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ATCC10864_004648-T1, ATCC10864_004648-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004648-T1
Unique NameATCC10864_004648-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:79200..79991+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004648-T1 ID=ATCC10864_004648-T1|Name=ATCC10864_004648-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=792bp|location=Sequence derived from alignment at MCQH01000084:79200..79991+ (Aspergillus niger ATCC 10864)
ATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGCCTC
TATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACTGCCG
GCGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCCAGC
GGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAACGAGATCGCCTG
GCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCTACG
CCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCCAGC
ATCCCCTCCACCTGGAAGTGGACGTATGTTGCAGCCTAGACCTTCCGACC
GACCGACCGTCAGGACGCATGCTGACTTTTTGGGAATAGATACTCTGGCT
CCGACATCGTGGCCGACGTGGCCTACGACATGTTCCTGGGCTCGACCGCC
GACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTTGCTGCCCTGGG
CGGTGCTGGCCCCATCTCGTCGACCGGCTCCACCATTGCCACCCCGACGA
TCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACGGCGACACCACC
GTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTCTCCGGCGACCT
GAACGACTTCTTCACCTACCTGGTGGACAACGAGGGTGTCTCTGACAGCC
TGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCACCGGTAGCGAC
GCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAGTAA
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Coding sequence (CDS) from alignment at MCQH01000084:79200..79991+

>ATCC10864_004648-T1 ID=ATCC10864_004648-T1|Name=ATCC10864_004648-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1452bp|location=Sequence derived from alignment at MCQH01000084:79200..79991+ (Aspergillus niger ATCC 10864)
ATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGCCTC
TATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACTGCCG
GCGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCCAGC
GGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAACGAGATCGCCTG
GCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCTACG
CCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCCAGC
ATCCCCTCCACCTGGAAGTGGACATACTCTGGCTCCGACATCGTGGCCGA
CGTGGCCTACGACATGTTCCTGGGCTCGACCGCCGACGCCTCCTCCGATG
AGTACGAGATCATGGTCTGGCTTGCTGCCCTGGGCGGTGCTGGCCCCATC
TCGTCGACCGGCTCCACCATTGCCACCCCGACGATCAACGGCGTGACCTG
GGACCTGTACACCGGCCCCAACGGCGACACCACCGTCTACAGCTTCGTCG
CCCAGTCGACCACCGAGGACTTCTCCGGCGACCTGAACGACTTCTTCACC
TACCTGGTGGACAACGAGGGTGTCTCTGACAGCCTGTACCTGACCACCCT
TGAGGCGGGTACCGAGCCCTTCACCGGTAGCGACGCTGAGCTGAAGGTGT
CCGAGTACTCCGTTTCCATCGAGTAAATGAAGGTTCTCGCTCTTTCCGCT
CTTCTTTCCTTGGCTTCGGCCGCCTCTATCAGCCGCCGTAGCGACTTCTG
CGGCCAATGGGATACCGCCACTGCCGGCGACTTCATCCTGTACAACGACC
TCTGGGGTGAAGACAACGCCTCCAGCGGCTCCCAGTGCACCGGCGTCGAC
TCGGCCAGCGGCAACGAGATCGCCTGGCACACCAGCTGGTCCTGGGAGGG
TGGCAGCAGTGACGTCAAGAGCTACGCCAACGCTGCTCTGCAGTTCACTG
GTACTCAGCTGAGCTCCATCTCCAGCATCCCCTCCACCTGGAAGTGGACA
TACTCTGGCTCCGACATCGTGGCCGACGTGGCCTACGACATGTTCCTGGG
CTCGACCGCCGACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTTG
CTGCCCTGGGCGGTGCTGGCCCCATCTCGTCGACCGGCTCCACCATTGCC
ACCCCGACGATCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACGG
CGACACCACCGTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTCT
CCGGCGACCTGAACGACTTCTTCACCTACCTGGTGGACAACGAGGGTGTC
TCTGACAGCCTGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCAC
CGGTAGCGACGCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAGT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008810cellulase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004648ATCC10864_004648Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004648-T1.exon1ATCC10864_004648-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004648-T1.exon2ATCC10864_004648-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004648-T1.cdsATCC10864_004648-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004648-T1ATCC10864_004648-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013319
InterProIPR002594
PFAMPF01670
InterProIPR013320
Properties
Property NameValue
NoteCAZy:GH12
NoteSECRETED:SignalP(1-15)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:79200..79991 +
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