You are here

Home

ATCC10864_004493-T1, ATCC10864_004493-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004493-T1
Unique NameATCC10864_004493-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:134470..135985-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004493-T1 ID=ATCC10864_004493-T1|Name=ATCC10864_004493-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1516bp|location=Sequence derived from alignment at MCQH01000074:134470..135985- (Aspergillus niger ATCC 10864)
ATGGATGCGCCATTAGACGGGCTGGCTTGTATGCACTTCGCCCTCATTTA
TATAGACGACAATGGCAAATTACGCTTTGAGGCATCGCAATCAATCGCGA
ACAACTGCCAGACAATTCTCTCTCCCAGTGTGACGGAAAACTTTCTGCGT
GCGGTGGCACTGTCGGGCAAAGGTGATCCATCCAAAATGCTCGGTAGGGT
TCCTTGTCGAGATCTCGCACGGATACCTTGTTGACACCAATACAACAGAA
GACATCAGAGGGAGAAGCCCACTCTCCCCAGAATCTCCCAGCGCCAGCGA
TCTATCAGCTAAACACATGTACTTGCGCCCTTTTTTGATCTCAACGCGAC
CCAACCACTGATCATCTTCAGGTTCCACTCCACTACAGAACCCCCTCAAT
CCAAAAGGAAGCGGGTATCCCATGAATGCCTCGTCCCCATGAGCATCACT
TGTCACCAAAAGTCCATGCTGCCCGTGCGCAACACCGGCCTTCTGCGCAG
ATACTATGAGAAAGCCTTCGACAGCCTGCAGCAGATTAACTGTCGTATCC
TCGCCAAAGCATACATTAAGCTCGTGGAACCCCGGAAGCAGGTTAACTAT
CCATACAATGGACGCAAGATTATATCCGGCTCATCGCAGCAATTTGATCC
TGAGCTGACCAAGCCAGCCTGGTGGCCGGCGGGTGTCACTCACCGCGAAC
CAGACCATCTTCTCAAAGCGGGTGTGTTTTATCCTCGCTTTGCTCCCTGC
ATCAGTCGCTCTAACCTTGGATATAGAACGTATTCGCCTGCTTGTCCATA
TCCTCTGCGAGCTGCGTGAAAGTCACGCTATCTGCGTGGAGAAACTGAAG
GAGGCCGACCAGTCTGTTCGGCGCCAAATTGCCCCCGTCGAACGCATTCC
CGTTCTCGATGAGATCTACCACGTACGAGAGGAGGAGGAACGATACCTAG
ACGGTCGAACAGGTAAGCGTTTTCTATCCACTATTGGTTCTTTCGGACAC
ATCTCATACTTAGCTACTGCAGATGGCTCCGCCGTGATTTGCGTTTCCCG
CGTCCACCTCCCAGAGCTCACCGACTCCCAGGCTCTGGGCTCGCCCACTC
AGGCCCTCAAGGAAAGCAATCCCGTCTACAGGAAGGAAATTCCTGATCTC
GAATCGCACACATCCGTCTTCCCTTCTACCGCCACCACCTCCCCGCTCAC
GTCAAAGCCACCCACATCCAAGGCGTCAGACCCGTGCAAGCCTCCTATCC
CTACAGCATGGGATACCGATGCATCGGCCTCGTTCGCGCCGATCAAGCGC
CACCGCGAGGGCGATTATCCCCTTGACCTCACCGGGGGAGCCATATTTCA
CCAGGAGCCGTCAGCGGCAGCGGCAGCAGCCGCGACAACAACCCTGGATG
CCAATCCTTATTCAATGAAGTATTACCCACACAGCCAAGCACAGCAGTCC
TTACCTGTAATGGGGCTCTCTGGGGACCTCGGAAGCTGCACACATCCATA
CTACTTTAATTATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000074:134470..135985-

>ATCC10864_004493-T1 ID=ATCC10864_004493-T1|Name=ATCC10864_004493-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6465bp|location=Sequence derived from alignment at MCQH01000074:134470..135985- (Aspergillus niger ATCC 10864)
ATGGCTCCGCCGTGATTTGCGTTTCCCGCGTCCACCTCCCAGAGCTCACC
GACTCCCAGGCTCTGGGCTCGCCCACTCAGGCCCTCAAGGAAAGCAATCC
CGTCTACAGGAAGGAAATTCCTGATCTCGAATCGCACACATCCGTCTTCC
CTTCTACCGCCACCACCTCCCCGCTCACGTCAAAGCCACCCACATCCAAG
GCGTCAGACCCGTGCAAGCCTCCTATCCCTACAGCATGGGATACCGATGC
ATCGGCCTCGTTCGCGCCGATCAAGCGCCACCGCGAGGGCGATTATCCCC
TTGACCTCACCGGGGGAGCCATATTTCACCAGGAGCCGTCAGCGGCAGCG
GCAGCAGCCGCGACAACAACCCTGGATGCCAATCCTTATTCAATGAAGTA
TTACCCACACAGCCAAGCACAGCAGTCCTTACCTGTAATGGGGCTCTCTG
GGGACCTCGGAAGCTGCACACATCCATACTACTTTAATTATTAGAACGTA
TTCGCCTGCTTGTCCATATCCTCTGCGAGCTGCGTGAAAGTCACGCTATC
TGCGTGGAGAAACTGAAGGAGGCCGACCAGTCTGTTCGGCGCCAAATTGC
CCCCGTCGAACGCATTCCCGTTCTCGATGAGATCTACCACGTACGAGAGG
AGGAGGAACGATACCTAGACGGTCGAACAGGTTCCACTCCACTACAGAAC
CCCCTCAATCCAAAAGGAAGCGGGTATCCCATGAATGCCTCGTCCCCATG
AGCATCACTTGTCACCAAAAGTCCATGCTGCCCGTGCGCAACACCGGCCT
TCTGCGCAGATACTATGAGAAAGCCTTCGACAGCCTGCAGCAGATTAACT
GTCGTATCCTCGCCAAAGCATACATTAAGCTCGTGGAACCCCGGAAGCAG
GTTAACTATCCATACAATGGACGCAAGATTATATCCGGCTCATCGCAGCA
ATTTGATCCTGAGCTGACCAAGCCAGCCTGGTGGCCGGCGGGTGTCACTC
ACCGCGAACCAGACCATCTTCTCAAAGCGGAAGACATCAGAGGGAGAAGC
CCACTCTCCCCAGAATCTCCCAGCGCCAGCGATCTATCAGCTAAACACAT
ATGGATGCGCCATTAGACGGGCTGGCTTGTATGCACTTCGCCCTCATTTA
TATAGACGACAATGGCAAATTACGCTTTGAGGCATCGCAATCAATCGCGA
ACAACTGCCAGACAATTCTCTCTCCCAGTGTGACGGAAAACTTTCTGCGT
GCGGTGGCACTGTCGGGCAAAGGTGATCCATCCAAAATGCTCGATGGCTC
CGCCGTGATTTGCGTTTCCCGCGTCCACCTCCCAGAGCTCACCGACTCCC
AGGCTCTGGGCTCGCCCACTCAGGCCCTCAAGGAAAGCAATCCCGTCTAC
AGGAAGGAAATTCCTGATCTCGAATCGCACACATCCGTCTTCCCTTCTAC
CGCCACCACCTCCCCGCTCACGTCAAAGCCACCCACATCCAAGGCGTCAG
ACCCGTGCAAGCCTCCTATCCCTACAGCATGGGATACCGATGCATCGGCC
TCGTTCGCGCCGATCAAGCGCCACCGCGAGGGCGATTATCCCCTTGACCT
CACCGGGGGAGCCATATTTCACCAGGAGCCGTCAGCGGCAGCGGCAGCAG
CCGCGACAACAACCCTGGATGCCAATCCTTATTCAATGAAGTATTACCCA
CACAGCCAAGCACAGCAGTCCTTACCTGTAATGGGGCTCTCTGGGGACCT
CGGAAGCTGCACACATCCATACTACTTTAATTATTAGAACGTATTCGCCT
GCTTGTCCATATCCTCTGCGAGCTGCGTGAAAGTCACGCTATCTGCGTGG
AGAAACTGAAGGAGGCCGACCAGTCTGTTCGGCGCCAAATTGCCCCCGTC
GAACGCATTCCCGTTCTCGATGAGATCTACCACGTACGAGAGGAGGAGGA
ACGATACCTAGACGGTCGAACAGGTTCCACTCCACTACAGAACCCCCTCA
ATCCAAAAGGAAGCGGGTATCCCATGAATGCCTCGTCCCCATGAGCATCA
CTTGTCACCAAAAGTCCATGCTGCCCGTGCGCAACACCGGCCTTCTGCGC
AGATACTATGAGAAAGCCTTCGACAGCCTGCAGCAGATTAACTGTCGTAT
CCTCGCCAAAGCATACATTAAGCTCGTGGAACCCCGGAAGCAGGTTAACT
ATCCATACAATGGACGCAAGATTATATCCGGCTCATCGCAGCAATTTGAT
CCTGAGCTGACCAAGCCAGCCTGGTGGCCGGCGGGTGTCACTCACCGCGA
ACCAGACCATCTTCTCAAAGCGGAAGACATCAGAGGGAGAAGCCCACTCT
CCCCAGAATCTCCCAGCGCCAGCGATCTATCAGCTAAACACATATGGATG
CGCCATTAGACGGGCTGGCTTGTATGCACTTCGCCCTCATTTATATAGAC
GACAATGGCAAATTACGCTTTGAGGCATCGCAATCAATCGCGAACAACTG
CCAGACAATTCTCTCTCCCAGTGTGACGGAAAACTTTCTGCGTGCGGTGG
CACTGTCGGGCAAAGGTGATCCATCCAAAATGCTCGATGGCTCCGCCGTG
ATTTGCGTTTCCCGCGTCCACCTCCCAGAGCTCACCGACTCCCAGGCTCT
GGGCTCGCCCACTCAGGCCCTCAAGGAAAGCAATCCCGTCTACAGGAAGG
AAATTCCTGATCTCGAATCGCACACATCCGTCTTCCCTTCTACCGCCACC
ACCTCCCCGCTCACGTCAAAGCCACCCACATCCAAGGCGTCAGACCCGTG
CAAGCCTCCTATCCCTACAGCATGGGATACCGATGCATCGGCCTCGTTCG
CGCCGATCAAGCGCCACCGCGAGGGCGATTATCCCCTTGACCTCACCGGG
GGAGCCATATTTCACCAGGAGCCGTCAGCGGCAGCGGCAGCAGCCGCGAC
AACAACCCTGGATGCCAATCCTTATTCAATGAAGTATTACCCACACAGCC
AAGCACAGCAGTCCTTACCTGTAATGGGGCTCTCTGGGGACCTCGGAAGC
TGCACACATCCATACTACTTTAATTATTAGAACGTATTCGCCTGCTTGTC
CATATCCTCTGCGAGCTGCGTGAAAGTCACGCTATCTGCGTGGAGAAACT
GAAGGAGGCCGACCAGTCTGTTCGGCGCCAAATTGCCCCCGTCGAACGCA
TTCCCGTTCTCGATGAGATCTACCACGTACGAGAGGAGGAGGAACGATAC
CTAGACGGTCGAACAGGTTCCACTCCACTACAGAACCCCCTCAATCCAAA
AGGAAGCGGGTATCCCATGAATGCCTCGTCCCCATGAGCATCACTTGTCA
CCAAAAGTCCATGCTGCCCGTGCGCAACACCGGCCTTCTGCGCAGATACT
ATGAGAAAGCCTTCGACAGCCTGCAGCAGATTAACTGTCGTATCCTCGCC
AAAGCATACATTAAGCTCGTGGAACCCCGGAAGCAGGTTAACTATCCATA
CAATGGACGCAAGATTATATCCGGCTCATCGCAGCAATTTGATCCTGAGC
TGACCAAGCCAGCCTGGTGGCCGGCGGGTGTCACTCACCGCGAACCAGAC
CATCTTCTCAAAGCGGAAGACATCAGAGGGAGAAGCCCACTCTCCCCAGA
ATCTCCCAGCGCCAGCGATCTATCAGCTAAACACATATGGATGCGCCATT
AGACGGGCTGGCTTGTATGCACTTCGCCCTCATTTATATAGACGACAATG
GCAAATTACGCTTTGAGGCATCGCAATCAATCGCGAACAACTGCCAGACA
ATTCTCTCTCCCAGTGTGACGGAAAACTTTCTGCGTGCGGTGGCACTGTC
GGGCAAAGGTGATCCATCCAAAATGCTCGATGGCTCCGCCGTGATTTGCG
TTTCCCGCGTCCACCTCCCAGAGCTCACCGACTCCCAGGCTCTGGGCTCG
CCCACTCAGGCCCTCAAGGAAAGCAATCCCGTCTACAGGAAGGAAATTCC
TGATCTCGAATCGCACACATCCGTCTTCCCTTCTACCGCCACCACCTCCC
CGCTCACGTCAAAGCCACCCACATCCAAGGCGTCAGACCCGTGCAAGCCT
CCTATCCCTACAGCATGGGATACCGATGCATCGGCCTCGTTCGCGCCGAT
CAAGCGCCACCGCGAGGGCGATTATCCCCTTGACCTCACCGGGGGAGCCA
TATTTCACCAGGAGCCGTCAGCGGCAGCGGCAGCAGCCGCGACAACAACC
CTGGATGCCAATCCTTATTCAATGAAGTATTACCCACACAGCCAAGCACA
GCAGTCCTTACCTGTAATGGGGCTCTCTGGGGACCTCGGAAGCTGCACAC
ATCCATACTACTTTAATTATTAGAACGTATTCGCCTGCTTGTCCATATCC
TCTGCGAGCTGCGTGAAAGTCACGCTATCTGCGTGGAGAAACTGAAGGAG
GCCGACCAGTCTGTTCGGCGCCAAATTGCCCCCGTCGAACGCATTCCCGT
TCTCGATGAGATCTACCACGTACGAGAGGAGGAGGAACGATACCTAGACG
GTCGAACAGGTTCCACTCCACTACAGAACCCCCTCAATCCAAAAGGAAGC
GGGTATCCCATGAATGCCTCGTCCCCATGAGCATCACTTGTCACCAAAAG
TCCATGCTGCCCGTGCGCAACACCGGCCTTCTGCGCAGATACTATGAGAA
AGCCTTCGACAGCCTGCAGCAGATTAACTGTCGTATCCTCGCCAAAGCAT
ACATTAAGCTCGTGGAACCCCGGAAGCAGGTTAACTATCCATACAATGGA
CGCAAGATTATATCCGGCTCATCGCAGCAATTTGATCCTGAGCTGACCAA
GCCAGCCTGGTGGCCGGCGGGTGTCACTCACCGCGAACCAGACCATCTTC
TCAAAGCGGAAGACATCAGAGGGAGAAGCCCACTCTCCCCAGAATCTCCC
AGCGCCAGCGATCTATCAGCTAAACACATATGGATGCGCCATTAGACGGG
CTGGCTTGTATGCACTTCGCCCTCATTTATATAGACGACAATGGCAAATT
ACGCTTTGAGGCATCGCAATCAATCGCGAACAACTGCCAGACAATTCTCT
CTCCCAGTGTGACGGAAAACTTTCTGCGTGCGGTGGCACTGTCGGGCAAA
GGTGATCCATCCAAAATGCTCGATGGCTCCGCCGTGATTTGCGTTTCCCG
CGTCCACCTCCCAGAGCTCACCGACTCCCAGGCTCTGGGCTCGCCCACTC
AGGCCCTCAAGGAAAGCAATCCCGTCTACAGGAAGGAAATTCCTGATCTC
GAATCGCACACATCCGTCTTCCCTTCTACCGCCACCACCTCCCCGCTCAC
GTCAAAGCCACCCACATCCAAGGCGTCAGACCCGTGCAAGCCTCCTATCC
CTACAGCATGGGATACCGATGCATCGGCCTCGTTCGCGCCGATCAAGCGC
CACCGCGAGGGCGATTATCCCCTTGACCTCACCGGGGGAGCCATATTTCA
CCAGGAGCCGTCAGCGGCAGCGGCAGCAGCCGCGACAACAACCCTGGATG
CCAATCCTTATTCAATGAAGTATTACCCACACAGCCAAGCACAGCAGTCC
TTACCTGTAATGGGGCTCTCTGGGGACCTCGGAAGCTGCACACATCCATA
CTACTTTAATTATTAGAACGTATTCGCCTGCTTGTCCATATCCTCTGCGA
GCTGCGTGAAAGTCACGCTATCTGCGTGGAGAAACTGAAGGAGGCCGACC
AGTCTGTTCGGCGCCAAATTGCCCCCGTCGAACGCATTCCCGTTCTCGAT
GAGATCTACCACGTACGAGAGGAGGAGGAACGATACCTAGACGGTCGAAC
AGGTTCCACTCCACTACAGAACCCCCTCAATCCAAAAGGAAGCGGGTATC
CCATGAATGCCTCGTCCCCATGAGCATCACTTGTCACCAAAAGTCCATGC
TGCCCGTGCGCAACACCGGCCTTCTGCGCAGATACTATGAGAAAGCCTTC
GACAGCCTGCAGCAGATTAACTGTCGTATCCTCGCCAAAGCATACATTAA
GCTCGTGGAACCCCGGAAGCAGGTTAACTATCCATACAATGGACGCAAGA
TTATATCCGGCTCATCGCAGCAATTTGATCCTGAGCTGACCAAGCCAGCC
TGGTGGCCGGCGGGTGTCACTCACCGCGAACCAGACCATCTTCTCAAAGC
GGAAGACATCAGAGGGAGAAGCCCACTCTCCCCAGAATCTCCCAGCGCCA
GCGATCTATCAGCTAAACACATATGGATGCGCCATTAGACGGGCTGGCTT
GTATGCACTTCGCCCTCATTTATATAGACGACAATGGCAAATTACGCTTT
GAGGCATCGCAATCAATCGCGAACAACTGCCAGACAATTCTCTCTCCCAG
TGTGACGGAAAACTTTCTGCGTGCGGTGGCACTGTCGGGCAAAGGTGATC
CATCCAAAATGCTCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004493ATCC10864_004493Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004493-T1ATCC10864_004493-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004493-T1.cdsATCC10864_004493-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004493-T1.exon5ATCC10864_004493-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004493-T1.exon4ATCC10864_004493-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004493-T1.exon3ATCC10864_004493-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004493-T1.exon2ATCC10864_004493-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004493-T1.exon1ATCC10864_004493-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR021264
PFAMPF11001
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:134470..135985 -
Powered by Drupal