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ATCC10864_004609-T1, ATCC10864_004609-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004609-T1
Unique NameATCC10864_004609-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:461944..463003+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004609-T1 ID=ATCC10864_004609-T1|Name=ATCC10864_004609-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1060bp|location=Sequence derived from alignment at MCQH01000074:461944..463003+ (Aspergillus niger ATCC 10864)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGG
TACTGGAAAGGCAAGTTAAAACAAGAATTTCTTATCCTATATGGCTTACC
GGGTGGAGGTGGCATGTCACCTCTTCGACGCCTCTTTATGCTCGACTGCA
TTCCTGCCATGCGCGTTTACCCCTCTCTGTTGCCCGTCGTCTCTATCAAC
AGAAAACTTCATCGCCCGCCCAACCTCACCCAGACAAGACATCATTACTG
ACTGAGAATTTTCACTGCAGACCACCTTCGTCAAGCGCCACTTGACTGGC
GAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCT
CGCTTTTAACACCGTATGCCCCGCCGGAAACCCCGCTTTGTCCATTCCGC
CGTCTTTGTGCCGGTCCGACTAACGCTTTTGCCAGAACCTGGGTAACATC
CAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCG
CGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTA
CCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTAAGTGCTTC
CACAAATCAGCACTCGAACCACGCGCAATCTGGATCAAATTGACAAATTC
ACTCTAGGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTG
CGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCA
CCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCC
AACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGG
CAACCCCCAGCTGGTAAGTCAGACACGGTCATTGGTCGCTTTCACTGGTG
AGACTGGAAGCTAACAAGCATTTCCCAGGAATTCGTTGCTGCCCCCGCTC
TTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAG
AAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGACGC
CGATTTGTAA
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Coding sequence (CDS) from alignment at MCQH01000074:461944..463003+

>ATCC10864_004609-T1 ID=ATCC10864_004609-T1|Name=ATCC10864_004609-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3225bp|location=Sequence derived from alignment at MCQH01000074:461944..463003+ (Aspergillus niger ATCC 10864)
ATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGG
TACTGGAAAGACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGA
AGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAAC
ACCAACCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGA
GAAGTTCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTA
TCATCATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAAC
TGGCACCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTG
CGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCA
CCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCC
AACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGG
CAACCCCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGG
TCCAAGTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCT
GCTGCCAACATGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGC
TGCTCAGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTG
GAAAGACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAG
TACATCGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAA
CCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGT
TCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATC
ATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCA
CCGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTA
ACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTC
CACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTA
CAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACC
CCCAGCTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAA
GTCAACCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGC
CAACATGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTC
AGGTACCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAG
ACCACCTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACAT
CGCCACTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGG
GTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGT
GGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTT
CGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTG
ATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAG
GTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCG
CAAGAAGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATT
TCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAG
CTGGAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAA
CCCGGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACA
TGCCCCTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTA
CCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGACCAC
CTTCGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCA
CTCTCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGGTAAC
ATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCT
TCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATG
TTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTGATCTC
GTCCGTGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGA
TGTTAAGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGA
AGAACCTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAG
AAGCCCTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGA
ATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGG
AGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCC
CTGCCCGACGAGGAGGACGCCGATTTGTAAATGGCTGCTCAGGTACCGAC
CTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGACCACCTTCG
TCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTC
GGTGTCGAAGTGCACCCTCTCGCTTTTAACACCAACCTGGGTAACATCCA
GTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCG
ATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACC
TCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCGTGATCTCGTCCG
TGTCTGCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTA
AGGAGCGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAAC
CTCCAGTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCC
CTTCCTCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGAATTCG
TTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTT
CTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCC
CGACGAGGAGGACGCCGATTTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GSP1ATCC10864_004609Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004609-T1ATCC10864_004609-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004609-T1.exon1ATCC10864_004609-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004609-T1.exon2ATCC10864_004609-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004609-T1.exon3ATCC10864_004609-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004609-T1.exon4ATCC10864_004609-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004609-T1.exon5ATCC10864_004609-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004609-T1.cdsATCC10864_004609-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027417
PFAMPF00025
PFAMPF00071
InterProIPR001806
InterProIPR002041
PFAMPF08477
InterProIPR005225
Properties
Property NameValue
NoteBUSCO:EOG09264LKR
ProductGTP-binding nuclear protein gsp1/Ran
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:461944..463003 +
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