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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000074:40130..42029+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004460-T1 ID=ATCC10864_004460-T1|Name=ATCC10864_004460-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1900bp|location=Sequence derived from alignment at MCQH01000074:40130..42029+ (Aspergillus niger ATCC 10864)
ATGAAAAGAGATACTTCATCATTATCCGACATCCAACCAGTGTACGACTA
TGTCGTCGTTGGGGGAGGAACTTCCGGGTTGGTCGTGGCCAGCCGATTGA
CTGAAGACCCCGCAGTCAGCGTTCTGGTCTTGGAGGCTGGAAGCGATCGT
GTCGACGATCCGCGTATCGCAGCCCCTGGCCTCTCGGCCAGTACCTACTT
TGACCCTGAGTTCGACTGGGGACTTATAAGCGAACCTCAGGTATATATCC
AAATCTCTCCTTTAGTGTCTCACTCACATAAATCAGGAAGGCCTTAATGG
CCGACGCCTTGCTCAATCCCGCGGCCGAACACTAGGAGGCTCCTCGGCTA
TCAACATGGGAATGGCAATCTACCCTAGCCGTAACGATATCGATGCATGG
GAGCAGCTGGGAAACCCGGGCTGGAACTGGAAGTCTCTATCCACCTACAT
GCGAAAATCGCAGACATTCATACCGCCATCGAATGAGGTTCGGGACCAGC
TATCGCTTGGCTATGTTGATCCAGATGTTCAAGGGACCGATGGACCCATA
CAGATTTCATTTGGCAATGGGCCTTTCCCGGCATTCACTGCCGCCTGGCC
TCGGACATTTGAGGCTTTAAATCATCGGCTGACAGGCGATCCAATGTCTG
GTCGGGCCAATGGTGCCTTTTGCAACCCGGCTACAATTCACGGAACCTCA
CGGGCTCGTAGTCACGCGGGCGTCGCCTATTACACCCCCGAAATAGCGCA
GCGCTCTAACCTCCGAGTCATTACTGAAGCATTTGTGGAGAAGGTTTTGC
TCGGCAAAACAAATTGTGTCGATGACGGCCAGGCCATCGCGACGGGCATC
CAATTCCGAGGGAACGATGGAACTCAACGCACAGTGGCCGCAAGAGCCGA
GGTTATCCTGGCAGCCGGCACAATCAAAACACCGCATCTGCTAGAGCTCT
CAGGCATCGGTGACGCCAAGCGTCTTCAAGAGCATGGTATCAATACCCTC
ATCGACAATCCTAATGTAGGCGAGAACCTGCAAGAACATGGCCTCGTCCC
ATTTACCTGGGAGGCTGCCGATGGCCAGATAACTGGGGAAGCCTTACGCG
ACCCTGAGGTAGCCAAAGCCGCCATGGAGGCGTGGCAATCTTCGGGGGCT
GGGCCATTAGGTTCCCACCCACTAGCTTCGGCTTTCATGACTCTCCCAGA
GCTGGAAAAGGGTGAGTTATCTGGCCTCATAGAAAAGCACTTGAATGAGG
ACGGTTCAGCCAGACAAACCGCGCAGTACCGTATCCTCCGCCAATTTCTC
GAAGATGCCGACGAGCCGACGTGTCAGTATACGCTAGCACCATTCCAGAT
GACGCCCGACAAAGGCCCCGATCCTAAAGGTACCTTTAGCATGTTGGAGC
CAGGAAACTACGTTAGTATAGTGGCTGTCTTGAACCGGCCATTTTCCCGA
GGCTCAGTACACTTGGCCTCCTCAGATCCGACAGAGCTGCCGACCTTCGA
CCCCCGTATGCTGTCACATCCACTCGACCTGGAGATCCAAGCGCGCCATG
TAATATGGCTTGAGACGCTGGCAGCCACCGAGCCCATGGCATCGCTGCTG
AAGCCCAACGGCCGTCGACTGCATTATCCGACGCGCGTGACAAGCTTAGA
AACAGCGCGGGAGCTCACGCGGGACCGCTTACTATGTCATTATCATGTTT
TAGGAACAGCAGCCATGATGCCGCGAGAACTTGGAGGTGTGGTTGATGAT
CGGCTGAGGGTATATGGGTGTCGAAATTTGCGCGTGGTGGATGCCAGCGT
GATTCCATTGATTCCTCGCGGCAATATCCAGACGACAGTGTATGCTGTGG
CCGAAAAGGCTGCTGATATTATCAAGGAGGATAGATTGGCTTCACTGTGA
back to topCoding sequence (CDS) from alignment at MCQH01000074:40130..42029+ >ATCC10864_004460-T1 ID=ATCC10864_004460-T1|Name=ATCC10864_004460-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3708bp|location=Sequence derived from alignment at MCQH01000074:40130..42029+ (Aspergillus niger ATCC 10864)
ATGAAAAGAGATACTTCATCATTATCCGACATCCAACCAGTGTACGACTA
TGTCGTCGTTGGGGGAGGAACTTCCGGGTTGGTCGTGGCCAGCCGATTGA
CTGAAGACCCCGCAGTCAGCGTTCTGGTCTTGGAGGCTGGAAGCGATCGT
GTCGACGATCCGCGTATCGCAGCCCCTGGCCTCTCGGCCAGTACCTACTT
TGACCCTGAGTTCGACTGGGGACTTATAAGCGAACCTCAGGAAGGCCTTA
ATGGCCGACGCCTTGCTCAATCCCGCGGCCGAACACTAGGAGGCTCCTCG
GCTATCAACATGGGAATGGCAATCTACCCTAGCCGTAACGATATCGATGC
ATGGGAGCAGCTGGGAAACCCGGGCTGGAACTGGAAGTCTCTATCCACCT
ACATGCGAAAATCGCAGACATTCATACCGCCATCGAATGAGGTTCGGGAC
CAGCTATCGCTTGGCTATGTTGATCCAGATGTTCAAGGGACCGATGGACC
CATACAGATTTCATTTGGCAATGGGCCTTTCCCGGCATTCACTGCCGCCT
GGCCTCGGACATTTGAGGCTTTAAATCATCGGCTGACAGGCGATCCAATG
TCTGGTCGGGCCAATGGTGCCTTTTGCAACCCGGCTACAATTCACGGAAC
CTCACGGGCTCGTAGTCACGCGGGCGTCGCCTATTACACCCCCGAAATAG
CGCAGCGCTCTAACCTCCGAGTCATTACTGAAGCATTTGTGGAGAAGGTT
TTGCTCGGCAAAACAAATTGTGTCGATGACGGCCAGGCCATCGCGACGGG
CATCCAATTCCGAGGGAACGATGGAACTCAACGCACAGTGGCCGCAAGAG
CCGAGGTTATCCTGGCAGCCGGCACAATCAAAACACCGCATCTGCTAGAG
CTCTCAGGCATCGGTGACGCCAAGCGTCTTCAAGAGCATGGTATCAATAC
CCTCATCGACAATCCTAATGTAGGCGAGAACCTGCAAGAACATGGCCTCG
TCCCATTTACCTGGGAGGCTGCCGATGGCCAGATAACTGGGGAAGCCTTA
CGCGACCCTGAGGTAGCCAAAGCCGCCATGGAGGCGTGGCAATCTTCGGG
GGCTGGGCCATTAGGTTCCCACCCACTAGCTTCGGCTTTCATGACTCTCC
CAGAGCTGGAAAAGGGTGAGTTATCTGGCCTCATAGAAAAGCACTTGAAT
GAGGACGGTTCAGCCAGACAAACCGCGCAGTACCGTATCCTCCGCCAATT
TCTCGAAGATGCCGACGAGCCGACGTGTCAGTATACGCTAGCACCATTCC
AGATGACGCCCGACAAAGGCCCCGATCCTAAAGGTACCTTTAGCATGTTG
GAGCCAGGAAACTACGTTAGTATAGTGGCTGTCTTGAACCGGCCATTTTC
CCGAGGCTCAGTACACTTGGCCTCCTCAGATCCGACAGAGCTGCCGACCT
TCGACCCCCGTATGCTGTCACATCCACTCGACCTGGAGATCCAAGCGCGC
CATGTAATATGGCTTGAGACGCTGGCAGCCACCGAGCCCATGGCATCGCT
GCTGAAGCCCAACGGCCGTCGACTGCATTATCCGACGCGCGTGACAAGCT
TAGAAACAGCGCGGGAGCTCACGCGGGACCGCTTACTATGTCATTATCAT
GTTTTAGGAACAGCAGCCATGATGCCGCGAGAACTTGGAGGTGTGGTTGA
TGATCGGCTGAGGGTATATGGGTGTCGAAATTTGCGCGTGGTGGATGCCA
GCGTGATTCCATTGATTCCTCGCGGCAATATCCAGACGACAGTGTATGCT
GTGGCCGAAAAGGCTGCTGATATTATCAAGGAGGATAGATTGGCTTCACT
GTGAATGAAAAGAGATACTTCATCATTATCCGACATCCAACCAGTGTACG
ACTATGTCGTCGTTGGGGGAGGAACTTCCGGGTTGGTCGTGGCCAGCCGA
TTGACTGAAGACCCCGCAGTCAGCGTTCTGGTCTTGGAGGCTGGAAGCGA
TCGTGTCGACGATCCGCGTATCGCAGCCCCTGGCCTCTCGGCCAGTACCT
ACTTTGACCCTGAGTTCGACTGGGGACTTATAAGCGAACCTCAGGAAGGC
CTTAATGGCCGACGCCTTGCTCAATCCCGCGGCCGAACACTAGGAGGCTC
CTCGGCTATCAACATGGGAATGGCAATCTACCCTAGCCGTAACGATATCG
ATGCATGGGAGCAGCTGGGAAACCCGGGCTGGAACTGGAAGTCTCTATCC
ACCTACATGCGAAAATCGCAGACATTCATACCGCCATCGAATGAGGTTCG
GGACCAGCTATCGCTTGGCTATGTTGATCCAGATGTTCAAGGGACCGATG
GACCCATACAGATTTCATTTGGCAATGGGCCTTTCCCGGCATTCACTGCC
GCCTGGCCTCGGACATTTGAGGCTTTAAATCATCGGCTGACAGGCGATCC
AATGTCTGGTCGGGCCAATGGTGCCTTTTGCAACCCGGCTACAATTCACG
GAACCTCACGGGCTCGTAGTCACGCGGGCGTCGCCTATTACACCCCCGAA
ATAGCGCAGCGCTCTAACCTCCGAGTCATTACTGAAGCATTTGTGGAGAA
GGTTTTGCTCGGCAAAACAAATTGTGTCGATGACGGCCAGGCCATCGCGA
CGGGCATCCAATTCCGAGGGAACGATGGAACTCAACGCACAGTGGCCGCA
AGAGCCGAGGTTATCCTGGCAGCCGGCACAATCAAAACACCGCATCTGCT
AGAGCTCTCAGGCATCGGTGACGCCAAGCGTCTTCAAGAGCATGGTATCA
ATACCCTCATCGACAATCCTAATGTAGGCGAGAACCTGCAAGAACATGGC
CTCGTCCCATTTACCTGGGAGGCTGCCGATGGCCAGATAACTGGGGAAGC
CTTACGCGACCCTGAGGTAGCCAAAGCCGCCATGGAGGCGTGGCAATCTT
CGGGGGCTGGGCCATTAGGTTCCCACCCACTAGCTTCGGCTTTCATGACT
CTCCCAGAGCTGGAAAAGGGTGAGTTATCTGGCCTCATAGAAAAGCACTT
GAATGAGGACGGTTCAGCCAGACAAACCGCGCAGTACCGTATCCTCCGCC
AATTTCTCGAAGATGCCGACGAGCCGACGTGTCAGTATACGCTAGCACCA
TTCCAGATGACGCCCGACAAAGGCCCCGATCCTAAAGGTACCTTTAGCAT
GTTGGAGCCAGGAAACTACGTTAGTATAGTGGCTGTCTTGAACCGGCCAT
TTTCCCGAGGCTCAGTACACTTGGCCTCCTCAGATCCGACAGAGCTGCCG
ACCTTCGACCCCCGTATGCTGTCACATCCACTCGACCTGGAGATCCAAGC
GCGCCATGTAATATGGCTTGAGACGCTGGCAGCCACCGAGCCCATGGCAT
CGCTGCTGAAGCCCAACGGCCGTCGACTGCATTATCCGACGCGCGTGACA
AGCTTAGAAACAGCGCGGGAGCTCACGCGGGACCGCTTACTATGTCATTA
TCATGTTTTAGGAACAGCAGCCATGATGCCGCGAGAACTTGGAGGTGTGG
TTGATGATCGGCTGAGGGTATATGGGTGTCGAAATTTGCGCGTGGTGGAT
GCCAGCGTGATTCCATTGATTCCTCGCGGCAATATCCAGACGACAGTGTA
TGCTGTGGCCGAAAAGGCTGCTGATATTATCAAGGAGGATAGATTGGCTT
CACTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF05199 |
| InterPro | IPR000172 |
| PFAM | PF00732 |
| InterPro | IPR036188 |
| InterPro | IPR012132 |
| InterPro | IPR007867 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:AA3 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000074 | supercontig | MCQH01000074:40130..42029 + |
|
