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ATCC10864_004626-T1, ATCC10864_004626-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004626-T1
Unique NameATCC10864_004626-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:15002..16571-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004626-T1 ID=ATCC10864_004626-T1|Name=ATCC10864_004626-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1570bp|location=Sequence derived from alignment at MCQH01000084:15002..16571- (Aspergillus niger ATCC 10864)
ATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGG
TGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCG
ACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCC
GACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCA
AGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGG
GGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAG
GTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTC
GACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGA
GATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAA
GACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAA
GAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTT
TGTGTCTAAGTGACCGGTAAGCTATGTCCGGAAGCGTCGTGGATATACCA
TGCTAATGTTGTCTAGGGCACCGATCGAGGAATCGCGGAAATGGGGCATT
TACGACACTACGAACCTGTTGTTCAAGACATACTTTAAGCTTAACACCGT
TGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACC
TTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTAC
TATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAGTATGTGC
TTCAATCATCAATGTTAGTTGCCGGTGCTAATAGCTGGTTTCAATAGGCT
GAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAA
GAATAGAGAGTCAGTACTCCACATGCCGCCCCATGCTACATTGCTGACTA
CTTCAAGATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACA
CATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAA
GCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGT
TCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATA
TACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCG
CAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTC
CTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGG
ATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGA
ATGTCTGTTGTCGAACCTTATCTACAAGGTGCGTGTTGAGGTGCCCGAAC
TCTATCAAAGCATTTGACTGACCAAAATTGTAGGGGTTGATGAAAGGATA
CATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCAT
TCCCTGGAACGGGGGTTTAA
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Coding sequence (CDS) from alignment at MCQH01000084:15002..16571-

>ATCC10864_004626-T1 ID=ATCC10864_004626-T1|Name=ATCC10864_004626-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6810bp|location=Sequence derived from alignment at MCQH01000084:15002..16571- (Aspergillus niger ATCC 10864)
GGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAG
CAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAATTGATTCTCACC
TACCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAAA
GCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCG
ACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCC
GGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGG
ACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTG
GATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTT
CCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACGA
CCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTA
TCTACAAGGCTGAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAA
CATGCCACAAAGAATAGAGAGGCACCGATCGAGGAATCGCGGAAATGGGG
CATTTACGACACTACGAACCTGTTGTTCAAGACATACTTTAAGCTTAACA
CCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCC
GACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGA
GTACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAATGT
CCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCC
CGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCG
ATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGACC
TCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAG
CAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGA
GATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGT
TCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTCGACA
GGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATA
TTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACT
CCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAAGAAT
CCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTGTG
TCTAAGTGACCGGGGTTGATGAAAGGATACATTGCCCGTGAGCGCGGCAT
GGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAA
TTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCACCACACATACCCT
GCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCC
GTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCC
GCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACGCATATACTTGCC
CCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCT
TTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGC
CGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTAC
TCATGCTGACGACCGGTCCCGCATAGACATTGATGAGGTTGAATGTCTGT
TGTCGAACCTTATCTACAAGGCTGAAGAGCATTTGTCGTACGCATGGAGG
ATGTGCAACAAACATGCCACAAAGAATAGAGAGGCACCGATCGAGGAATC
GCGGAAATGGGGCATTTACGACACTACGAACCTGTTGTTCAAGACATACT
TTAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAAT
GCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATAT
TGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTCTGGATGAGAATT
ATGCCGAAATGTCCAATATCTTTGATGATTTCAAGGAAGGCCAGAAGATC
GGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGA
GTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTAACGCCGCACATG
TCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTT
CCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTACCGCTTATTGGAA
AGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAAGACATGCCAGTT
GGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAATCAATTAATCAGG
GGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTC
TGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTT
CTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAAGATGATGCGACG
GATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAAT
GTTCACTTTGTGTCTAAGTGACCGGGGTTGATGAAAGGATACATTGCCCG
TGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTGCATTCCCTGGAA
CGGGGGTTTAAATTGATTCTCACCTACCTCGTCCCCTGCCACCTCGTCAC
CACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGTTTCCTCGTCTCG
AGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGGGGAGACCTGGGC
GGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATTTGTTAAGAGACG
CATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTTTACGGAACCTCT
TCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCCAAGGAAGGACAG
CCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTTTGCAGCGGCATT
AAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAGACATTGATGAGG
TTGAATGTCTGTTGTCGAACCTTATCTACAAGGCTGAAGAGCATTTGTCG
TACGCATGGAGGATGTGCAACAAACATGCCACAAAGAATAGAGAGGCACC
GATCGAGGAATCGCGGAAATGGGGCATTTACGACACTACGAACCTGTTGT
TCAAGACATACTTTAAGCTTAACACCGTTGGCCTCTCCAAGAACTTGCTG
CGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTTGGACGCCTTCCC
CAAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTGTTATACACTTTC
TGGATGAGAATTATGCCGAAATGTCCAATATCTTTGATGATTTCAAGGAA
GGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATCTCTCTCCCCCGT
CGCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCTATTACTTTTCTA
ACGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTCTTCCAGGCGAAT
GGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGTCGATATCTTTAC
CGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTGACGACTCCCCAA
GACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAGGATACGGCAAAT
CAATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGCCTGGACAGTGCC
ATGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCGCGATGAAGGCAG
ATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGACGATCGCTTCCAA
GATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGAAGCTACACGAGT
GCTCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGGGTTGATGAAAGG
ATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCAAAGGTGGAACTG
CATTCCCTGGAACGGGGGTTTAAATTGATTCTCACCTACCTCGTCCCCTG
CCACCTCGTCACCACACATACCCTGCCCAGCAAAAAGCTGCTTGCACCGT
TTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGACTGCATCAAAAGG
GGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGGGGAAGAGGAATT
TGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGGACGCGATATCGCTT
TACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGATTTGACGAGCCC
AAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCCCGTTGCCGAGTT
TGCAGCGGCATTAAGGATCGGTACTCATGCTGACGACCGGTCCCGCATAG
ACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATCTACAAGGCTGAA
GAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACATGCCACAAAGAA
TAGAGAGGCACCGATCGAGGAATCGCGGAAATGGGGCATTTACGACACTA
CGAACCTGTTGTTCAAGACATACTTTAAGCTTAACACCGTTGGCCTCTCC
AAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGACCTTCCTGGCTT
GGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGTACTATGTCGGTG
TTATACACTTTCTGGATGAGAATTATGCCGAAATGTCCAATATCTTTGAT
GATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCGCCTGGCGGCATC
TCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGATTGAAGTCGTTCT
ATTACTTTTCTAACGCCGCACATGTCTCCGCCGACCTCCGATACTCGCTC
TTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCAGAACTCCTGGGT
CGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGATTGTTCGATTTG
ACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTCGATGCTTGGAAG
GATACGGCAAATCAATTAATCAGGGGATACTCGACAGGCAGTTTGCAAGC
CTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATATTTGCGGGCATTCG
CGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCCGTCACTTTCGAC
GATCGCTTCCAAGATGATGCGACGGATGCCAAGAATCCAAAGTTGGAGGA
AGCTACACGAGTGCTCAACAGAATGTTCACTTTGTGTCTAAGTGACCGGG
GTTGATGAAAGGATACATTGCCCGTGAGCGCGGCATGGTCGTATTGAGCA
AAGGTGGAACTGCATTCCCTGGAACGGGGGTTTAAATTGATTCTCACCTA
CCTCGTCCCCTGCCACCTCGTCACCACACATACCCTGCCCAGCAAAAAGC
TGCTTGCACCGTTTCCTCGTCTCGAGAAGCTCTTCCGTCCTTTGTGCGAC
TGCATCAAAAGGGGAGACCTGGGCGGGTTCGATGCCGCAATGACAGCCGG
GGAAGAGGAATTTGTTAAGAGACGCATATACTTGCCCCTGGAAAGGGGAC
GCGATATCGCTTTACGGAACCTCTTCCGCAAGGTCTTTATTGCCGGTGGA
TTTGACGAGCCCAAGGAAGGACAGCCTCCTATCCGCCGCACACGGGTTCC
CGTTGCCGAGTTTGCAGCGGCATTAAGGATCGGTACTCATGCTGACGACC
GGTCCCGCATAGACATTGATGAGGTTGAATGTCTGTTGTCGAACCTTATC
TACAAGGCTGAAGAGCATTTGTCGTACGCATGGAGGATGTGCAACAAACA
TGCCACAAAGAATAGAGAGGCACCGATCGAGGAATCGCGGAAATGGGGCA
TTTACGACACTACGAACCTGTTGTTCAAGACATACTTTAAGCTTAACACC
GTTGGCCTCTCCAAGAACTTGCTGCGGGCCCTCAATGCCTCGTCTGCCGA
CCTTCCTGGCTTGGACGCCTTCCCCAAGTCCCATATTGTCACCTTTGAGT
ACTATGTCGGTGTTATACACTTTCTGGATGAGAATTATGCCGAAATGTCC
AATATCTTTGATGATTTCAAGGAAGGCCAGAAGATCGGCTCTGGTGCCCG
CCTGGCGGCATCTCTCTCCCCCGTCGCGACTGCGGAGTACCCCGACCGAT
TGAAGTCGTTCTATTACTTTTCTAACGCCGCACATGTCTCCGCCGACCTC
CGATACTCGCTCTTCCAGGCGAATGGCTTGAGGCTTCCCAAGCAAGAGCA
GAACTCCTGGGTCGATATCTTTACCGCTTATTGGAAAGCTGTGGGGGAGA
TTGTTCGATTTGACGACTCCCCAAGACATGCCAGTTGGGTGAAGGTGTTC
GATGCTTGGAAGGATACGGCAAATCAATTAATCAGGGGATACTCGACAGG
CAGTTTGCAAGCCTGGACAGTGCCATGCTTGTATTCTGTCGGGAGATATT
TGCGGGCATTCGCGATGAAGGCAGATGCTGAGCTTTCTGCCCAAGACTCC
GTCACTTTCGACGATCGCTTCCAAGATGATGCGACGGATGCCAAGAATCC
AAAGTTGGAGGAAGCTACACGAGTGCTCAACAGAATGTTCACTTTGTGTC
TAAGTGACCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CSN12ATCC10864_004626Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004626-T1ATCC10864_004626-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004626-T1.cdsATCC10864_004626-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004626-T1.exon5ATCC10864_004626-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004626-T1.exon4ATCC10864_004626-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004626-T1.exon3ATCC10864_004626-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004626-T1.exon2ATCC10864_004626-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004626-T1.exon1ATCC10864_004626-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01399
InterProIPR036388
InterProIPR000717
Properties
Property NameValue
ProductCOP9 signalosome (CSN) subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:15002..16571 -
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