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ATCC10864_004731-T1, ATCC10864_004731-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004731-T1
Unique NameATCC10864_004731-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:350337..351130+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004731-T1 ID=ATCC10864_004731-T1|Name=ATCC10864_004731-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=794bp|location=Sequence derived from alignment at MCQH01000084:350337..351130+ (Aspergillus niger ATCC 10864)
ATGACAACCCCCAAACCCCACATCGCACACACGCTCCTCTCGCGCGCGCA
CTCCCCCGACACAGCCTCGCAACTCTTCACCGAGCGCATAAAACAAAAGC
CTCTCTACGTGCGTCCCACGTCCCCAACGCCCGCCGACAACCGCTCGCGC
CGGCGCCTCCATCGCCTCCGCAAGAAAGAGTATTTCCTCCGCAAACAAAA
GCCGCAGCCTTTATCCGCGCGTCAGAAGCGCGCCTCGGGCCTCTACAACC
TCCCCAAGGAAGAATGCAAGTATGCGGTTTTCCAGGAGCTGCATGCCATG
TGGGTGCGGTATATGCAGGATATGCTAGACTTGGGGGCAAAGAAATTCAA
GCCGCCGATGACACCGTTGTCGCATGGGAGTAAGCTCTCCAGTGCGGATT
TTCATGGCGCGGAGGTGGAGGTTGTAAGGAGTCGGTGTGAGGGGAGGGTC
GGGGTTAAGGGGATTGTGGTTAGGGATACGAAGTTTACGTTTGTGGTTGT
TACGAGGGGGGATGAGGTTAAGAGTATGTTTTATTCTTTTTCTTGATGAG
GTTTGGTTTGTGTGTTGCTAATGTGGGTGTGAATCTAGCTATTCCGAAGG
AGCAGACTATTTTCCGGTTTAGTGTGCCTTTGCCTGAGGCGGATGATGCT
GATGGCGCGGCGGTGACTGGGGAGACGAGCGCTGATTCTGCTAAGAAGGA
GCTCGTGTTTGAGCTCCATGGCAGTCAGTTCCAGAATCGTCCGGTTGACA
GGGCGAACAAGAAATTCAAATGGCGGAATGTGGATTATATCTAA
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Coding sequence (CDS) from alignment at MCQH01000084:350337..351130+

>ATCC10864_004731-T1 ID=ATCC10864_004731-T1|Name=ATCC10864_004731-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1458bp|location=Sequence derived from alignment at MCQH01000084:350337..351130+ (Aspergillus niger ATCC 10864)
ATGACAACCCCCAAACCCCACATCGCACACACGCTCCTCTCGCGCGCGCA
CTCCCCCGACACAGCCTCGCAACTCTTCACCGAGCGCATAAAACAAAAGC
CTCTCTACGTGCGTCCCACGTCCCCAACGCCCGCCGACAACCGCTCGCGC
CGGCGCCTCCATCGCCTCCGCAAGAAAGAGTATTTCCTCCGCAAACAAAA
GCCGCAGCCTTTATCCGCGCGTCAGAAGCGCGCCTCGGGCCTCTACAACC
TCCCCAAGGAAGAATGCAAGTATGCGGTTTTCCAGGAGCTGCATGCCATG
TGGGTGCGGTATATGCAGGATATGCTAGACTTGGGGGCAAAGAAATTCAA
GCCGCCGATGACACCGTTGTCGCATGGGAGTAAGCTCTCCAGTGCGGATT
TTCATGGCGCGGAGGTGGAGGTTGTAAGGAGTCGGTGTGAGGGGAGGGTC
GGGGTTAAGGGGATTGTGGTTAGGGATACGAAGTTTACGTTTGTGGTTGT
TACGAGGGGGGATGAGGTTAAGACTATTCCGAAGGAGCAGACTATTTTCC
GGTTTAGTGTGCCTTTGCCTGAGGCGGATGATGCTGATGGCGCGGCGGTG
ACTGGGGAGACGAGCGCTGATTCTGCTAAGAAGGAGCTCGTGTTTGAGCT
CCATGGCAGTCAGTTCCAGAATCGTCCGGTTGACAGGGCGAACAAGAAAT
TCAAATGGCGGAATGTGGATTATATCTAAATGACAACCCCCAAACCCCAC
ATCGCACACACGCTCCTCTCGCGCGCGCACTCCCCCGACACAGCCTCGCA
ACTCTTCACCGAGCGCATAAAACAAAAGCCTCTCTACGTGCGTCCCACGT
CCCCAACGCCCGCCGACAACCGCTCGCGCCGGCGCCTCCATCGCCTCCGC
AAGAAAGAGTATTTCCTCCGCAAACAAAAGCCGCAGCCTTTATCCGCGCG
TCAGAAGCGCGCCTCGGGCCTCTACAACCTCCCCAAGGAAGAATGCAAGT
ATGCGGTTTTCCAGGAGCTGCATGCCATGTGGGTGCGGTATATGCAGGAT
ATGCTAGACTTGGGGGCAAAGAAATTCAAGCCGCCGATGACACCGTTGTC
GCATGGGAGTAAGCTCTCCAGTGCGGATTTTCATGGCGCGGAGGTGGAGG
TTGTAAGGAGTCGGTGTGAGGGGAGGGTCGGGGTTAAGGGGATTGTGGTT
AGGGATACGAAGTTTACGTTTGTGGTTGTTACGAGGGGGGATGAGGTTAA
GACTATTCCGAAGGAGCAGACTATTTTCCGGTTTAGTGTGCCTTTGCCTG
AGGCGGATGATGCTGATGGCGCGGCGGTGACTGGGGAGACGAGCGCTGAT
TCTGCTAAGAAGGAGCTCGTGTTTGAGCTCCATGGCAGTCAGTTCCAGAA
TCGTCCGGTTGACAGGGCGAACAAGAAATTCAAATGGCGGAATGTGGATT
ATATCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0033204ribonuclease P RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000172ribonuclease MRP complex
GO:0030677ribonuclease P complex
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0001682tRNA 5'-leader removal
GO:0008033tRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004731ATCC10864_004731Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004731-T1.exon1ATCC10864_004731-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004731-T1.exon2ATCC10864_004731-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004731-T1.cdsATCC10864_004731-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004731-T1ATCC10864_004731-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR023534
InterProIPR002730
PFAMPF01868
InterProIPR036980
InterProIPR023538
InterProIPR016848
Properties
Property NameValue
NoteBUSCO:EOG092644N1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:350337..351130 +
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