You are here

Home

ATCC10864_004547-T1, ATCC10864_004547-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004547-T1
Unique NameATCC10864_004547-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:288115..289224+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004547-T1 ID=ATCC10864_004547-T1|Name=ATCC10864_004547-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1110bp|location=Sequence derived from alignment at MCQH01000074:288115..289224+ (Aspergillus niger ATCC 10864)
ATGTGCTCCAAACTTTTTCAGCCTCTTCAGATCGGCAAAGCCAATCTTGA
GCACCGAGTAGTCATGGCACCACTCACTCGATTCCGCGCGGACTCGCAAC
ATGTCCCTCTTCCCATGGCAACAACATACTATGAGCAACGTGCTTCCGTT
CCGGGCACCCTGCTCATCGCAGAAGCAACACTGATCTCACCCTCAGCTGG
CGGAGTTCCTCATGCGCCTGGGGTGTGGAGCGAAGAACAGGTTCACGGCT
GGAAAAAGATTACTGAAGCGGTGCATAAGAAAGGGAGCTTTATTTTCTGT
CAACTAATTGCTGCTGGCAGAGCTGCTGACCCAGCCCAGTTGCATGCAGA
AGGTGGTTTTATGCTGCATGCTCCTAGTCCGATTCCTATTGAGCCGGGGA
TGCCGGTACCCAAGGAGCTGGATGAAATCGAAGTGCAGGAAATCATCAAT
GACTTCGCAATGGCTGCGAAGAACGCTATTCGTGCTGGTTTTGACGGCGT
TGAGATCCACGGAGCTAATGGGTACTTGGTCGACCAGTTCCTCCAAGACG
TTTCTAATAAGAGAAACGATAAATGGGGTGGTAGCATCCCCAACAGAGCA
AGATTCGGCTTGGAGGTCGCCAAAGCAGTGGCCGATGCTATCGGCGCTGA
CCGACTTGGCTTTCGCCTCAGTCCGTGGAACACATGGCAGAGCATGAAGA
TGGTCGACCCTGTGCCTCAATTTACCTACTTCGTGGAGCGCCTGCAACAG
CTCGGACTGGCCTACCTCCACGTGATTGAGTCTCGCGTCATCAATAACGT
GGACTGCGAAAAGGAGGGCAGTATCAAGTTCCTACTCGACGTTTGGGGGA
AATCAGCGCCTGTGATTGTTGCCGGCGGATATAGACCAGAGAATGTAGAA
AATGCTTTGGAGGAAGAATACAAGGACTACAAGGTTGCAGTCGCCTTCGG
TCGTCATTTTATCGCCAATCCCGACTTGCCATTTCGCATTCGTCATGACG
TTCATCTTAACCCTTACGACCGAGAGAGTTTCTATACGCCTTTGCAAGAG
AATGGCTACACAGATTATCCCTTCAGTGCGGAATTTATTGAAAGCAAAAC
TAAATGCTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000074:288115..289224+

>ATCC10864_004547-T1 ID=ATCC10864_004547-T1|Name=ATCC10864_004547-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1110bp|location=Sequence derived from alignment at MCQH01000074:288115..289224+ (Aspergillus niger ATCC 10864)
ATGTGCTCCAAACTTTTTCAGCCTCTTCAGATCGGCAAAGCCAATCTTGA
GCACCGAGTAGTCATGGCACCACTCACTCGATTCCGCGCGGACTCGCAAC
ATGTCCCTCTTCCCATGGCAACAACATACTATGAGCAACGTGCTTCCGTT
CCGGGCACCCTGCTCATCGCAGAAGCAACACTGATCTCACCCTCAGCTGG
CGGAGTTCCTCATGCGCCTGGGGTGTGGAGCGAAGAACAGGTTCACGGCT
GGAAAAAGATTACTGAAGCGGTGCATAAGAAAGGGAGCTTTATTTTCTGT
CAACTAATTGCTGCTGGCAGAGCTGCTGACCCAGCCCAGTTGCATGCAGA
AGGTGGTTTTATGCTGCATGCTCCTAGTCCGATTCCTATTGAGCCGGGGA
TGCCGGTACCCAAGGAGCTGGATGAAATCGAAGTGCAGGAAATCATCAAT
GACTTCGCAATGGCTGCGAAGAACGCTATTCGTGCTGGTTTTGACGGCGT
TGAGATCCACGGAGCTAATGGGTACTTGGTCGACCAGTTCCTCCAAGACG
TTTCTAATAAGAGAAACGATAAATGGGGTGGTAGCATCCCCAACAGAGCA
AGATTCGGCTTGGAGGTCGCCAAAGCAGTGGCCGATGCTATCGGCGCTGA
CCGACTTGGCTTTCGCCTCAGTCCGTGGAACACATGGCAGAGCATGAAGA
TGGTCGACCCTGTGCCTCAATTTACCTACTTCGTGGAGCGCCTGCAACAG
CTCGGACTGGCCTACCTCCACGTGATTGAGTCTCGCGTCATCAATAACGT
GGACTGCGAAAAGGAGGGCAGTATCAAGTTCCTACTCGACGTTTGGGGGA
AATCAGCGCCTGTGATTGTTGCCGGCGGATATAGACCAGAGAATGTAGAA
AATGCTTTGGAGGAAGAATACAAGGACTACAAGGTTGCAGTCGCCTTCGG
TCGTCATTTTATCGCCAATCCCGACTTGCCATTTCGCATTCGTCATGACG
TTCATCTTAACCCTTACGACCGAGAGAGTTTCTATACGCCTTTGCAAGAG
AATGGCTACACAGATTATCCCTTCAGTGCGGAATTTATTGAAAGCAAAAC
TAAATGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0010181FMN binding
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004547ATCC10864_004547Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004547-T1.exon1ATCC10864_004547-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004547-T1.cdsATCC10864_004547-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004547-T1ATCC10864_004547-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00724
InterProIPR001155
InterProIPR013785
Properties
Property NameValue
NoteSMCOG1217:NADH:flavin oxidoreductase/NADH oxidase
NoteantiSMASH:Cluster_1000074.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:288115..289224 +
Powered by Drupal