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ATCC10864_004646-T1, ATCC10864_004646-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004646-T1
Unique NameATCC10864_004646-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:75675..76925-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004646-T1 ID=ATCC10864_004646-T1|Name=ATCC10864_004646-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1251bp|location=Sequence derived from alignment at MCQH01000084:75675..76925- (Aspergillus niger ATCC 10864)
ATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAGTTATCAT
ACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTGCACGTCT
TCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTTCCACCCC
GGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCACCGTCCT
GGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGACTCGACC
TATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGACGACAGT
CTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGCTCGTAAT
CGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTGGTGGCGC
AGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCGGCGGCAG
GCGCTGGATCGCGGGGCCGCAAAACTGGGCATTAAGCATGTGGTGACGGG
TCATAATGCGGACGATGTGGCGGAGACGGTGATGATGAATTTGTTGAGAG
GGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGGGTCCGCC
GCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATGAGAAGGA
GATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCTACGGAGT
GTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTTGATTAAG
GATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTAAGTCTGG
GGAGGATATGGCGCTTCTGGTGCCCGCGGAGGTTAGGGGGAAGGGGGCTG
AGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAATGGGCGG
ACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGGAGGATGA
GGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTGTCTAGGA
GGCAGCAGCAGCAGCAGTCGGAGCAGATGCAGACGCCGGCTCAAAAGAAG
GTCAAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCTCCAG
TCAGCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAGAATC
GGCCCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGAGAGC
AGCTCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTGTTTG
A
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Coding sequence (CDS) from alignment at MCQH01000084:75675..76925-

>ATCC10864_004646-T1 ID=ATCC10864_004646-T1|Name=ATCC10864_004646-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1251bp|location=Sequence derived from alignment at MCQH01000084:75675..76925- (Aspergillus niger ATCC 10864)
ATGCCCCCCTCCCCCTGCGCCCGCTGCCACGACCAACGGGCAGTTATCAT
ACGGCCCAAGAACCGGCAAAAGCTCTGCCGCACCTGCTTCCTGCACGTCT
TCGAGACCGAAGTCCACGAAACCATCACCTCGACCTCTCTCTTCCACCCC
GGCGAACGAGTCGCCATCGGCGCCAGCGGCGGCAAAGACAGCACCGTCCT
GGCCGCCGTCCTCAAGACCCTCAACGAACGCTACAACTATGGACTCGACC
TATGCCTCCTCTCCATCGACGAAGGCATCAAGGGTTACCGCGACGACAGT
CTCGAGACCGTGAAACGCAACGCCCAACAATACAACATGCCGCTCGTAAT
CGTCAGCTACGGCGACCTGTACGGCTGGACAATGGACCAGGTGGTGGCGC
AGGTCGGCAAAAAGGGCAACTGCACATACTGCGGGGTATTTCGGCGGCAG
GCGCTGGATCGCGGGGCCGCAAAACTGGGCATTAAGCATGTGGTGACGGG
TCATAATGCGGACGATGTGGCGGAGACGGTGATGATGAATTTGTTGAGAG
GGGATTTGCCGCGCTTGTCGCGGGGCACGAGTATTGTGACGGGGTCCGCC
GCCAGTGATATTAAGAGGAGTAAGCCGTTGAAGTATGCTTATGAGAAGGA
GATCGTGCTGTATGCGCATCATCGCCAGTTGGATTATTTCTCTACGGAGT
GTATCTATTCGCCTGAGGCGTTTCGGGGTAGTGCGAGGACGTTGATTAAG
GATTTGGAGAAGATTAGGCCGTCGTCGATTTTGGATATTGTTAAGTCTGG
GGAGGATATGGCGCTTCTGGTGCCCGCGGAGGTTAGGGGGAAGGGGGCTG
AGGATGAGGAGGGCGGTGGTGGTGGTGGGTGTGGGAGTCAGAATGGGCGG
ACGAGGGGTGGTGAGATGGCGGAGATGGAGAGGAAGTTGAAGGAGGATGA
GGCTGCCAAAGATAGGGAGATGGAGATTACTTCTGACAGCTTGTCTAGGA
GGCAGCAGCAGCAGCAGTCGGAGCAGATGCAGACGCCGGCTCAAAAGAAG
GTCAAGTCGCAGGTACTGGGGACGTGTGAGCGCTGCGGTTATATCTCCAG
TCAGCGCGTGTGCAAGGCATGTACGCTTCTGGAGGGATTGAATAAGAATC
GGCCCAAGACGGCGATTGAGATGGAGATTGGTTTGGAAGATGAGGAGAGC
AGCTCGACGTTGCGCAGGCAGATGGAGAAGGTTGAGCTGGGGGGTGTTTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
Vocabulary: Biological Process
TermDefinition
GO:0002098tRNA wobble uridine modification
GO:0034227tRNA thio-modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCS6ATCC10864_004646Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004646-T1.cdsATCC10864_004646-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004646-T1.exon1ATCC10864_004646-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004646-T1ATCC10864_004646-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR032442
InterProIPR014729
PFAMPF16503
InterProIPR000541
PFAMPF01171
InterProIPR011063
Properties
Property NameValue
NoteBUSCO:EOG09262IZ6
Productnucleotidyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:75675..76925 -
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