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ATCC10864_004382-T1, ATCC10864_004382-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004382-T1
Unique NameATCC10864_004382-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:472432..473715-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004382-T1 ID=ATCC10864_004382-T1|Name=ATCC10864_004382-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1284bp|location=Sequence derived from alignment at MCQH01000073:472432..473715- (Aspergillus niger ATCC 10864)
ATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTTTGGTCTTGC
ATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTGCTCGCGGGC
CTGGTTCTCATACGTATATGCCCATCCGACATATTACTATCACAGCAGAG
AAGCAAAACGCATACTGATGATGGAGGACGACGGAAAATCTAGGATTCGC
ACAATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGCAGA
CCGTACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCA
CCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCC
GTTCGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCGCGT
TTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCG
AGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGC
AGGAAGGTGAGCAAAACACACACGAGCACGAAAACAATGCGCTCAGCATC
AGGGACTTGTCAATTGACCAAACGCCCAATATCTCTAGGACGACACCCTC
ATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCATCCACCCAGACGG
ACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCTTCACAC
CATCAACCTACACAGCCCTAGAACCACACCCTCAGCCCATCCAAACAAAC
GCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGACCTCCA
CCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTTACCCGT
CCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCTGCTTGCCTTTCC
ATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGC
CCTCATCTCCCTATGGGATACAACGGACTGGATCTGCAAGCGTACTGTCT
CGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGT
AGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTT
GGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTCCTACGG
GAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGG
TATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGCCCAGGCGGTTT
GAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAG
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Coding sequence (CDS) from alignment at MCQH01000073:472432..473715-

>ATCC10864_004382-T1 ID=ATCC10864_004382-T1|Name=ATCC10864_004382-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3366bp|location=Sequence derived from alignment at MCQH01000073:472432..473715- (Aspergillus niger ATCC 10864)
GACGACACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCAT
CCACCCAGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGC
CCACCTTCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAGCCC
ATCCAAACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTC
CCCAGACCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCA
TCTCTTACCCGTCCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCT
GCTTGCCTTTCCATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGG
GGGCAGCGACGCCCTCATCTCCCTATGGGATACAACGGACTGGATCTGCA
AGCGTACTGTCTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGG
AGCTTCGACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGG
TGGTAATGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATA
CCGTTCCTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGG
CATCCTTCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGG
CCCAGGCGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGGATT
CGCACAATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGC
AGACCGTACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACT
CCACCGAACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAAC
CCCGTTCGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCG
CGTTTGGGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAG
GCGAGGCATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTT
GGCAGGAAGATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTT
TGGTCTTGCATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTG
CTCGCGGGCCTGGTTCTCATACGACGACACCCTCATACCCATCTCCGTCG
AATCCCCCTCCACCCCAACCATCCACCCAGACGGACCACTCAACGCTGCA
GCGACGCAACAACAACAGAAGCCCACCTTCACACCATCAACCTACACAGC
CCTAGAACCACACCCTCAGCCCATCCAAACAAACGCAACGACCTTCTCAC
ATCACATGTCCACCCCTTCCTCCCCAGACCTCCACCTCTTCGCCACGACC
GGCGAAGGCACCGTCAAAATCATCTCTTACCCGTCCTTTGCCAATCTCCA
CACCCTTCACGCCCACACTTCTGCTTGCCTTTCCATCTCCTTAGCACCTA
CAGGTCGCTACCTCGCCGTCGGGGGCAGCGACGCCCTCATCTCCCTATGG
GATACAACGGACTGGATCTGCAAGCGTACTGTCTCGAGCAATAACGGTGG
AGCCGTGCGTGGCGTGAGCTGGAGCTTCGACGGTAGATTCATCTGCGGCG
CTTGTGATGAGGTAGGCTGTGGTGGTAATGGGTTGGAGATCTTCCATGCG
GAAACGGGTGAGAGTGTTCATACCGTTCCTACGGGAGGAAATGCCAATTC
GGGGATTCCGGCTGTCGCGTGGCATCCTTCGAGGTATTGGCTTGCATATT
CTACTACTGCGGATGGATCGGGCCCAGGCGGTTTGAGAATTGTAGGGGCT
GCGGGTGGAAGTTTGTAGGATTCGCACAATAGCCTGGAACCCTACCGGTC
AACTTATTGCCACCGGCTCCGCAGACCGTACCCTTCGGATCTGGAACCCT
GAGCGTTCGCAAGTGAAATACTCCACCGAACTGCGCGGCCATACTGCTGG
AATTGAGAAAGTCGTGTTCAACCCCGTTCGAGACTCCGAACTGGCCAGCT
GCTCTACGGATGGAACCGTTCGCGTTTGGGATGTCCGGTCAAAGACCTGC
GTCAGTCGTCTAGACGTCGGAGGCGAGGCATTCACCTTGTCCTGGTCTGC
TGATGGAAGGGTAATGATCGTTGGCAGGAAGATGGCGCCTCCTCGACGGA
ATCTCCTCCCGAAAGACCGGTTTGGTCTTGCATTTGGTGGTCTAAAAACA
CAGAACTACCATGATCCCGCTGCTCGCGGGCCTGGTTCTCATACGACGAC
ACCCTCATACCCATCTCCGTCGAATCCCCCTCCACCCCAACCATCCACCC
AGACGGACCACTCAACGCTGCAGCGACGCAACAACAACAGAAGCCCACCT
TCACACCATCAACCTACACAGCCCTAGAACCACACCCTCAGCCCATCCAA
ACAAACGCAACGACCTTCTCACATCACATGTCCACCCCTTCCTCCCCAGA
CCTCCACCTCTTCGCCACGACCGGCGAAGGCACCGTCAAAATCATCTCTT
ACCCGTCCTTTGCCAATCTCCACACCCTTCACGCCCACACTTCTGCTTGC
CTTTCCATCTCCTTAGCACCTACAGGTCGCTACCTCGCCGTCGGGGGCAG
CGACGCCCTCATCTCCCTATGGGATACAACGGACTGGATCTGCAAGCGTA
CTGTCTCGAGCAATAACGGTGGAGCCGTGCGTGGCGTGAGCTGGAGCTTC
GACGGTAGATTCATCTGCGGCGCTTGTGATGAGGTAGGCTGTGGTGGTAA
TGGGTTGGAGATCTTCCATGCGGAAACGGGTGAGAGTGTTCATACCGTTC
CTACGGGAGGAAATGCCAATTCGGGGATTCCGGCTGTCGCGTGGCATCCT
TCGAGGTATTGGCTTGCATATTCTACTACTGCGGATGGATCGGGCCCAGG
CGGTTTGAGAATTGTAGGGGCTGCGGGTGGAAGTTTGTAGGATTCGCACA
ATAGCCTGGAACCCTACCGGTCAACTTATTGCCACCGGCTCCGCAGACCG
TACCCTTCGGATCTGGAACCCTGAGCGTTCGCAAGTGAAATACTCCACCG
AACTGCGCGGCCATACTGCTGGAATTGAGAAAGTCGTGTTCAACCCCGTT
CGAGACTCCGAACTGGCCAGCTGCTCTACGGATGGAACCGTTCGCGTTTG
GGATGTCCGGTCAAAGACCTGCGTCAGTCGTCTAGACGTCGGAGGCGAGG
CATTCACCTTGTCCTGGTCTGCTGATGGAAGGGTAATGATCGTTGGCAGG
AAGATGGCGCCTCCTCGACGGAATCTCCTCCCGAAAGACCGGTTTGGTCT
TGCATTTGGTGGTCTAAAAACACAGAACTACCATGATCCCGCTGCTCGCG
GGCCTGGTTCTCATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006406mRNA export from nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004382ATCC10864_004382Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004382-T1ATCC10864_004382-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004382-T1.cdsATCC10864_004382-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004382-T1.exon3ATCC10864_004382-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004382-T1.exon2ATCC10864_004382-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004382-T1.exon1ATCC10864_004382-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR024977
InterProIPR040132
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
PFAMPF12894
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:472432..473715 -
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