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ATCC10864_004413-T1, ATCC10864_004413-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004413-T1
Unique NameATCC10864_004413-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:557434..558244+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004413-T1 ID=ATCC10864_004413-T1|Name=ATCC10864_004413-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=811bp|location=Sequence derived from alignment at MCQH01000073:557434..558244+ (Aspergillus niger ATCC 10864)
ATGTACGGCGAACACGGAAACAAGCTCGTATGTGCTTTTCTAATGAGCCA
TGCTTTATGAATAACCCGTCCTGACGAAACCCACAAACAGGTTCAACATG
CCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTG
GTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACA
CCTCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCG
TTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGA
TGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATG
CTGGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAG
GGGCTGCAGGTGCATCAAGCCAGGGGAACGGGGGATATGCAGCGATGGGC
ACTGCGAGTGGGAACCACAGTTCCCTGAGTCCGGAAGAAGAAGAATACTT
CCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATA
TTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTG
AGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGGGTATGTGAG
GCATTTTCTATATTTTCCCTCGCGCGTATTGTTGATCGGCAGGTTGGAAT
GCTGACATTGCATATAGGGTGATCAATTTGACGAAAAACAGTCAACTCTA
CGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCTAGAGC
GTCTGAGTTGA
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Coding sequence (CDS) from alignment at MCQH01000073:557434..558244+

>ATCC10864_004413-T1 ID=ATCC10864_004413-T1|Name=ATCC10864_004413-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2016bp|location=Sequence derived from alignment at MCQH01000073:557434..558244+ (Aspergillus niger ATCC 10864)
ATGTACGGCGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCA
AGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAG
CCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCA
TTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCT
CTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCT
ACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTT
GATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGC
ATCAAGCCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGA
ACCACAGTTCCCTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGC
GATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGG
AAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGG
ATGCGGGGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAAC
AGTCAACTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGG
GTTTCTAGAGCGTCTGAGTTGAATGTACGGCGAACACGGAAACAAGCTCG
TTCAACATGCCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAA
ACCGAATTGGTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGA
TGTCGCACACCTCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAG
AACCAGCCGTTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGC
AACAAACGATGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGA
GGAGCTATGCTGGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGG
CAGACGAAGGGGCTGCAGGTGCATCAAGCCAGGGGAACGGGGGATATGCA
GCGATGGGCACTGCGAGTGGGAACCACAGTTCCCTGAGTCCGGAAGAAGA
AGAATACTTCCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGT
GGACAGATATTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTC
ATAGACGTGAGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGG
GGTGATCAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAGGGGATG
TGGAACGATTAATCGCGCAGGGGTTTCTAGAGCGTCTGAGTTGAATGTAC
GGCGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCAAGCTCT
CACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAGCCCGCG
AAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCATTCGAA
GGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCTCTTAGT
GGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCTACCACC
GTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTTGATTTG
CTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGCATCAAG
CCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGAACCACA
GTTCCCTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGCGATCTT
CTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGGAAGCCT
GGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGGATGCGG
GGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAACAGTCAA
CTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCT
AGAGCGTCTGAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000811GINS complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF1ATCC10864_004413Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004413-T1.exon1ATCC10864_004413-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004413-T1.exon2ATCC10864_004413-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004413-T1.exon3ATCC10864_004413-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004413-T1.cdsATCC10864_004413-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004413-T1ATCC10864_004413-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036224
PFAMPF05916
InterProIPR021151
InterProIPR005339
Properties
Property NameValue
NoteBUSCO:EOG092648K5
ProductDNA replication protein psf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:557434..558244 +
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