCAAATCCAAGTACCACCTCAAGGATGTCATC
GTGGGACGCATCTACTTCCTCCTCGTGCGCTTGAAGATCAAACACATGGA
GCTATCCATCATCCGTCGTGAGACGACTGGATCTCCGCCAAACCAGTACA
ACGAAAGTGAGACGCTCGTGCGCTTCGAGATCATGGATGGATCACCTTCC
CGAGGTGAAACCATCCCCATCCGTCTGTTCCTAGGAGGATTCGACCTTAC
CCCGACATTCCGCGACGTGAACAAGAAGTATTCGACACGCTACTACCTCA
GCTTGGTGCTTATCGACGAAGACGCTCGCCGTTACTTCAAGCAATCCGAA
ATTGTCCTCTACCGTCAAGCTCCCGAGATCGCCACCACCCCTCAAATCGC
CCAGCAGCAACAGATCCAACAACAGCAGCTCCTCCAACAGCAGCAGCAAC
AGCAACAGCTGCCTGCCGGTTCGGCGACAGCCGGCCCCGGACGGACTGAC
ACCCAGCCTCAGTTCACTCAGCAAATCTCTGCTCAGGCGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VPS26ATCC10864_004370Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004370-T1ATCC10864_004370-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004370-T1.exon1ATCC10864_004370-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004370-T1.exon2ATCC10864_004370-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004370-T1.exon3ATCC10864_004370-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004370-T1.exon4ATCC10864_004370-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004370-T1.exon5ATCC10864_004370-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004370-T1.cdsATCC10864_004370-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR028934
InterProIPR014752
PFAMPF03643
Properties
Property NameValue
NoteBUSCO:EOG092632FC
ProductVacuolar protein sorting-associated protein 26
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:443396..445158 +
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