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ATCC10864_004549-T1, ATCC10864_004549-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004549-T1
Unique NameATCC10864_004549-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:292509..294213+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004549-T1 ID=ATCC10864_004549-T1|Name=ATCC10864_004549-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1705bp|location=Sequence derived from alignment at MCQH01000074:292509..294213+ (Aspergillus niger ATCC 10864)
ATGAGAAATCAAGACATCGTTGGTGAGGCCCTGGCCTCTGTCCTTCCTCA
ATATGGTCGCCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCTCA
TTCTGCTCGTTCCGTTACTATCATCGTCAGTGGCTGGATATGATGGTAAG
TCTATGGATCTGCATTTGGGATGGAACTCTCTCACGCTTTCTTTTTTGCT
GGTAGGCTCTCTTATGAATGCTCTACAGTCCATCGCTGAGTGGAACGACT
ATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCAG
TCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACAG
AATTGGAAGACGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATCG
CCTCTATTATTCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTCA
CGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCAT
GTTGATCACTGAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGCG
CTTTCTGGACCATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTCA
TATGGAACTCAAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTCC
ATCAATACTTCAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGGG
CTGTTCCGGAGTCACCACGGTTGTTCTCCCTCAACCCTTGACTTTCGCGT
ACTAACAGCCATATAGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCT
GAAGAATTACTTGCCCGATTCCATACTGCCGGGGACACTTCGCACCCTCT
GATACAATTCGAAATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTC
AAGCCGCGGAGACCAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGC
AAGCGCACATTTATCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGT
AAGTATATCTAGACCTCATTTCCCTTTAGCAGGAAAAATAACCACTTAAT
ACAGGGCGTTGCGGTCGTATCTTACTATCTCACACTCGTTCTCGACACGG
TCGGTATCAAAGATCCAAGCACTCAGACAATGATCAATGGCCTGCTGCAA
GTATTTAACTTCATTGCAGCTGGCAGTGCTGCTATGTTGGTTGACCGATT
GGGTCGTCGTACCCTGTTTCTTTGGTCGGCTTCGGGAATGCTTCTTTCCT
TCATAATATGGACTGCCTGCTCAGCTGTCTTTGACAGCACTCAGGGCAAG
CCCCTTGGTAATACGGTGATTGCATTTGTCTTCATTTTCTTCTTCCATTA
CGACATCGCCTATACACCGTTACTATTGGGCTATCCAACTGAGATCTTTC
CGTATTCCATACGAAGCAAGGGACTGACTGTTGAGCTATTAAGTGTATAC
GGCTCCCTTATTATACTGGCATTCGTCAACCCGATTGCTCTCGATAGTAT
CGGCTGGCATTACTACATATTTTTCTGTTGTTTTGATGTAGTGGTATTGG
CAGTAACTTGGCTCGCCTTTCCCGAGACGAAGAGCCATTCACTTGAAGAG
ATTGCCGAAGTATTTGACGGGCCATTACCTGCTACGAGCGGGATTGTTTT
TGCCAAGGATGACGATGCGGTCGGGAAATGTGAACATACTGAGCATGCGG
CATAA
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Coding sequence (CDS) from alignment at MCQH01000074:292509..294213+

>ATCC10864_004549-T1 ID=ATCC10864_004549-T1|Name=ATCC10864_004549-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6168bp|location=Sequence derived from alignment at MCQH01000074:292509..294213+ (Aspergillus niger ATCC 10864)
ATGAGAAATCAAGACATCGTTGGTGAGGCCCTGGCCTCTGTCCTTCCTCA
ATATGGTCGCCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCTCA
TTCTGCTCGTTCCGTTACTATCATCGTCAGTGGCTGGATATGATGGCTCT
CTTATGAATGCTCTACAGTCCATCGCTGAGTGGAACGACTATTTCGGCAA
CCCCTCTGGCTCGGTTTTGGGAGTTGTAAATGCGGCCCAGTCTATCGGGA
GCGTCATCTCGTTGCCCTTTGTCGCTGTCTTGTCGGACAGAATTGGAAGA
CGCCTAACCTTGCTTTCCGGTGCAATCGTGATCATCATCGCCTCTATTAT
TCAAGCAGCGTCAGTTCATTATGGCATGTTTGTATTTTCACGTGTGTTGG
TTGGCGTCGGCTCGATGCTGGTCGTGCAGCCGTCGCCCATGTTGATCACT
GAACTGGCGTATCCAACTCACCGAGGGAAGTACACCAGCGCTTTCTGGAC
CATGTACTATCTTGGAGCTATTCTGGCCTCATGGGCCTCATATGGAACTC
AAATGCACCTCAATAAATCCAGTTGGAGCTGGAGAGTTCCATCAATACTT
CAAGCTGGATTTCCGATCGTTCAGGTTCTCTTCTGGTGGGCTGTTCCGGA
GTCACCACGGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAAT
TACTTGCCCGATTCCATACTGCCGGGGACACTTCGCACCCTCTGATACAA
TTCGAAATGGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCGC
GGAGACCAAATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGCA
CATTTATCGCAGTCAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGCG
GTCGTATCTTACTATCTCACACTCGTTCTCGACACGGTCGGTATCAAAGA
TCCAAGCACTCAGACAATGATCAATGGCCTGCTGCAAGTATTTAACTTCA
TTGCAGCTGGCAGTGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTACC
CTGTTTCTTTGGTCGGCTTCGGGAATGCTTCTTTCCTTCATAATATGGAC
TGCCTGCTCAGCTGTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAATA
CGGTGATTGCATTTGTCTTCATTTTCTTCTTCCATTACGACATCGCCTAT
ACACCGTTACTATTGGGCTATCCAACTGAGATCTTTCCGTATTCCATACG
AAGCAAGGGACTGACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATTA
TACTGGCATTCGTCAACCCGATTGCTCTCGATAGTATCGGCTGGCATTAC
TACATATTTTTCTGTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGCT
CGCCTTTCCCGAGACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTAT
TTGACGGGCCATTACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGAC
GATGCGGTCGGGAAATGTGAACATACTGAGCATGCGGCATAAATGAGAAA
TCAAGACATCGTTGGTGAGGCCCTGGCCTCTGTCCTTCCTCAATATGGTC
GCCCTTGGTATCGGGTATCTCATTTACTACATCTCAATCTCATTCTGCTC
GTTCCGTTACTATCATCGTCAGTGGCTGGATATGATGGCTCTCTTATGAA
TGCTCTACAGTCCATCGCTGAGTGGAACGACTATTTCGGCAACCCCTCTG
GCTCGGTTTTGGGAGTTGTAAATGCGGCCCAGTCTATCGGGAGCGTCATC
TCGTTGCCCTTTGTCGCTGTCTTGTCGGACAGAATTGGAAGACGCCTAAC
CTTGCTTTCCGGTGCAATCGTGATCATCATCGCCTCTATTATTCAAGCAG
CGTCAGTTCATTATGGCATGTTTGTATTTTCACGTGTGTTGGTTGGCGTC
GGCTCGATGCTGGTCGTGCAGCCGTCGCCCATGTTGATCACTGAACTGGC
GTATCCAACTCACCGAGGGAAGTACACCAGCGCTTTCTGGACCATGTACT
ATCTTGGAGCTATTCTGGCCTCATGGGCCTCATATGGAACTCAAATGCAC
CTCAATAAATCCAGTTGGAGCTGGAGAGTTCCATCAATACTTCAAGCTGG
ATTTCCGATCGTTCAGGTTCTCTTCTGGTGGGCTGTTCCGGAGTCACCAC
GGTGGTTAATCGCCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTGCC
CGATTCCATACTGCCGGGGACACTTCGCACCCTCTGATACAATTCGAAAT
GGCTGAGATCGGGCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGACCA
AATGGACAACGTTGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTATC
GCAGTCAGCATTGGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTATC
TTACTATCTCACACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAGCA
CTCAGACAATGATCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAGCT
GGCAGTGCTGCTATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTTCT
TTGGTCGGCTTCGGGAATGCTTCTTTCCTTCATAATATGGACTGCCTGCT
CAGCTGTCTTTGACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGATT
GCATTTGTCTTCATTTTCTTCTTCCATTACGACATCGCCTATACACCGTT
ACTATTGGGCTATCCAACTGAGATCTTTCCGTATTCCATACGAAGCAAGG
GACTGACTGTTGAGCTATTAAGTGTATACGGCTCCCTTATTATACTGGCA
TTCGTCAACCCGATTGCTCTCGATAGTATCGGCTGGCATTACTACATATT
TTTCTGTTGTTTTGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTTTC
CCGAGACGAAGAGCCATTCACTTGAAGAGATTGCCGAAGTATTTGACGGG
CCATTACCTGCTACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCGGT
CGGGAAATGTGAACATACTGAGCATGCGGCATAAATGAGAAATCAAGACA
TCGTTGGTGAGGCCCTGGCCTCTGTCCTTCCTCAATATGGTCGCCCTTGG
TATCGGGTATCTCATTTACTACATCTCAATCTCATTCTGCTCGTTCCGTT
ACTATCATCGTCAGTGGCTGGATATGATGGCTCTCTTATGAATGCTCTAC
AGTCCATCGCTGAGTGGAACGACTATTTCGGCAACCCCTCTGGCTCGGTT
TTGGGAGTTGTAAATGCGGCCCAGTCTATCGGGAGCGTCATCTCGTTGCC
CTTTGTCGCTGTCTTGTCGGACAGAATTGGAAGACGCCTAACCTTGCTTT
CCGGTGCAATCGTGATCATCATCGCCTCTATTATTCAAGCAGCGTCAGTT
CATTATGGCATGTTTGTATTTTCACGTGTGTTGGTTGGCGTCGGCTCGAT
GCTGGTCGTGCAGCCGTCGCCCATGTTGATCACTGAACTGGCGTATCCAA
CTCACCGAGGGAAGTACACCAGCGCTTTCTGGACCATGTACTATCTTGGA
GCTATTCTGGCCTCATGGGCCTCATATGGAACTCAAATGCACCTCAATAA
ATCCAGTTGGAGCTGGAGAGTTCCATCAATACTTCAAGCTGGATTTCCGA
TCGTTCAGGTTCTCTTCTGGTGGGCTGTTCCGGAGTCACCACGGTGGTTA
ATCGCCAATGGACAGCCGGAAGAGGCTGAAGAATTACTTGCCCGATTCCA
TACTGCCGGGGACACTTCGCACCCTCTGATACAATTCGAAATGGCTGAGA
TCGGGCGTACTATCGAAATGGAGAGTCAAGCCGCGGAGACCAAATGGACA
ACGTTGGTTAAGACTCCTGGAAACCGCAAGCGCACATTTATCGCAGTCAG
CATTGGTGCCTTTGCACAATGGAACGGCGTTGCGGTCGTATCTTACTATC
TCACACTCGTTCTCGACACGGTCGGTATCAAAGATCCAAGCACTCAGACA
ATGATCAATGGCCTGCTGCAAGTATTTAACTTCATTGCAGCTGGCAGTGC
TGCTATGTTGGTTGACCGATTGGGTCGTCGTACCCTGTTTCTTTGGTCGG
CTTCGGGAATGCTTCTTTCCTTCATAATATGGACTGCCTGCTCAGCTGTC
TTTGACAGCACTCAGGGCAAGCCCCTTGGTAATACGGTGATTGCATTTGT
CTTCATTTTCTTCTTCCATTACGACATCGCCTATACACCGTTACTATTGG
GCTATCCAACTGAGATCTTTCCGTATTCCATACGAAGCAAGGGACTGACT
GTTGAGCTATTAAGTGTATACGGCTCCCTTATTATACTGGCATTCGTCAA
CCCGATTGCTCTCGATAGTATCGGCTGGCATTACTACATATTTTTCTGTT
GTTTTGATGTAGTGGTATTGGCAGTAACTTGGCTCGCCTTTCCCGAGACG
AAGAGCCATTCACTTGAAGAGATTGCCGAAGTATTTGACGGGCCATTACC
TGCTACGAGCGGGATTGTTTTTGCCAAGGATGACGATGCGGTCGGGAAAT
GTGAACATACTGAGCATGCGGCATAAATGAGAAATCAAGACATCGTTGGT
GAGGCCCTGGCCTCTGTCCTTCCTCAATATGGTCGCCCTTGGTATCGGGT
ATCTCATTTACTACATCTCAATCTCATTCTGCTCGTTCCGTTACTATCAT
CGTCAGTGGCTGGATATGATGGCTCTCTTATGAATGCTCTACAGTCCATC
GCTGAGTGGAACGACTATTTCGGCAACCCCTCTGGCTCGGTTTTGGGAGT
TGTAAATGCGGCCCAGTCTATCGGGAGCGTCATCTCGTTGCCCTTTGTCG
CTGTCTTGTCGGACAGAATTGGAAGACGCCTAACCTTGCTTTCCGGTGCA
ATCGTGATCATCATCGCCTCTATTATTCAAGCAGCGTCAGTTCATTATGG
CATGTTTGTATTTTCACGTGTGTTGGTTGGCGTCGGCTCGATGCTGGTCG
TGCAGCCGTCGCCCATGTTGATCACTGAACTGGCGTATCCAACTCACCGA
GGGAAGTACACCAGCGCTTTCTGGACCATGTACTATCTTGGAGCTATTCT
GGCCTCATGGGCCTCATATGGAACTCAAATGCACCTCAATAAATCCAGTT
GGAGCTGGAGAGTTCCATCAATACTTCAAGCTGGATTTCCGATCGTTCAG
GTTCTCTTCTGGTGGGCTGTTCCGGAGTCACCACGGTGGTTAATCGCCAA
TGGACAGCCGGAAGAGGCTGAAGAATTACTTGCCCGATTCCATACTGCCG
GGGACACTTCGCACCCTCTGATACAATTCGAAATGGCTGAGATCGGGCGT
ACTATCGAAATGGAGAGTCAAGCCGCGGAGACCAAATGGACAACGTTGGT
TAAGACTCCTGGAAACCGCAAGCGCACATTTATCGCAGTCAGCATTGGTG
CCTTTGCACAATGGAACGGCGTTGCGGTCGTATCTTACTATCTCACACTC
GTTCTCGACACGGTCGGTATCAAAGATCCAAGCACTCAGACAATGATCAA
TGGCCTGCTGCAAGTATTTAACTTCATTGCAGCTGGCAGTGCTGCTATGT
TGGTTGACCGATTGGGTCGTCGTACCCTGTTTCTTTGGTCGGCTTCGGGA
ATGCTTCTTTCCTTCATAATATGGACTGCCTGCTCAGCTGTCTTTGACAG
CACTCAGGGCAAGCCCCTTGGTAATACGGTGATTGCATTTGTCTTCATTT
TCTTCTTCCATTACGACATCGCCTATACACCGTTACTATTGGGCTATCCA
ACTGAGATCTTTCCGTATTCCATACGAAGCAAGGGACTGACTGTTGAGCT
ATTAAGTGTATACGGCTCCCTTATTATACTGGCATTCGTCAACCCGATTG
CTCTCGATAGTATCGGCTGGCATTACTACATATTTTTCTGTTGTTTTGAT
GTAGTGGTATTGGCAGTAACTTGGCTCGCCTTTCCCGAGACGAAGAGCCA
TTCACTTGAAGAGATTGCCGAAGTATTTGACGGGCCATTACCTGCTACGA
GCGGGATTGTTTTTGCCAAGGATGACGATGCGGTCGGGAAATGTGAACAT
ACTGAGCATGCGGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004549ATCC10864_004549Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004549-T1.exon1ATCC10864_004549-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004549-T1.exon2ATCC10864_004549-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004549-T1.exon3ATCC10864_004549-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004549-T1.exon4ATCC10864_004549-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004549-T1.cdsATCC10864_004549-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004549-T1ATCC10864_004549-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
PFAMPF00083
InterProIPR020846
InterProIPR005828
InterProIPR003663
InterProIPR005829
Properties
Property NameValue
NoteSMCOG1169:sugar transport protein
NoteantiSMASH:Cluster_1000074.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:292509..294213 +
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