You are here

ATCC10864_004521-T1, ATCC10864_004521-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004521-T1
Unique NameATCC10864_004521-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:212236..213711-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004521-T1 ID=ATCC10864_004521-T1|Name=ATCC10864_004521-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1476bp|location=Sequence derived from alignment at MCQH01000074:212236..213711- (Aspergillus niger ATCC 10864)
ATGGCTGATGATACCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGT GAAGTCATCCAATGATGCTAAATATACACTCACTCTGCCATCATCAACCT CGGTCTCTGATCTGAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACC CCAGCTGAGCGCCAGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAA TGAAACCCTGGCAACGTACAACATCAAGGATGGACACACTATTCACCTGG TGAAGAGTGCACCCAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACG TCAACATCCGCACCTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGT CCCCACGAATCTCGCTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGA CGGGAGCCAGATATGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTC GGGCCTGATGGCGGGGTAAGTCGTTTGCCTTGATGTTGTCCTGACAGGCT TCTTGTGTCATCGACAAACCAACTAATACGCTGTTTCTAGATGGGCCCTC CTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCCTCAATTTCAG TCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTGACATGATGAT CCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTACGGCAGATGA TGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAACTCGATACGT CAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCCTTGGTGGAGG CGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAGGAAAACAGAG ACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGCCGCGTTCAAC CCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCGCAGCCCTTTT TGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCGACTCCGTCGG GCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCACCGAGCGAGCC GCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGCAGGGCTTCCA GAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGCGGCCAAGGCG GTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCCTTTCCTCCGG GACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTGCCGCACCGGG AGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTGTTTGGTGGTG GATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGAGGAACGGTAT GCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCGAGTTTGAGAG GAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCAAGGGGCAGTGG AGTATCTATTGAGCCACCCCTCTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000074:212236..213711-

>ATCC10864_004521-T1 ID=ATCC10864_004521-T1|Name=ATCC10864_004521-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2802bp|location=Sequence derived from alignment at MCQH01000074:212236..213711- (Aspergillus niger ATCC 10864)
ATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACCC
TCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATTG
ACATGATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGTA
CGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCAA
CTCGATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGCC
TTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGAG
GAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCGC
CGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTCG
CAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGCG
ACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCAC
CGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAGC
AGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGGC
GGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATCC
TTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGTG
CCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACTG
TTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCGA
GGAACGGTATGCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTCG
AGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCAA
GGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAAATGGCTGATGATAC
CGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAATG
ATGCTAAATATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCTG
AAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCCA
GCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCAA
CGTACAACATCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACCC
AGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCACC
TGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTCG
CTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATAT
GCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCGG
GATGGGCCCTCCTCCTGACACGGAAACCATGCTCAACATGCTCGAAAACC
CTCAATTTCAGTCTACGATCAACGAAGCTCTGCAAAACCCCGCCATGATT
GACATGATGATCCAACAGAACCCCATGCTGCGCGAAATGGGTCCTGGCGT
ACGGCAGATGATGCAGAGCCCGGAATTCCGCCGCATGCTCACCGACCCCA
ACTCGATACGTCAGATGGTACAGATGCAGAGAGCCATGGGTGGCGGGGGC
CTTGGTGGAGGCGCATTTCCCGCTCCTGGGGTTACCAACACAACACCCGA
GGAAAACAGAGACGCTCAGAACAATACCGGTACCACGCCCACTCCTGGCG
CCGCGTTCAACCCTTTTATGCCGGCCGGTCTCGGCGCTGGAAATCCTTTC
GCAGCCCTTTTTGGAGGCAATCCCATGATGGGCAACCCTGCTGCAGGAGC
GACTCCGTCGGGCGCTTCACCCACCGCTGGCGGAACTCAACCGGACAGCA
CCGAGCGAGCCGCTGGGGGTGATAACGCTACGGGACAAGGACAGAACCAG
CAGGGCTTCCAGAATCCGTTCAGCATGTTCATGAACCCAGCGCTCTTTGG
CGGCCAAGGCGGTCAGGCTGGTGCGAACCCTTTCAATCCGCAACAGAATC
CTTTCCTCCGGGACCCAGCACTGCTGCAACAATGGATGCAGAACCTAGGT
GCCGCACCGGGAGAAGGAGGCGCGGCTGGTACCAATCCTCTGGCGGCACT
GTTTGGTGGTGGATTTGGCAGCCCCCCTCCGCAAGATAACCGGCCCCCCG
AGGAACGGTATGCAGAGCAGCTTCGTCAATTGAACGACATGGGATTTTTC
GAGTTTGAGAGGAATATCGAGGCTCTTCGCCGAGCAGGAGGCAGCGTGCA
AGGGGCAGTGGAGTATCTATTGAGCCACCCCTCTTAAATGGCTGATGATA
CCGCCGCGGCCGAGGATGCGCACATCACTTTCAACGTGAAGTCATCCAAT
GATGCTAAATATACACTCACTCTGCCATCATCAACCTCGGTCTCTGATCT
GAAAGAGAAGCTAGCGTCTTCGGAATATGCTGATACCCCAGCTGAGCGCC
AGCGTCTGATCTACTCGGGCAGAGTCCTCAAAGACAATGAAACCCTGGCA
ACGTACAACATCAAGGATGGACACACTATTCACCTGGTGAAGAGTGCACC
CAGCAACCGGCCCCCTAGTGGTGCTGCGACGACGACGTCAACATCCGCAC
CTGGTGGTGCGGCTGCAACTCCTGCGGCTGCAGGCGTCCCCACGAATCTC
GCTGCCGGCACGGGCAATAACCCGCTCGCGGGGTTGACGGGAGCCAGATA
TGCCGGGTTCGCGCAACTGCCAGGTGCAGGAATGTTCGGGCCTGATGGCG
GG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004521ATCC10864_004521Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004521-T1ATCC10864_004521-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004521-T1.cdsATCC10864_004521-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004521-T1.exon2ATCC10864_004521-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004521-T1.exon1ATCC10864_004521-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009060
PFAMPF00627
PFAMPF11976
InterProIPR000626
InterProIPR029071
InterProIPR015940
PFAMPF00240
InterProIPR006636
PFAMPF13881
Properties
Property NameValue
NoteBUSCO:EOG09264JQ1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:212236..213711 -