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ATCC10864_004393-T1, ATCC10864_004393-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004393-T1
Unique NameATCC10864_004393-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:498715..499483+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004393-T1 ID=ATCC10864_004393-T1|Name=ATCC10864_004393-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=769bp|location=Sequence derived from alignment at MCQH01000073:498715..499483+ (Aspergillus niger ATCC 10864)
ATGACAAGCGCAACAACATCAACAACAACAACAACCCCACCCTTCCAATT
CCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCA
CGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGG
TGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTC
ACCATTATTCCATAACACGACGCTCCGAAAGCGCATCTCGATGAGCGATG
CGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGC
GGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGAT
TTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTAT
GTATTCTTATATTCCGGATCATCATTCGAGATGTTGGAGGGGAGTTGGGG
GTAGAGTTGGGATTGAGGGGAGATAGTTGCTAATTGCTTATTTTTGCTGT
ATAGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGT
TGTTGGAGGGGGAGGCCACGATGTCGCACGGTAGGTTAAGTGGATTTGCT
CCTAATCATTGGGTGATGCTGGTATGGTATGGTGGCTAATGGTTCGGCTG
GAATAGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAAT
GTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGA
GGGTGTCAAGTTCTTCTAG
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Coding sequence (CDS) from alignment at MCQH01000073:498715..499483+

>ATCC10864_004393-T1 ID=ATCC10864_004393-T1|Name=ATCC10864_004393-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1755bp|location=Sequence derived from alignment at MCQH01000073:498715..499483+ (Aspergillus niger ATCC 10864)
ATGACAAGCGCAACAACATCAACAACAACAACAACCCCACCCTTCCAATT
CCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCA
CGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGG
TGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTC
ACCATTATTCCATAACACGACGCTCCGAAAGCGCATCTCGATGAGCGATG
CGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGC
GGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGAT
TTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGG
AAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAG
GGGGAGGCCACGATGTCGCACGAATGGCATGGGATGGACCCCGATGTGAT
GCACAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCG
GTAGCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACA
ACATCAACAACAACAACAACCCCACCCTTCCAATTCCCCCTCACCTACTC
ATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGACACGCACCTCCC
AACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGCCGACACCACCGC
GTCTACCGACTATCGTTAATCGAAGCCATCGAGTCACCATTATTCCATAA
CACGACGCTCCGAAAGCGCATCTCGATGAGCGATGCGCGGGATATTCTAG
ACTGGATGGCGAAAAGTGAAGAGGAGGGTGGTGGCGGGAAGAGAGCGGAG
TGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCC
TGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGGAAAACACTGGCCAGA
AGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATG
TCGCACGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAA
TGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGG
AGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACAACATCAACAACAACA
ACAACCCCACCCTTCCAATTCCCCCTCACCTACTCATTTCCAGCCTTCTT
CACCCCCCAACCCAACAGCACGACACGCACCTCCCAACTCCAAAAATGGT
CTTCCCTGATCCAATCCTGGTGCCGACACCACCGCGTCTACCGACTATCG
TTAATCGAAGCCATCGAGTCACCATTATTCCATAACACGACGCTCCGAAA
GCGCATCTCGATGAGCGATGCGCGGGATATTCTAGACTGGATGGCGAAAA
GTGAAGAGGAGGGTGGTGGCGGGAAGAGAGCGGAGTGGATTGATGGTGGG
AGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCCTGAGGAGTGGGCAGG
GTTGATTGCGGATTGGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTA
CGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCACGAATGGCAT
GGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTTCTCGTGAAACG
GGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTCAAGTTCT
TCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004393ATCC10864_004393Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004393-T1.exon1ATCC10864_004393-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004393-T1.exon2ATCC10864_004393-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004393-T1.exon3ATCC10864_004393-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004393-T1.cdsATCC10864_004393-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004393-T1ATCC10864_004393-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF05871
InterProIPR036388
InterProIPR008570
InterProIPR014041
InterProIPR036390
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:498715..499483 +
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