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ATCC10864_004608-T1, ATCC10864_004608-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004608-T1
Unique NameATCC10864_004608-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:460399..461309+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004608-T1 ID=ATCC10864_004608-T1|Name=ATCC10864_004608-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=911bp|location=Sequence derived from alignment at MCQH01000074:460399..461309+ (Aspergillus niger ATCC 10864)
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGG
AGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGC
AAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTT
GGCTCGGTGAGTTGAACTGATATTGGATAAGCCTTGCCACTCTGTGAGAT
GTCGACTGACGATGCTTTCTGTCTAGCATGGCGTTAATATGAACACATCT
CTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAAG
TGAGTCACTACTTTTTGCCTCCGCAGTGCGTCTGCTAAACAGTAGTTAGT
ACGCACCACTCGAGCCCGGATTATTCGACTGCGGAATGACCATAAAGACG
TGATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAG
CGGGCGCAAACTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGT
GACTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAA
AGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGG
GTTGGAGATACCGTTCGGGAGTTCGGAAGTGCCAACTGGCTCAACCATGA
ACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAGAGTGAAGGGGTAAGTA
GGCGATGTGCTTCCAACCTCTTAGTCGTCTAGTCCAGGGACATGCACTCG
GGAGAACGCTCTAGGCTAACGTCTTCTAGCGCACTGTGGCGGTCAAAGTC
GTGAGGAAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCT
TGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCG
TGCCGCTGTAG
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Coding sequence (CDS) from alignment at MCQH01000074:460399..461309+

>ATCC10864_004608-T1 ID=ATCC10864_004608-T1|Name=ATCC10864_004608-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2820bp|location=Sequence derived from alignment at MCQH01000074:460399..461309+ (Aspergillus niger ATCC 10864)
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGG
AGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGC
AAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCTTCCTT
GGCTCGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTT
CCCACGAGACGATATCGATGTTGCCCAAATACGCACCACTCGAGCCCGGA
TTATTCGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGGAGAAA
GGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACA
GTCGGGTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATACCTCCG
GCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGGTGCCT
GGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGA
GTTCGGAAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGG
AGATAGTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCGTGAGG
AAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTTGTCCC
TCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGC
TGTAGATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACG
TCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCT
CATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCT
TCCTTGGCTCGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGAT
GGCTTCCCACGAGACGATATCGATGTTGCCCAAATACGCACCACTCGAGC
CCGGATTATTCGACTGCGGAATGACCATAAAGACGTGATGTCACATCTGG
AGAAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCC
GCACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAATAATAC
CTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAGTGTGG
TGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACCGTT
CGGGAGTTCGGAAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAGGGT
GGCGGAGATAGTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAAAGTCG
TGAGGAAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGCAGCTT
GTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGT
GCCGCTGTAGATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCC
CTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTC
GATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAG
TAGCTTCCTTGGCTCGCATGGCGTTAATATGAACACATCTCTCACTACTT
TCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAATACGCACCACT
CGAGCCCGGATTATTCGACTGCGGAATGACCATAAAGACGTGATGTCACA
TCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAA
CTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGTGACTGGGAAT
AATACCTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTCAATAG
TGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATA
CCGTTCGGGAGTTCGGAAGTGCCAACTGGCTCAACCATGAACGTCTCTCC
AGGGTGGCGGAGATAGTGCAGCAGAGTGAAGGGCGCACTGTGGCGGTCAA
AGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTCCCTGC
AGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCAT
CTCGTGCCGCTGTAGATGGGTTCCAACATTCATGCTCCAACAGTAGCCTC
CGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCA
TGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCT
CTGAGTAGCTTCCTTGGCTCGCATGGCGTTAATATGAACACATCTCTCAC
TACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAATACGCA
CCACTCGAGCCCGGATTATTCGACTGCGGAATGACCATAAAGACGTGATG
TCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGC
GCAAACTGCCGCACAGTCGGGTGGCTTGGGGTCGCAACCTAGTGTGACTG
GGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCCTTCGCAAAGGTC
AATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGG
AGATACCGTTCGGGAGTTCGGAAGTGCCAACTGGCTCAACCATGAACGTC
TCTCCAGGGTGGCGGAGATAGTGCAGCAGAGTGAAGGGCGCACTGTGGCG
GTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGCATCGACTTGTC
CCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGGCT
GTCATCTCGTGCCGCTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0070682proteasome regulatory particle assembly
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004608ATCC10864_004608Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004608-T1.exon1ATCC10864_004608-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004608-T1.exon2ATCC10864_004608-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004608-T1.exon3ATCC10864_004608-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004608-T1.exon4ATCC10864_004608-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004608-T1.cdsATCC10864_004608-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004608-T1ATCC10864_004608-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF18265
InterProIPR041489
InterProIPR040815
PFAMPF17820
PFAMPF13180
PFAMPF00595
InterProIPR035269
InterProIPR001478
InterProIPR036034
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:460399..461309 +
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