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ATCC10864_004488-T1, ATCC10864_004488-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004488-T1
Unique NameATCC10864_004488-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:116787..118604+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004488-T1 ID=ATCC10864_004488-T1|Name=ATCC10864_004488-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1818bp|location=Sequence derived from alignment at MCQH01000074:116787..118604+ (Aspergillus niger ATCC 10864)
ATGCAGGCCTATCTTCAGTACCGCCGCATTGGCCATGCCGTGCGCCAACA
GCTCGAAGATTTCCCGGAGTTTGCCCGACCAGGCGTCGCCAAAGATGACC
TGCCGGAGGGGATCCCCAGAGATGCTCCCAACGCAGTTTCGCGCCGCCGT
TCCAGTCCGCTGCTGCCGGGCGTGCAGCTGAAGGACGTAGTCGACAACGA
TGGCTCGTCCTCGTCCGTCTTGCTCGTCGACTGGGACGGTGACCATGATC
CCATCAATCCGCGCAACTACAGCCGCGCCACCCGCATCGGCGCAACCCTG
ATGGTGTCCGCGCTGGGTTTCGCCGTGGGTGCGGCCTCGTCCATCGAATC
TGGCGTGCTTCCCCAGAACGCAGCAGCCTTTAACATCAGCGATGTCGTCG
CATCGCTCGCAACGGGCATGTATCTGCTTGGCTTCGCAGCAGGCTCGCTC
GTCTCTGGACCTCTGTCCGAAATTCTAGGCCGCAATGCCGTCTACACCGG
CTCCCTCACGCTATTCATGATCTTCGTCATGGCCTCAGGACTGGCCCCCA
ATATCGGCGCACAGCTCGCTTTCCGCTTCCTGGCTGGCATCTTCGGCTGT
CCACCATTAACCTGCGCCGGCGGCACCATCGCCGACCTCTGGAACCCCCT
GGAGAAAACCCTCTTCTTCCCTCTCTACGCCATCCTCTCCTTCGGCGGGC
CCGTCCTCGGCCCTGTCATCGCCTCCTACATGGGCGAAGGCACCCTTTCC
TGGCGCTGGACCAACTGGATCATCCTCATTCTGGCAGGCTTCATCCTGGC
TCTGATCCTCCTGCTGCAGCCCGAGACCTACGGCCCCCTACTCCTGAAAT
GGAAGGCGCACCATCTCCGCCAGCAAACGGGCGACAATCGCTACCGCTCA
TCAATGGATCTGCAGGAGACGGCGCTGTTCTCTCGCATCGGAACCGCCTG
CATGCGACAATTCGCCCTGACCATCCACGAACCCATCATCCTGCTAATCT
CCCTCTACATGACCGTCATCTACATCGTACTCTTCACTTTCTTCGACGGA
TACACGTATATTTTCAGCGACGTGCACGGCCTCTCCCAAGGCCTGACCAA
CATCGTCTGGGTCGCCATGTACGTCGGCATTTCAATGGCCGGACTCTTCG
TCCCCGTCGTGTACGTCTGGACAAAGCGCGAATTCTCCGACGCGGCTGCA
TCCGCTGCTGCATCTGCAGCGGCTTCCCCCCGATCGGCCAGTTCGGAAAT
AGTCACTGCCGATCCCAACGCCAATGGCGCCGATACCTCTGAGAAACCGA
ACCTCGACGACGATGATACTCAAAAACCCACCCAGCAACACAAGCACGTC
GCTCGTCCCGAGAACCGTCTCTGGTTCGCCATGCTCGGTGCCCCCGCCAT
TCCCATTGGGTTATTCTGGATGGGATGGACTGACTACGTACACCTCCCCC
CCCTCTCTCACCCCCAGTTCTAAAACAATACTAACATGATGAACAAATAG
AGCTCAATTTCAATCTGGTCCCCCATCATCGCATCCACCGTCTTCGGCTT
CGGCACCATCTGCGTCTTCATCTCCTCGTACATGTACGTCATCGACGCAT
ACGACATCTACGCCGCCTCTGCGCTGGGCTTCATGACGGTATCGCGCTAC
TGTGCGGCAGGCGGGATGACGGTCGTGGGGATCCCGTTTTATAGTAATAT
GGGGGTGCATTGGACGTTGACGATCTTGGGGGCGATTAGTGCGTTGATGA
CTCCTGTGCCGTATGTGTTTTATCGCTATGGAGTGGTGATTCGGGGGTGG
AGTCGGTATGCGGTTTAG
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Coding sequence (CDS) from alignment at MCQH01000074:116787..118604+

>ATCC10864_004488-T1 ID=ATCC10864_004488-T1|Name=ATCC10864_004488-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3510bp|location=Sequence derived from alignment at MCQH01000074:116787..118604+ (Aspergillus niger ATCC 10864)
ATGCAGGCCTATCTTCAGTACCGCCGCATTGGCCATGCCGTGCGCCAACA
GCTCGAAGATTTCCCGGAGTTTGCCCGACCAGGCGTCGCCAAAGATGACC
TGCCGGAGGGGATCCCCAGAGATGCTCCCAACGCAGTTTCGCGCCGCCGT
TCCAGTCCGCTGCTGCCGGGCGTGCAGCTGAAGGACGTAGTCGACAACGA
TGGCTCGTCCTCGTCCGTCTTGCTCGTCGACTGGGACGGTGACCATGATC
CCATCAATCCGCGCAACTACAGCCGCGCCACCCGCATCGGCGCAACCCTG
ATGGTGTCCGCGCTGGGTTTCGCCGTGGGTGCGGCCTCGTCCATCGAATC
TGGCGTGCTTCCCCAGAACGCAGCAGCCTTTAACATCAGCGATGTCGTCG
CATCGCTCGCAACGGGCATGTATCTGCTTGGCTTCGCAGCAGGCTCGCTC
GTCTCTGGACCTCTGTCCGAAATTCTAGGCCGCAATGCCGTCTACACCGG
CTCCCTCACGCTATTCATGATCTTCGTCATGGCCTCAGGACTGGCCCCCA
ATATCGGCGCACAGCTCGCTTTCCGCTTCCTGGCTGGCATCTTCGGCTGT
CCACCATTAACCTGCGCCGGCGGCACCATCGCCGACCTCTGGAACCCCCT
GGAGAAAACCCTCTTCTTCCCTCTCTACGCCATCCTCTCCTTCGGCGGGC
CCGTCCTCGGCCCTGTCATCGCCTCCTACATGGGCGAAGGCACCCTTTCC
TGGCGCTGGACCAACTGGATCATCCTCATTCTGGCAGGCTTCATCCTGGC
TCTGATCCTCCTGCTGCAGCCCGAGACCTACGGCCCCCTACTCCTGAAAT
GGAAGGCGCACCATCTCCGCCAGCAAACGGGCGACAATCGCTACCGCTCA
TCAATGGATCTGCAGGAGACGGCGCTGTTCTCTCGCATCGGAACCGCCTG
CATGCGACAATTCGCCCTGACCATCCACGAACCCATCATCCTGCTAATCT
CCCTCTACATGACCGTCATCTACATCGTACTCTTCACTTTCTTCGACGGA
TACACGTATATTTTCAGCGACGTGCACGGCCTCTCCCAAGGCCTGACCAA
CATCGTCTGGGTCGCCATGTACGTCGGCATTTCAATGGCCGGACTCTTCG
TCCCCGTCGTGTACGTCTGGACAAAGCGCGAATTCTCCGACGCGGCTGCA
TCCGCTGCTGCATCTGCAGCGGCTTCCCCCCGATCGGCCAGTTCGGAAAT
AGTCACTGCCGATCCCAACGCCAATGGCGCCGATACCTCTGAGAAACCGA
ACCTCGACGACGATGATACTCAAAAACCCACCCAGCAACACAAGCACGTC
GCTCGTCCCGAGAACCGTCTCTGGTTCGCCATGCTCGGTGCCCCCGCCAT
TCCCATTGGGTTATTCTGGATGGGATGGACTGACTACAGCTCAATTTCAA
TCTGGTCCCCCATCATCGCATCCACCGTCTTCGGCTTCGGCACCATCTGC
GTCTTCATCTCCTCGTACATGTACGTCATCGACGCATACGACATCTACGC
CGCCTCTGCGCTGGGCTTCATGACGGTATCGCGCTACTGTGCGGCAGGCG
GGATGACGGTCGTGGGGATCCCGTTTTATAGTAATATGGGGGTGCATTGG
ACGTTGACGATCTTGGGGGCGATTAGTGCGTTGATGACTCCTGTGCCGTA
TGTGTTTTATCGCTATGGAGTGGTGATTCGGGGGTGGAGTCGGTATGCGG
TTTAGATGCAGGCCTATCTTCAGTACCGCCGCATTGGCCATGCCGTGCGC
CAACAGCTCGAAGATTTCCCGGAGTTTGCCCGACCAGGCGTCGCCAAAGA
TGACCTGCCGGAGGGGATCCCCAGAGATGCTCCCAACGCAGTTTCGCGCC
GCCGTTCCAGTCCGCTGCTGCCGGGCGTGCAGCTGAAGGACGTAGTCGAC
AACGATGGCTCGTCCTCGTCCGTCTTGCTCGTCGACTGGGACGGTGACCA
TGATCCCATCAATCCGCGCAACTACAGCCGCGCCACCCGCATCGGCGCAA
CCCTGATGGTGTCCGCGCTGGGTTTCGCCGTGGGTGCGGCCTCGTCCATC
GAATCTGGCGTGCTTCCCCAGAACGCAGCAGCCTTTAACATCAGCGATGT
CGTCGCATCGCTCGCAACGGGCATGTATCTGCTTGGCTTCGCAGCAGGCT
CGCTCGTCTCTGGACCTCTGTCCGAAATTCTAGGCCGCAATGCCGTCTAC
ACCGGCTCCCTCACGCTATTCATGATCTTCGTCATGGCCTCAGGACTGGC
CCCCAATATCGGCGCACAGCTCGCTTTCCGCTTCCTGGCTGGCATCTTCG
GCTGTCCACCATTAACCTGCGCCGGCGGCACCATCGCCGACCTCTGGAAC
CCCCTGGAGAAAACCCTCTTCTTCCCTCTCTACGCCATCCTCTCCTTCGG
CGGGCCCGTCCTCGGCCCTGTCATCGCCTCCTACATGGGCGAAGGCACCC
TTTCCTGGCGCTGGACCAACTGGATCATCCTCATTCTGGCAGGCTTCATC
CTGGCTCTGATCCTCCTGCTGCAGCCCGAGACCTACGGCCCCCTACTCCT
GAAATGGAAGGCGCACCATCTCCGCCAGCAAACGGGCGACAATCGCTACC
GCTCATCAATGGATCTGCAGGAGACGGCGCTGTTCTCTCGCATCGGAACC
GCCTGCATGCGACAATTCGCCCTGACCATCCACGAACCCATCATCCTGCT
AATCTCCCTCTACATGACCGTCATCTACATCGTACTCTTCACTTTCTTCG
ACGGATACACGTATATTTTCAGCGACGTGCACGGCCTCTCCCAAGGCCTG
ACCAACATCGTCTGGGTCGCCATGTACGTCGGCATTTCAATGGCCGGACT
CTTCGTCCCCGTCGTGTACGTCTGGACAAAGCGCGAATTCTCCGACGCGG
CTGCATCCGCTGCTGCATCTGCAGCGGCTTCCCCCCGATCGGCCAGTTCG
GAAATAGTCACTGCCGATCCCAACGCCAATGGCGCCGATACCTCTGAGAA
ACCGAACCTCGACGACGATGATACTCAAAAACCCACCCAGCAACACAAGC
ACGTCGCTCGTCCCGAGAACCGTCTCTGGTTCGCCATGCTCGGTGCCCCC
GCCATTCCCATTGGGTTATTCTGGATGGGATGGACTGACTACAGCTCAAT
TTCAATCTGGTCCCCCATCATCGCATCCACCGTCTTCGGCTTCGGCACCA
TCTGCGTCTTCATCTCCTCGTACATGTACGTCATCGACGCATACGACATC
TACGCCGCCTCTGCGCTGGGCTTCATGACGGTATCGCGCTACTGTGCGGC
AGGCGGGATGACGGTCGTGGGGATCCCGTTTTATAGTAATATGGGGGTGC
ATTGGACGTTGACGATCTTGGGGGCGATTAGTGCGTTGATGACTCCTGTG
CCGTATGTGTTTTATCGCTATGGAGTGGTGATTCGGGGGTGGAGTCGGTA
TGCGGTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004488ATCC10864_004488Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004488-T1.exon1ATCC10864_004488-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004488-T1.exon2ATCC10864_004488-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004488-T1.cdsATCC10864_004488-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004488-T1ATCC10864_004488-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:116787..118604 +
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