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ATCC10864_004641-T1, ATCC10864_004641-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004641-T1
Unique NameATCC10864_004641-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:63327..64468-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004641-T1 ID=ATCC10864_004641-T1|Name=ATCC10864_004641-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1142bp|location=Sequence derived from alignment at MCQH01000084:63327..64468- (Aspergillus niger ATCC 10864)
ATGTCTGTCAGCTCAGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAG
CGTCAGATTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGA
TCGCCAAACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCA
CGTTTGCCTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAA
GCCTCACCAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGT
CCAGCAAGCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGAT
GTAAGACTCCCCGTGGCACACCAGCACGAAGATTCCAACGAACGAACAAG
CATCTGACCCTTGTATGCGGAACCCAACAGGCATTGAAGTTCATCCCTAA
CCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTCCTCGAATACCTGT
CTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGGCAGCAAGC
CTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACGGGCCTGACTTCAT
CACCGTAACTAAGGCGACCGACTCCAACTGGGCGCACATCAAGCCCGAAA
TCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGAGGCGATCGTGAAC
ACCGTTGCAAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAGTCGGAGTC
CCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGCATGATCAAGGAGC
TTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGACGGTGGCGACATT
GAGTTCCGCGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTGCGCGGTGC
TTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGTAACGGTATTGAGT
CTATGCTTATGCATTATGTGAGTATCACACTACCTGCATGCATCTTGACA
ATAAAGTTTGACTAATTGTGTGCTTTTTACCTACAGATTGAAGAAGTCCA
AGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGT
TCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACT
GCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGA
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Coding sequence (CDS) from alignment at MCQH01000084:63327..64468-

>ATCC10864_004641-T1 ID=ATCC10864_004641-T1|Name=ATCC10864_004641-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2979bp|location=Sequence derived from alignment at MCQH01000084:63327..64468- (Aspergillus niger ATCC 10864)
ATTGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGAT
TTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGG
GCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCA
CCTTGAGCATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTT
CCCGACCACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTC
CGCACCCCTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACC
TCTGTATTTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTC
CAACTGGGCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCG
TGACATCGGGCGAGGCGATCGTGAACACCGTTGCAAAGACTGGTGAGAGT
GGCCAGGAAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGA
TGAGGTGATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCG
CCATCCAGGAAGACGGTGGCGACATTGAGTTCCGCGGCTTTGAGAACGGC
ATTGTCTTGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCAC
CGTGACGCTGCGTAACGGTATTGAGTCTATGCTTATGCATTATATGTCTG
TCAGCTCAGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGA
TTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAA
ACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGC
CTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCAC
CAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAA
GCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGATATTGAAG
AAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATG
CACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGC
CGCTACTGCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAG
CATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACC
ACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCC
CTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTAT
TTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAACTGG
GCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATC
GGGCGAGGCGATCGTGAACACCGTTGCAAAGACTGGTGAGAGTGGCCAGG
AAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTG
ATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCA
GGAAGACGGTGGCGACATTGAGTTCCGCGGCTTTGAGAACGGCATTGTCT
TGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACG
CTGCGTAACGGTATTGAGTCTATGCTTATGCATTATATGTCTGTCAGCTC
AGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAA
CGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCG
GTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTAT
CACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACT
CGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACG
ATATTCATTCAGACGGAAAACACACCGAACCCTGATATTGAAGAAGTCCA
AGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGT
TCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACT
GCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAGCATTGAA
GTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTCC
TCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCCC
TTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACGG
GCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAACTGGGCGCACA
TCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGAG
GCGATCGTGAACACCGTTGCAAAGACTGGTGAGAGTGGCCAGGAAGGTGG
CGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGCA
TGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGAC
GGTGGCGACATTGAGTTCCGCGGCTTTGAGAACGGCATTGTCTTGTTGAA
GCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGTA
ACGGTATTGAGTCTATGCTTATGCATTATATGTCTGTCAGCTCAGCGTCT
GGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAACGCAGCA
ACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGTTCG
GATCATACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTATCACCGCC
TCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACTCGCTCGT
GCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACGATATTCA
TTCAGACGGAAAACACACCGAACCCTGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004641ATCC10864_004641Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004641-T1ATCC10864_004641-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004641-T1.cdsATCC10864_004641-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004641-T1.exon3ATCC10864_004641-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004641-T1.exon2ATCC10864_004641-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004641-T1.exon1ATCC10864_004641-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR034904
InterProIPR014824
InterProIPR001075
InterProIPR035433
PFAMPF08712
InterProIPR036498
PFAMPF01106
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:63327..64468 -
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