You are here

Home

ATCC10864_004624-T1, ATCC10864_004624-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004624-T1
Unique NameATCC10864_004624-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:10581..12002+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004624-T1 ID=ATCC10864_004624-T1|Name=ATCC10864_004624-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1422bp|location=Sequence derived from alignment at MCQH01000084:10581..12002+ (Aspergillus niger ATCC 10864)
ATGGAGCTGGTGCAGAAGGAGCACGACCGGCTTTCCAAGAAGATCAAGGC
CGGTCAAGGAATTAAGAACGTGCAGTCTACCATAGATTTACTTCAGTCGG
CACGAGATGCAATTGCTGCAGGTGCGTGTGCCTCGTCGGACGTTGCGCGG
GCTTGATCCTGGAACTATACTGATCACGAGGACAATCCCAGATCCCAGTC
AAGCATCCATTACACTGGCTAAGCTCCAGAATCCCGTCAAATCGTCTTTT
GATTCCATCAACGATAGTCTAAAAGAAACACACAGTGGTCTCAACAAATA
CTCCAAATCGTTAGATAAGGTAGCACGCGTCAGGCTCTTACGGTGAATGG
CATATGTTAACTACTTCACTGTCGCAGTTGTTCAAAGATCGACCTTTGCC
GAGCACCGAGCATGATGTCCTTTCGTCCCAAGAACACCTTATCAACAGGG
CCATCGCCATGCACCTTCTCCGAGAAGGACAGTTTTCCGTTGCGTCGGAG
TTCCTGAACGAAATGGCACAAAAGAAAGCGATGAAAAAGCAGCAAGAAGG
AGATATAGAGGCTATAGACAATGCGGCCTCGCTCTTAGATCTCGATGAAG
TTCCGCCGGGTGAGGTGCGGCAACAGTTCCACACCATGTACCACATCCTT
CATGAGCTGAAGGAAAACAACAACCTGCTGCCGGCAATACAGTGGTCCAG
GGAGAATAAGGAGGCCTTGGAAGCGAGAGGTAGTAACCTTGAGTTCGAAT
TGTGCAGGCTGCAATTCGTCTGGCTTTTCTACGGCGGACAGCATCAGCAA
GGACCCAGTCCGGGTGGACGGCAGGCAGCTTTGGAATATGGCAGGCGTGA
ATTCCACACGTTCTTGCCCAGGTATCTGCGCGAGGTCCAACAGCTCATGG
GTGCCATGGCATTTTGCCCCAATCTGCGAGACTCCCCGTACAATCATATC
TTCAATAACCCGTCGGCATGGTCCGATGTGGCACACTCATTCACGCGAGA
GTTTTGCTCGCTCCTCGGCTTGTCGGCCGATTCGCCCCTATATGTTGCTG
CTACGGCTGGTGCGATAGCGTTGCCGACACTGTTGAAGTTGCAGACTATC
ATGAAAGCCAAACGCACCGAGTGGACCACGGAGAATGAGCTCCCGGTAAG
TTACCTTGATTGGCATGCATGACGGTTCGTGGACTGACTGGTACGCCTTA
TAGGTTGAGATTCCGCTACCGCCGTCATATCTCTTCCATTCTATTTTTGT
ATGTCCCGTGTCAAAGGAGCAAACCACGGATGAGAATCCCCCCATGATGA
TGCCCTGTGGGCATGTTATCGCGGAGGAGTCACTCAAACGGTTGTGCAAG
GGTAGCCGGTTCAAGTGCCCTTACTGCCCGAGTGAGAGTCATCCTCGGGA
GGCGCGAAAGGTATTCCTCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000084:10581..12002+

>ATCC10864_004624-T1 ID=ATCC10864_004624-T1|Name=ATCC10864_004624-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4944bp|location=Sequence derived from alignment at MCQH01000084:10581..12002+ (Aspergillus niger ATCC 10864)
ATGGAGCTGGTGCAGAAGGAGCACGACCGGCTTTCCAAGAAGATCAAGGC
CGGTCAAGGAATTAAGAACGTGCAGTCTACCATAGATTTACTTCAGTCGG
CACGAGATGCAATTGCTGCAGATCCCAGTCAAGCATCCATTACACTGGCT
AAGCTCCAGAATCCCGTCAAATCGTCTTTTGATTCCATCAACGATAGTCT
AAAAGAAACACACAGTGGTCTCAACAAATACTCCAAATCGTTAGATAAGT
TGTTCAAAGATCGACCTTTGCCGAGCACCGAGCATGATGTCCTTTCGTCC
CAAGAACACCTTATCAACAGGGCCATCGCCATGCACCTTCTCCGAGAAGG
ACAGTTTTCCGTTGCGTCGGAGTTCCTGAACGAAATGGCACAAAAGAAAG
CGATGAAAAAGCAGCAAGAAGGAGATATAGAGGCTATAGACAATGCGGCC
TCGCTCTTAGATCTCGATGAAGTTCCGCCGGGTGAGGTGCGGCAACAGTT
CCACACCATGTACCACATCCTTCATGAGCTGAAGGAAAACAACAACCTGC
TGCCGGCAATACAGTGGTCCAGGGAGAATAAGGAGGCCTTGGAAGCGAGA
GGTAGTAACCTTGAGTTCGAATTGTGCAGGCTGCAATTCGTCTGGCTTTT
CTACGGCGGACAGCATCAGCAAGGACCCAGTCCGGGTGGACGGCAGGCAG
CTTTGGAATATGGCAGGCGTGAATTCCACACGTTCTTGCCCAGGTATCTG
CGCGAGGTCCAACAGCTCATGGGTGCCATGGCATTTTGCCCCAATCTGCG
AGACTCCCCGTACAATCATATCTTCAATAACCCGTCGGCATGGTCCGATG
TGGCACACTCATTCACGCGAGAGTTTTGCTCGCTCCTCGGCTTGTCGGCC
GATTCGCCCCTATATGTTGCTGCTACGGCTGGTGCGATAGCGTTGCCGAC
ACTGTTGAAGTTGCAGACTATCATGAAAGCCAAACGCACCGAGTGGACCA
CGGAGAATGAGCTCCCGGTTGAGATTCCGCTACCGCCGTCATATCTCTTC
CATTCTATTTTTGTATGTCCCGTGTCAAAGGAGCAAACCACGGATGAGAA
TCCCCCCATGATGATGCCCTGTGGGCATGTTATCGCGGAGGAGTCACTCA
AACGGTTGTGCAAGGGTAGCCGGTTCAAGTGCCCTTACTGCCCGAGTGAG
AGTCATCCTCGGGAGGCGCGAAAGGTATTCCTCTAGATGGAGCTGGTGCA
GAAGGAGCACGACCGGCTTTCCAAGAAGATCAAGGCCGGTCAAGGAATTA
AGAACGTGCAGTCTACCATAGATTTACTTCAGTCGGCACGAGATGCAATT
GCTGCAGATCCCAGTCAAGCATCCATTACACTGGCTAAGCTCCAGAATCC
CGTCAAATCGTCTTTTGATTCCATCAACGATAGTCTAAAAGAAACACACA
GTGGTCTCAACAAATACTCCAAATCGTTAGATAAGTTGTTCAAAGATCGA
CCTTTGCCGAGCACCGAGCATGATGTCCTTTCGTCCCAAGAACACCTTAT
CAACAGGGCCATCGCCATGCACCTTCTCCGAGAAGGACAGTTTTCCGTTG
CGTCGGAGTTCCTGAACGAAATGGCACAAAAGAAAGCGATGAAAAAGCAG
CAAGAAGGAGATATAGAGGCTATAGACAATGCGGCCTCGCTCTTAGATCT
CGATGAAGTTCCGCCGGGTGAGGTGCGGCAACAGTTCCACACCATGTACC
ACATCCTTCATGAGCTGAAGGAAAACAACAACCTGCTGCCGGCAATACAG
TGGTCCAGGGAGAATAAGGAGGCCTTGGAAGCGAGAGGTAGTAACCTTGA
GTTCGAATTGTGCAGGCTGCAATTCGTCTGGCTTTTCTACGGCGGACAGC
ATCAGCAAGGACCCAGTCCGGGTGGACGGCAGGCAGCTTTGGAATATGGC
AGGCGTGAATTCCACACGTTCTTGCCCAGGTATCTGCGCGAGGTCCAACA
GCTCATGGGTGCCATGGCATTTTGCCCCAATCTGCGAGACTCCCCGTACA
ATCATATCTTCAATAACCCGTCGGCATGGTCCGATGTGGCACACTCATTC
ACGCGAGAGTTTTGCTCGCTCCTCGGCTTGTCGGCCGATTCGCCCCTATA
TGTTGCTGCTACGGCTGGTGCGATAGCGTTGCCGACACTGTTGAAGTTGC
AGACTATCATGAAAGCCAAACGCACCGAGTGGACCACGGAGAATGAGCTC
CCGGTTGAGATTCCGCTACCGCCGTCATATCTCTTCCATTCTATTTTTGT
ATGTCCCGTGTCAAAGGAGCAAACCACGGATGAGAATCCCCCCATGATGA
TGCCCTGTGGGCATGTTATCGCGGAGGAGTCACTCAAACGGTTGTGCAAG
GGTAGCCGGTTCAAGTGCCCTTACTGCCCGAGTGAGAGTCATCCTCGGGA
GGCGCGAAAGGTATTCCTCTAGATGGAGCTGGTGCAGAAGGAGCACGACC
GGCTTTCCAAGAAGATCAAGGCCGGTCAAGGAATTAAGAACGTGCAGTCT
ACCATAGATTTACTTCAGTCGGCACGAGATGCAATTGCTGCAGATCCCAG
TCAAGCATCCATTACACTGGCTAAGCTCCAGAATCCCGTCAAATCGTCTT
TTGATTCCATCAACGATAGTCTAAAAGAAACACACAGTGGTCTCAACAAA
TACTCCAAATCGTTAGATAAGTTGTTCAAAGATCGACCTTTGCCGAGCAC
CGAGCATGATGTCCTTTCGTCCCAAGAACACCTTATCAACAGGGCCATCG
CCATGCACCTTCTCCGAGAAGGACAGTTTTCCGTTGCGTCGGAGTTCCTG
AACGAAATGGCACAAAAGAAAGCGATGAAAAAGCAGCAAGAAGGAGATAT
AGAGGCTATAGACAATGCGGCCTCGCTCTTAGATCTCGATGAAGTTCCGC
CGGGTGAGGTGCGGCAACAGTTCCACACCATGTACCACATCCTTCATGAG
CTGAAGGAAAACAACAACCTGCTGCCGGCAATACAGTGGTCCAGGGAGAA
TAAGGAGGCCTTGGAAGCGAGAGGTAGTAACCTTGAGTTCGAATTGTGCA
GGCTGCAATTCGTCTGGCTTTTCTACGGCGGACAGCATCAGCAAGGACCC
AGTCCGGGTGGACGGCAGGCAGCTTTGGAATATGGCAGGCGTGAATTCCA
CACGTTCTTGCCCAGGTATCTGCGCGAGGTCCAACAGCTCATGGGTGCCA
TGGCATTTTGCCCCAATCTGCGAGACTCCCCGTACAATCATATCTTCAAT
AACCCGTCGGCATGGTCCGATGTGGCACACTCATTCACGCGAGAGTTTTG
CTCGCTCCTCGGCTTGTCGGCCGATTCGCCCCTATATGTTGCTGCTACGG
CTGGTGCGATAGCGTTGCCGACACTGTTGAAGTTGCAGACTATCATGAAA
GCCAAACGCACCGAGTGGACCACGGAGAATGAGCTCCCGGTTGAGATTCC
GCTACCGCCGTCATATCTCTTCCATTCTATTTTTGTATGTCCCGTGTCAA
AGGAGCAAACCACGGATGAGAATCCCCCCATGATGATGCCCTGTGGGCAT
GTTATCGCGGAGGAGTCACTCAAACGGTTGTGCAAGGGTAGCCGGTTCAA
GTGCCCTTACTGCCCGAGTGAGAGTCATCCTCGGGAGGCGCGAAAGGTAT
TCCTCTAGATGGAGCTGGTGCAGAAGGAGCACGACCGGCTTTCCAAGAAG
ATCAAGGCCGGTCAAGGAATTAAGAACGTGCAGTCTACCATAGATTTACT
TCAGTCGGCACGAGATGCAATTGCTGCAGATCCCAGTCAAGCATCCATTA
CACTGGCTAAGCTCCAGAATCCCGTCAAATCGTCTTTTGATTCCATCAAC
GATAGTCTAAAAGAAACACACAGTGGTCTCAACAAATACTCCAAATCGTT
AGATAAGTTGTTCAAAGATCGACCTTTGCCGAGCACCGAGCATGATGTCC
TTTCGTCCCAAGAACACCTTATCAACAGGGCCATCGCCATGCACCTTCTC
CGAGAAGGACAGTTTTCCGTTGCGTCGGAGTTCCTGAACGAAATGGCACA
AAAGAAAGCGATGAAAAAGCAGCAAGAAGGAGATATAGAGGCTATAGACA
ATGCGGCCTCGCTCTTAGATCTCGATGAAGTTCCGCCGGGTGAGGTGCGG
CAACAGTTCCACACCATGTACCACATCCTTCATGAGCTGAAGGAAAACAA
CAACCTGCTGCCGGCAATACAGTGGTCCAGGGAGAATAAGGAGGCCTTGG
AAGCGAGAGGTAGTAACCTTGAGTTCGAATTGTGCAGGCTGCAATTCGTC
TGGCTTTTCTACGGCGGACAGCATCAGCAAGGACCCAGTCCGGGTGGACG
GCAGGCAGCTTTGGAATATGGCAGGCGTGAATTCCACACGTTCTTGCCCA
GGTATCTGCGCGAGGTCCAACAGCTCATGGGTGCCATGGCATTTTGCCCC
AATCTGCGAGACTCCCCGTACAATCATATCTTCAATAACCCGTCGGCATG
GTCCGATGTGGCACACTCATTCACGCGAGAGTTTTGCTCGCTCCTCGGCT
TGTCGGCCGATTCGCCCCTATATGTTGCTGCTACGGCTGGTGCGATAGCG
TTGCCGACACTGTTGAAGTTGCAGACTATCATGAAAGCCAAACGCACCGA
GTGGACCACGGAGAATGAGCTCCCGGTTGAGATTCCGCTACCGCCGTCAT
ATCTCTTCCATTCTATTTTTGTATGTCCCGTGTCAAAGGAGCAAACCACG
GATGAGAATCCCCCCATGATGATGCCCTGTGGGCATGTTATCGCGGAGGA
GTCACTCAAACGGTTGTGCAAGGGTAGCCGGTTCAAGTGCCCTTACTGCC
CGAGTGAGAGTCATCCTCGGGAGGCGCGAAAGGTATTCCTCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0061630ubiquitin protein ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004624ATCC10864_004624Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004624-T1.exon1ATCC10864_004624-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004624-T1.exon2ATCC10864_004624-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004624-T1.exon3ATCC10864_004624-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004624-T1.exon4ATCC10864_004624-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004624-T1.cdsATCC10864_004624-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004624-T1ATCC10864_004624-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR024964
InterProIPR027711
InterProIPR013144
InterProIPR044063
InterProIPR037683
InterProIPR013083
InterProIPR027370
PFAMPF13445
PFAMPF10607
Properties
Property NameValue
NoteBUSCO:EOG09263QPR
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:10581..12002 +
Powered by Drupal