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ATCC10864_004564-T1, ATCC10864_004564-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004564-T1
Unique NameATCC10864_004564-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:334987..336461-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004564-T1 ID=ATCC10864_004564-T1|Name=ATCC10864_004564-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1475bp|location=Sequence derived from alignment at MCQH01000074:334987..336461- (Aspergillus niger ATCC 10864)
ATGACTGCCGCAAGACGAAAACGTTTACTCAATAAGGTTCAGAATTATCC
AAAAAGAAGAAAGAATGGACCTGATCCGTTCACCATATTAAATGATGATG
GCGGAACATGGTAAGTAGTATTATTCTCCTTCCCAGTTTTTCCTTATAAT
AGTCCTTTTGAGACACTCGTAACAGGACTAATAATAAAGGCAGTGAATCT
CCAATCGTCCCAGATCCTCATGAAACAATCAGAAATGACACCACCACACA
ACCAGATATTATAGACTCAATATCTTCCAACAAGGTCGAAGACATACTGC
GACTCGACCTCGGAACTAAAAAAAGATTATCTCGCACTGAGGCCTTCGGT
GCGTTTCTCAACGCGGCTCTATCTGACAAGACCTTCTCAACCAGAAGATC
GCGCCCAAGGCAACCACGATTTCCAGGTGTCACCGAGAATACATCCATGA
CAAACCTCAAACGTGCAACGGAGTGTCTGAGCACGCTTGCGCAGACATTT
AGCTCAGCCCAACAAATAGACTTCGACTTTGAGAGGCTAACAAAAGAGGC
CCCAACTAACAGAAATAATAGAAAAGGAAAATCACAATAGTCACCTCTTC
ATTTTGCAGCTCAGAGAGATAGTGCCAGATTATGTCAAGCGCTTTTGGAC
AAGGACGCATTTATAGACGCCAGGGAAGACGACTCCTGGACACCCCTGAT
GCTAGCGGCTCAGAACGGTCATTATAATGCATGCTGTACCCTAATCAAGC
GCGGAGCCGATGTCAATGCAGTTGCAGAAGACTCCCATACAGCATTACTA
CAAGCTGTCGCGACTGAGAAGATCAAAGTCGTCCAGCTCCTGCTCAACCA
TGGGGCTGATATAAGAGCACATTTGAAAAACCACAATTGCATTAAAATGG
CAGCCTACCATTCGAACCCAGACCTCCTTCGATTATTGATTCAGCAAGAT
CATGGTAGTGTGAATACCCCTAGTGACCGACAATGGACTCCACTTCACTT
CACCGCTCAGTTCGATAAAGAGCATACCCTAGAAACGGCACAGATACTCA
TAGACGCTGGTGCCAATGTTAATTCTCATACTAACCTGGGAGTTACGCCT
CTTTTCCTGGCTGTTCAATCAAATCGGCTCGACTTGGTTAAACTCCTTAT
CAACAAAGGCGCTGAGATTAACGTGTGCACCGAACAAGATATTACCCCGC
TGGAAAGAGCAATAGACAATTCTAACATTTCTATTATTGATTTCCTCATC
GACCAAGGAGCCTGGACAGATCACGTGGATAGAAGAGGTTTCAATATCAT
TCATATTGGAGCGATGCAAGGGGATGTGGCTGTTCTAGAAAGAATTCTCA
AGACAGGTGCCAATATAAAGGCATCTTCGACTGACGGGAAGAAACTTCGG
CCGATACATGTCGCCATCAACAACAACAATAAAGAGATCGCGTTGACTCT
ATTAGAACATGAAGCACAGCCGTGA
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Coding sequence (CDS) from alignment at MCQH01000074:334987..336461-

>ATCC10864_004564-T1 ID=ATCC10864_004564-T1|Name=ATCC10864_004564-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3447bp|location=Sequence derived from alignment at MCQH01000074:334987..336461- (Aspergillus niger ATCC 10864)
CTCAGAGAGATAGTGCCAGATTATGTCAAGCGCTTTTGGACAAGGACGCA
TTTATAGACGCCAGGGAAGACGACTCCTGGACACCCCTGATGCTAGCGGC
TCAGAACGGTCATTATAATGCATGCTGTACCCTAATCAAGCGCGGAGCCG
ATGTCAATGCAGTTGCAGAAGACTCCCATACAGCATTACTACAAGCTGTC
GCGACTGAGAAGATCAAAGTCGTCCAGCTCCTGCTCAACCATGGGGCTGA
TATAAGAGCACATTTGAAAAACCACAATTGCATTAAAATGGCAGCCTACC
ATTCGAACCCAGACCTCCTTCGATTATTGATTCAGCAAGATCATGGTAGT
GTGAATACCCCTAGTGACCGACAATGGACTCCACTTCACTTCACCGCTCA
GTTCGATAAAGAGCATACCCTAGAAACGGCACAGATACTCATAGACGCTG
GTGCCAATGTTAATTCTCATACTAACCTGGGAGTTACGCCTCTTTTCCTG
GCTGTTCAATCAAATCGGCTCGACTTGGTTAAACTCCTTATCAACAAAGG
CGCTGAGATTAACGTGTGCACCGAACAAGATATTACCCCGCTGGAAAGAG
CAATAGACAATTCTAACATTTCTATTATTGATTTCCTCATCGACCAAGGA
GCCTGGACAGATCACGTGGATAGAAGAGGTTTCAATATCATTCATATTGG
AGCGATGCAAGGGGATGTGGCTGTTCTAGAAAGAATTCTCAAGACAGGTG
CCAATATAAAGGCATCTTCGACTGACGGGAAGAAACTTCGGCCGATACAT
GTCGCCATCAACAACAACAATAAAGAGATCGCGTTGACTCTATTAGAACA
TGAAGCACAGCCGTGAGACTAATAATAAAGGCAGTGAATCTCCAATCGTC
CCAGATCCTCATGAAACAATCAGAAATGACACCACCACACAACCAGATAT
TATAGACTCAATATCTTCCAACAAGGTCGAAGACATACTGCGACTCGACC
TCGGAACTAAAAAAAGATTATCTCGCACTGAGGCCTTCGATGACTGCCGC
AAGACGAAAACGTTTACTCAATAAGGTTCAGAATTATCCAAAAAGAAGAA
AGAATGGACCTGATCCGTTCACCATATTAAATGATGATGGCGGAACATGC
TCAGAGAGATAGTGCCAGATTATGTCAAGCGCTTTTGGACAAGGACGCAT
TTATAGACGCCAGGGAAGACGACTCCTGGACACCCCTGATGCTAGCGGCT
CAGAACGGTCATTATAATGCATGCTGTACCCTAATCAAGCGCGGAGCCGA
TGTCAATGCAGTTGCAGAAGACTCCCATACAGCATTACTACAAGCTGTCG
CGACTGAGAAGATCAAAGTCGTCCAGCTCCTGCTCAACCATGGGGCTGAT
ATAAGAGCACATTTGAAAAACCACAATTGCATTAAAATGGCAGCCTACCA
TTCGAACCCAGACCTCCTTCGATTATTGATTCAGCAAGATCATGGTAGTG
TGAATACCCCTAGTGACCGACAATGGACTCCACTTCACTTCACCGCTCAG
TTCGATAAAGAGCATACCCTAGAAACGGCACAGATACTCATAGACGCTGG
TGCCAATGTTAATTCTCATACTAACCTGGGAGTTACGCCTCTTTTCCTGG
CTGTTCAATCAAATCGGCTCGACTTGGTTAAACTCCTTATCAACAAAGGC
GCTGAGATTAACGTGTGCACCGAACAAGATATTACCCCGCTGGAAAGAGC
AATAGACAATTCTAACATTTCTATTATTGATTTCCTCATCGACCAAGGAG
CCTGGACAGATCACGTGGATAGAAGAGGTTTCAATATCATTCATATTGGA
GCGATGCAAGGGGATGTGGCTGTTCTAGAAAGAATTCTCAAGACAGGTGC
CAATATAAAGGCATCTTCGACTGACGGGAAGAAACTTCGGCCGATACATG
TCGCCATCAACAACAACAATAAAGAGATCGCGTTGACTCTATTAGAACAT
GAAGCACAGCCGTGAGACTAATAATAAAGGCAGTGAATCTCCAATCGTCC
CAGATCCTCATGAAACAATCAGAAATGACACCACCACACAACCAGATATT
ATAGACTCAATATCTTCCAACAAGGTCGAAGACATACTGCGACTCGACCT
CGGAACTAAAAAAAGATTATCTCGCACTGAGGCCTTCGATGACTGCCGCA
AGACGAAAACGTTTACTCAATAAGGTTCAGAATTATCCAAAAAGAAGAAA
GAATGGACCTGATCCGTTCACCATATTAAATGATGATGGCGGAACATGCT
CAGAGAGATAGTGCCAGATTATGTCAAGCGCTTTTGGACAAGGACGCATT
TATAGACGCCAGGGAAGACGACTCCTGGACACCCCTGATGCTAGCGGCTC
AGAACGGTCATTATAATGCATGCTGTACCCTAATCAAGCGCGGAGCCGAT
GTCAATGCAGTTGCAGAAGACTCCCATACAGCATTACTACAAGCTGTCGC
GACTGAGAAGATCAAAGTCGTCCAGCTCCTGCTCAACCATGGGGCTGATA
TAAGAGCACATTTGAAAAACCACAATTGCATTAAAATGGCAGCCTACCAT
TCGAACCCAGACCTCCTTCGATTATTGATTCAGCAAGATCATGGTAGTGT
GAATACCCCTAGTGACCGACAATGGACTCCACTTCACTTCACCGCTCAGT
TCGATAAAGAGCATACCCTAGAAACGGCACAGATACTCATAGACGCTGGT
GCCAATGTTAATTCTCATACTAACCTGGGAGTTACGCCTCTTTTCCTGGC
TGTTCAATCAAATCGGCTCGACTTGGTTAAACTCCTTATCAACAAAGGCG
CTGAGATTAACGTGTGCACCGAACAAGATATTACCCCGCTGGAAAGAGCA
ATAGACAATTCTAACATTTCTATTATTGATTTCCTCATCGACCAAGGAGC
CTGGACAGATCACGTGGATAGAAGAGGTTTCAATATCATTCATATTGGAG
CGATGCAAGGGGATGTGGCTGTTCTAGAAAGAATTCTCAAGACAGGTGCC
AATATAAAGGCATCTTCGACTGACGGGAAGAAACTTCGGCCGATACATGT
CGCCATCAACAACAACAATAAAGAGATCGCGTTGACTCTATTAGAACATG
AAGCACAGCCGTGAGACTAATAATAAAGGCAGTGAATCTCCAATCGTCCC
AGATCCTCATGAAACAATCAGAAATGACACCACCACACAACCAGATATTA
TAGACTCAATATCTTCCAACAAGGTCGAAGACATACTGCGACTCGACCTC
GGAACTAAAAAAAGATTATCTCGCACTGAGGCCTTCGATGACTGCCGCAA
GACGAAAACGTTTACTCAATAAGGTTCAGAATTATCCAAAAAGAAGAAAG
AATGGACCTGATCCGTTCACCATATTAAATGATGATGGCGGAACATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004564ATCC10864_004564Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004564-T1ATCC10864_004564-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004564-T1.cdsATCC10864_004564-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004564-T1.exon3ATCC10864_004564-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004564-T1.exon2ATCC10864_004564-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004564-T1.exon1ATCC10864_004564-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF13637
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
PFAMPF13857
InterProIPR002110
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:334987..336461 -
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