You are here

Home

ATCC10864_004378-T1, ATCC10864_004378-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004378-T1
Unique NameATCC10864_004378-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:461591..463152-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004378-T1 ID=ATCC10864_004378-T1|Name=ATCC10864_004378-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1562bp|location=Sequence derived from alignment at MCQH01000073:461591..463152- (Aspergillus niger ATCC 10864)
ATGTGCGTTAAAAATGGTTAGTTAGCCTTGAACTACCAGGAAGTTTGTAT
ACCAGCCCTTGATGCTACTTGCACATCACATAGATGTCAGCCTTCTATGT
AAGTAGGTGTGGTTGATACGGCAAGTTTCCAAACTGCTAGTGACCATGGA
GCTGGGAACCGAGGCACCGAGGATCACAAGCAGCTAGCCGTCTCATCCAT
CAACCAAGTCTCCTTATCTATCTGCACAGCAACCAAAGCCTTGAATTCCG
ACTCAAAATACCCCCGGCGACGATCAAATTCTCTTCCCTCCTAGCTATAA
AGCACGGACGCATATTTAGTCCCCGTTGCTCCTAGGAACGGACCCAGTCA
CTTCACGACTAACCACCAATCCCAACCCTCACTTTCCAACCCCAGTCACT
TACCCCAGATATCCATCCATCTTACCCAGCAACCCTTGGAAATGACCTCA
GATCATCACCAATCATGCCCCTTCTGCGCCATCGCTCACAAATACCCGCC
CCTCCCACCAACGACATTCTTCCGCCCGAAGAATTCCAGCCACGATGATC
ATCTAAATTTAGCGGCTGCGGCGGCGCCCACTACTGACATTCCTTCCCCG
GAATCATTCGCCGAGCTGAGCAATCCAGGCTCTGGCGATGCACACCTCAT
CTTGTCCACTAGACATGTTCTTGCGTTTTTGGATATTATGCCTTTGACGA
AGGGACATGTTTTGGTTGCGACGAGGGAGCATTGTGAGAGGTTGGGGGAT
GTAAGGGTCGGTGTGGGGAGGGAGGTACGTTGTCAACAGTTTTTAGCTTT
AGTTTAAGTTGTTCTGGGCTTGTGTCTTACTTTGCTTAATTGGAATTGAA
TTGAGTTGCTATGTTGTGTGTCAGTTATAATTTGGGTTTGTCGGATTATG
GCAGGCAGTGTCTTGGTGAAATACTCTGAGTACTGATTGACGGATGGAAA
TCCCAGATCGGCCAATGGCTCCCCATCATCTCGCGAGTTGTGATGCGAAC
GCTTTTCGGAGAGGAAGAGCAAGGGGACTTTGACTCGTTGTGGAATTGGA
ATGTGGTGCAGAATAATGGTGAGTTTTCGGTTGCTAAGCACTTACTACCA
TTTATCTATCTATCTCTGTCTATCTACACATGCTATGCTTGTGTAACCTC
GACGGGCGGCGGTTTAGTTTGTTGATCTTATAGCTTGTGGAATTCACATA
TCCGCATGCCTATTGCCGATGTTTGAGATGAGGCGTTTGAATCATTTACT
TGATTCGGTATTTGGTTGCTAATGGATCGGAATTGAATAGGCGCCAGGGC
GGCGCAGCAGGTCCCTCATGTTCACTTTCATGTTATTCCGAGGCCGCCTG
ATCGGCCGGCGGAAAGGAAGGGAAAGGCTCATTTGAGTTACGTGATGTTT
GGGCGTGGGCAGAGGGAGGATCTAGATGATGAGGAGGGGGAGAGTCTGGC
TAGGCTGTTGAGGGAGGAGTTGGCGAGGGAAGTTCAGAGGGTTAAGAGGG
AGGAGGGTGTGGATTTGGAAGGGGAGTTTGGGGGATTTGGGGTTGGAAAG
GGGAAGCTTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000073:461591..463152-

>ATCC10864_004378-T1 ID=ATCC10864_004378-T1|Name=ATCC10864_004378-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4230bp|location=Sequence derived from alignment at MCQH01000073:461591..463152- (Aspergillus niger ATCC 10864)
GCGCCAGGGCGGCGCAGCAGGTCCCTCATGTTCACTTTCATGTTATTCCG
AGGCCGCCTGATCGGCCGGCGGAAAGGAAGGGAAAGGCTCATTTGAGTTA
CGTGATGTTTGGGCGTGGGCAGAGGGAGGATCTAGATGATGAGGAGGGGG
AGAGTCTGGCTAGGCTGTTGAGGGAGGAGTTGGCGAGGGAAGTTCAGAGG
GTTAAGAGGGAGGAGGGTGTGGATTTGGAAGGGGAGTTTGGGGGATTTGG
GGTTGGAAAGGGGAAGCTTTGAATCGGCCAATGGCTCCCCATCATCTCGC
GAGTTGTGATGCGAACGCTTTTCGGAGAGGAAGAGCAAGGGGACTTTGAC
TCGTTGTGGAATTGGAATGTGGTGCAGAATAATGCAACCCTTGGAAATGA
CCTCAGATCATCACCAATCATGCCCCTTCTGCGCCATCGCTCACAAATAC
CCGCCCCTCCCACCAACGACATTCTTCCGCCCGAAGAATTCCAGCCACGA
TGATCATCTAAATTTAGCGGCTGCGGCGGCGCCCACTACTGACATTCCTT
CCCCGGAATCATTCGCCGAGCTGAGCAATCCAGGCTCTGGCGATGCACAC
CTCATCTTGTCCACTAGACATGTTCTTGCGTTTTTGGATATTATGCCTTT
GACGAAGGGACATGTTTTGGTTGCGACGAGGGAGCATTGTGAGAGGTTGG
GGGATGTAAGGGTCGGTGTGGGGAGGGAGGTGTGGTTGATACGGCAAGTT
TCCAAACTGCTAGTGACCATGGAGCTGGGAACCGAGGCACCGAGGATCAC
AAGCAGCTAGCCGTCTCATCCATCAACCAAATGTGCGTTAAAAATGGCGC
CAGGGCGGCGCAGCAGGTCCCTCATGTTCACTTTCATGTTATTCCGAGGC
CGCCTGATCGGCCGGCGGAAAGGAAGGGAAAGGCTCATTTGAGTTACGTG
ATGTTTGGGCGTGGGCAGAGGGAGGATCTAGATGATGAGGAGGGGGAGAG
TCTGGCTAGGCTGTTGAGGGAGGAGTTGGCGAGGGAAGTTCAGAGGGTTA
AGAGGGAGGAGGGTGTGGATTTGGAAGGGGAGTTTGGGGGATTTGGGGTT
GGAAAGGGGAAGCTTTGAATCGGCCAATGGCTCCCCATCATCTCGCGAGT
TGTGATGCGAACGCTTTTCGGAGAGGAAGAGCAAGGGGACTTTGACTCGT
TGTGGAATTGGAATGTGGTGCAGAATAATGCAACCCTTGGAAATGACCTC
AGATCATCACCAATCATGCCCCTTCTGCGCCATCGCTCACAAATACCCGC
CCCTCCCACCAACGACATTCTTCCGCCCGAAGAATTCCAGCCACGATGAT
CATCTAAATTTAGCGGCTGCGGCGGCGCCCACTACTGACATTCCTTCCCC
GGAATCATTCGCCGAGCTGAGCAATCCAGGCTCTGGCGATGCACACCTCA
TCTTGTCCACTAGACATGTTCTTGCGTTTTTGGATATTATGCCTTTGACG
AAGGGACATGTTTTGGTTGCGACGAGGGAGCATTGTGAGAGGTTGGGGGA
TGTAAGGGTCGGTGTGGGGAGGGAGGTGTGGTTGATACGGCAAGTTTCCA
AACTGCTAGTGACCATGGAGCTGGGAACCGAGGCACCGAGGATCACAAGC
AGCTAGCCGTCTCATCCATCAACCAAATGTGCGTTAAAAATGGCGCCAGG
GCGGCGCAGCAGGTCCCTCATGTTCACTTTCATGTTATTCCGAGGCCGCC
TGATCGGCCGGCGGAAAGGAAGGGAAAGGCTCATTTGAGTTACGTGATGT
TTGGGCGTGGGCAGAGGGAGGATCTAGATGATGAGGAGGGGGAGAGTCTG
GCTAGGCTGTTGAGGGAGGAGTTGGCGAGGGAAGTTCAGAGGGTTAAGAG
GGAGGAGGGTGTGGATTTGGAAGGGGAGTTTGGGGGATTTGGGGTTGGAA
AGGGGAAGCTTTGAATCGGCCAATGGCTCCCCATCATCTCGCGAGTTGTG
ATGCGAACGCTTTTCGGAGAGGAAGAGCAAGGGGACTTTGACTCGTTGTG
GAATTGGAATGTGGTGCAGAATAATGCAACCCTTGGAAATGACCTCAGAT
CATCACCAATCATGCCCCTTCTGCGCCATCGCTCACAAATACCCGCCCCT
CCCACCAACGACATTCTTCCGCCCGAAGAATTCCAGCCACGATGATCATC
TAAATTTAGCGGCTGCGGCGGCGCCCACTACTGACATTCCTTCCCCGGAA
TCATTCGCCGAGCTGAGCAATCCAGGCTCTGGCGATGCACACCTCATCTT
GTCCACTAGACATGTTCTTGCGTTTTTGGATATTATGCCTTTGACGAAGG
GACATGTTTTGGTTGCGACGAGGGAGCATTGTGAGAGGTTGGGGGATGTA
AGGGTCGGTGTGGGGAGGGAGGTGTGGTTGATACGGCAAGTTTCCAAACT
GCTAGTGACCATGGAGCTGGGAACCGAGGCACCGAGGATCACAAGCAGCT
AGCCGTCTCATCCATCAACCAAATGTGCGTTAAAAATGGCGCCAGGGCGG
CGCAGCAGGTCCCTCATGTTCACTTTCATGTTATTCCGAGGCCGCCTGAT
CGGCCGGCGGAAAGGAAGGGAAAGGCTCATTTGAGTTACGTGATGTTTGG
GCGTGGGCAGAGGGAGGATCTAGATGATGAGGAGGGGGAGAGTCTGGCTA
GGCTGTTGAGGGAGGAGTTGGCGAGGGAAGTTCAGAGGGTTAAGAGGGAG
GAGGGTGTGGATTTGGAAGGGGAGTTTGGGGGATTTGGGGTTGGAAAGGG
GAAGCTTTGAATCGGCCAATGGCTCCCCATCATCTCGCGAGTTGTGATGC
GAACGCTTTTCGGAGAGGAAGAGCAAGGGGACTTTGACTCGTTGTGGAAT
TGGAATGTGGTGCAGAATAATGCAACCCTTGGAAATGACCTCAGATCATC
ACCAATCATGCCCCTTCTGCGCCATCGCTCACAAATACCCGCCCCTCCCA
CCAACGACATTCTTCCGCCCGAAGAATTCCAGCCACGATGATCATCTAAA
TTTAGCGGCTGCGGCGGCGCCCACTACTGACATTCCTTCCCCGGAATCAT
TCGCCGAGCTGAGCAATCCAGGCTCTGGCGATGCACACCTCATCTTGTCC
ACTAGACATGTTCTTGCGTTTTTGGATATTATGCCTTTGACGAAGGGACA
TGTTTTGGTTGCGACGAGGGAGCATTGTGAGAGGTTGGGGGATGTAAGGG
TCGGTGTGGGGAGGGAGGTGTGGTTGATACGGCAAGTTTCCAAACTGCTA
GTGACCATGGAGCTGGGAACCGAGGCACCGAGGATCACAAGCAGCTAGCC
GTCTCATCCATCAACCAAATGTGCGTTAAAAATGGCGCCAGGGCGGCGCA
GCAGGTCCCTCATGTTCACTTTCATGTTATTCCGAGGCCGCCTGATCGGC
CGGCGGAAAGGAAGGGAAAGGCTCATTTGAGTTACGTGATGTTTGGGCGT
GGGCAGAGGGAGGATCTAGATGATGAGGAGGGGGAGAGTCTGGCTAGGCT
GTTGAGGGAGGAGTTGGCGAGGGAAGTTCAGAGGGTTAAGAGGGAGGAGG
GTGTGGATTTGGAAGGGGAGTTTGGGGGATTTGGGGTTGGAAAGGGGAAG
CTTTGAATCGGCCAATGGCTCCCCATCATCTCGCGAGTTGTGATGCGAAC
GCTTTTCGGAGAGGAAGAGCAAGGGGACTTTGACTCGTTGTGGAATTGGA
ATGTGGTGCAGAATAATGCAACCCTTGGAAATGACCTCAGATCATCACCA
ATCATGCCCCTTCTGCGCCATCGCTCACAAATACCCGCCCCTCCCACCAA
CGACATTCTTCCGCCCGAAGAATTCCAGCCACGATGATCATCTAAATTTA
GCGGCTGCGGCGGCGCCCACTACTGACATTCCTTCCCCGGAATCATTCGC
CGAGCTGAGCAATCCAGGCTCTGGCGATGCACACCTCATCTTGTCCACTA
GACATGTTCTTGCGTTTTTGGATATTATGCCTTTGACGAAGGGACATGTT
TTGGTTGCGACGAGGGAGCATTGTGAGAGGTTGGGGGATGTAAGGGTCGG
TGTGGGGAGGGAGGTGTGGTTGATACGGCAAGTTTCCAAACTGCTAGTGA
CCATGGAGCTGGGAACCGAGGCACCGAGGATCACAAGCAGCTAGCCGTCT
CATCCATCAACCAAATGTGCGTTAAAAATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004378ATCC10864_004378Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004378-T1ATCC10864_004378-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004378-T1.cdsATCC10864_004378-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004378-T1.exon5ATCC10864_004378-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004378-T1.exon4ATCC10864_004378-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004378-T1.exon3ATCC10864_004378-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004378-T1.exon2ATCC10864_004378-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004378-T1.exon1ATCC10864_004378-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR019808
PFAMPF01230
InterProIPR001310
InterProIPR036265
InterProIPR011146
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:461591..463152 -
Powered by Drupal